Index of /seashell/bu-github/ceabigr/output/11-RNAseq-snps

[ICO]NameLast modifiedSizeDescription

[PARENTDIR]Parent Directory   -  
[   ]S12M.sorted.vcf.gz 2022-02-22 18:48 4.3G 
[   ]S13M.sorted.vcf.gz 2022-02-22 19:33 3.4G 
[   ]S16F.sorted.vcf.gz 2022-02-22 20:33 2.6G 
[   ]S19F.sorted.vcf.gz 2022-02-22 21:24 2.3G 
[   ]S22F.sorted.vcf.gz 2022-02-22 22:22 2.6G 
[   ]S23M.sorted.vcf.gz 2022-02-22 23:18 3.6G 
[   ]S29F.sorted.vcf.gz 2022-02-23 00:06 3.0G 
[   ]S31M.sorted.vcf.gz 2022-02-23 00:57 4.3G 
[   ]S35F.sorted.vcf.gz 2022-02-23 01:39 2.2G 
[   ]S36F.sorted.vcf.gz 2022-02-23 02:24 2.4G 
[   ]S39F.sorted.vcf.gz 2022-02-23 03:13 2.3G 
[   ]S3F.sorted.vcf.gz 2022-02-23 04:01 2.5G 
[   ]S41F.sorted.vcf.gz 2022-02-23 04:50 2.8G 
[   ]S44F.sorted.vcf.gz 2022-02-23 05:44 2.7G 
[   ]S48M.sorted.vcf.gz 2022-02-23 06:58 4.9G 
[   ]S50F.sorted.vcf.gz 2022-02-23 07:43 2.3G 
[   ]S52F.sorted.vcf.gz 2022-02-23 08:36 3.2G 
[   ]S53F.sorted.vcf.gz 2022-02-23 09:20 2.3G 
[   ]S54F.sorted.vcf.gz 2022-02-23 10:06 2.7G 
[   ]S59M.sorted.vcf.gz 2022-02-23 10:54 3.0G 
[   ]S64M.sorted.vcf.gz 2022-02-23 11:47 3.8G 
[   ]S6M.sorted.vcf.gz 2022-02-23 12:44 4.3G 
[   ]S76F.sorted.vcf.gz 2022-02-23 13:34 2.5G 
[   ]S77F.sorted.vcf.gz 2022-02-23 14:29 2.4G 
[   ]S7M.sorted.vcf.gz 2022-02-23 15:23 4.1G 
[   ]S9M.sorted.vcf.gz 2022-02-23 17:03 4.3G 
[   ]S12M.dedup.bam 2022-03-09 11:18 5.8G 
[   ]S13M.dedup.bam 2022-03-09 11:23 4.3G 
[   ]S16F.dedup.bam 2022-03-09 11:28 3.2G 
[   ]S19F.dedup.bam 2022-03-09 11:33 3.1G 
[   ]S22F.dedup.bam 2022-03-09 11:38 3.7G 
[   ]S23M.dedup.bam 2022-03-09 11:46 6.4G 
[   ]S29F.dedup.bam 2022-03-09 11:50 3.4G 
[   ]S31M.dedup.bam 2022-03-09 11:55 4.1G 
[   ]S35F.dedup.bam 2022-03-09 11:59 2.7G 
[   ]S36F.dedup.bam 2022-03-09 12:04 3.0G 
[   ]S39F.dedup.bam 2022-03-09 12:09 3.1G 
[   ]S3F.dedup.bam 2022-03-09 12:13 2.8G 
[   ]S41F.dedup.bam 2022-03-09 12:18 3.2G 
[   ]S44F.dedup.bam 2022-03-09 12:23 3.5G 
[   ]S48M.dedup.bam 2022-03-09 12:35 9.4G 
[   ]S50F.dedup.bam 2022-03-09 12:39 2.7G 
[   ]S52F.dedup.bam 2022-03-09 12:44 3.6G 
[   ]S53F.dedup.bam 2022-03-09 12:49 3.1G 
[   ]S54F.dedup.bam 2022-03-09 12:54 3.3G 
[   ]S59M.dedup.bam 2022-03-09 12:58 3.6G 
[   ]S64M.dedup.bam 2022-03-09 13:04 4.3G 
[   ]S6M.dedup.bam 2022-03-09 13:12 6.3G 
[   ]S76F.dedup.bam 2022-03-09 13:17 3.2G 
[   ]S77F.dedup.bam 2022-03-09 13:23 3.3G 
[   ]S7M.dedup.bam 2022-03-09 13:29 5.0G 
[   ]S9M.dedup.bam 2022-03-09 13:36 6.0G 
[   ]S12M.dedup-split.bam 2022-03-10 11:17 5.6G 
[   ]S13M.dedup-split.bai 2022-03-10 11:58 1.9M 
[   ]S13M.dedup-split.bam 2022-03-10 11:58 4.2G 
[   ]S16F.dedup-split.bai 2022-03-10 12:44 1.8M 
[   ]S16F.dedup-split.bam 2022-03-10 12:44 3.7G 
[   ]S19F.dedup-split.bai 2022-03-10 13:25 1.7M 
[   ]S19F.dedup-split.bam 2022-03-10 13:25 3.7G 
[   ]S22F.dedup-split.bai 2022-03-10 14:16 1.8M 
[   ]S22F.dedup-split.bam 2022-03-10 14:16 4.4G 
[   ]S23M.dedup-split.bai 2022-03-10 15:19 2.0M 
[   ]S23M.dedup-split.bam 2022-03-10 15:19 6.2G 
[   ]S29F.dedup-split.bai 2022-03-10 16:01 1.9M 
[   ]S29F.dedup-split.bam 2022-03-10 16:01 3.8G 
[   ]S31M.dedup-split.bai 2022-03-10 16:40 2.0M 
[   ]S31M.dedup-split.bam 2022-03-10 16:40 4.0G 
[   ]S35F.dedup-split.bai 2022-03-10 17:15 1.7M 
[   ]S35F.dedup-split.bam 2022-03-10 17:15 3.2G 
[   ]S36F.dedup-split.bai 2022-03-10 17:55 1.8M 
[   ]S36F.dedup-split.bam 2022-03-10 17:55 3.5G 
[   ]S39F.dedup-split.bai 2022-03-10 18:37 1.7M 
[   ]S39F.dedup-split.bam 2022-03-10 18:37 3.8G 
[   ]S3F.dedup-split.bai 2022-03-10 19:16 1.7M 
[   ]S3F.dedup-split.bam 2022-03-10 19:16 3.4G 
[   ]S41F.dedup-split.bai 2022-03-10 19:57 1.8M 
[   ]S41F.dedup-split.bam 2022-03-10 19:57 3.7G 
[   ]S44F.dedup-split.bai 2022-03-10 20:44 1.9M 
[   ]S44F.dedup-split.bam 2022-03-10 20:44 4.0G 
[   ]S48M.dedup-split.bai 2022-03-10 22:17 2.2M 
[   ]S48M.dedup-split.bam 2022-03-10 22:17 9.2G 
[   ]S50F.dedup-split.bai 2022-03-10 22:53 1.7M 
[   ]S50F.dedup-split.bam 2022-03-10 22:53 3.2G 
[   ]S52F.dedup-split.bai 2022-03-10 23:36 1.9M 
[   ]S52F.dedup-split.bam 2022-03-10 23:36 4.1G 
[   ]S53F.dedup-split.bai 2022-03-11 00:15 1.8M 
[   ]S53F.dedup-split.bam 2022-03-11 00:15 3.6G 
[   ]S54F.dedup-split.bai 2022-03-11 00:57 1.9M 
[   ]S54F.dedup-split.bam 2022-03-11 00:57 3.8G 
[   ]S59M.dedup-split.bai 2022-03-11 01:38 1.9M 
[   ]S59M.dedup-split.bam 2022-03-11 01:38 3.8G 
[   ]S64M.dedup-split.bai 2022-03-11 02:30 2.6M 
[   ]S64M.dedup-split.bam 2022-03-11 02:30 4.4G 
[   ]S6M.dedup-split.bai 2022-03-11 03:32 2.0M 
[   ]S6M.dedup-split.bam 2022-03-11 03:32 6.2G 
[   ]S76F.dedup-split.bai 2022-03-11 04:13 1.8M 
[   ]S76F.dedup-split.bam 2022-03-11 04:13 3.9G 
[   ]S77F.dedup-split.bai 2022-03-11 04:56 1.8M 
[   ]S77F.dedup-split.bam 2022-03-11 04:56 4.1G 
[   ]S7M.dedup-split.bai 2022-03-11 05:46 2.0M 
[   ]S7M.dedup-split.bam 2022-03-11 05:46 4.9G 
[   ]S9M.dedup-split.bai 2022-03-11 06:40 2.0M 
[   ]S9M.dedup-split.bam 2022-03-11 06:40 5.8G 
[   ]S12M.dedup-split-RG.bam2022-03-11 16:15 5.6G 
[   ]S13M.dedup-split-RG.bam2022-03-11 16:19 4.1G 
[   ]S16F.dedup-split-RG.bam2022-03-11 16:22 3.7G 
[   ]S19F.dedup-split-RG.bam2022-03-11 16:25 3.7G 
[   ]S22F.dedup-split-RG.bam2022-03-11 16:28 4.4G 
[   ]S23M.dedup-split-RG.bam2022-03-11 16:33 6.2G 
[   ]S29F.dedup-split-RG.bam2022-03-11 16:36 3.8G 
[   ]S31M.dedup-split-RG.bam2022-03-11 16:39 4.0G 
[   ]S35F.dedup-split-RG.bam2022-03-11 16:42 3.2G 
[   ]S36F.dedup-split-RG.bam2022-03-11 16:45 3.5G 
[   ]S39F.dedup-split-RG.bam2022-03-11 16:48 3.8G 
[   ]S3F.dedup-split-RG.bam 2022-03-11 16:50 3.4G 
[   ]S41F.dedup-split-RG.bam2022-03-11 16:53 3.7G 
[   ]S44F.dedup-split-RG.bam2022-03-11 16:57 4.0G 
[   ]S48M.dedup-split-RG.bam2022-03-11 17:04 9.2G 
[   ]S50F.dedup-split-RG.bam2022-03-11 17:07 3.2G 
[   ]S52F.dedup-split-RG.bam2022-03-11 17:10 4.1G 
[   ]S53F.dedup-split-RG.bam2022-03-11 17:13 3.6G 
[   ]S54F.dedup-split-RG.bam2022-03-11 17:16 3.8G 
[   ]S59M.dedup-split-RG.bam2022-03-11 17:19 3.8G 
[   ]S64M.dedup-split-RG.bam2022-03-11 17:23 4.4G 
[   ]S6M.dedup-split-RG.bam 2022-03-11 17:28 6.2G 
[   ]S76F.dedup-split-RG.bam2022-03-11 17:31 3.9G 
[   ]S77F.dedup-split-RG.bam2022-03-11 17:34 4.1G 
[   ]S7M.dedup-split-RG.bam 2022-03-11 17:38 4.9G 
[   ]S9M.dedup-split-RG.bam 2022-03-11 17:42 5.8G 
[   ]S12M.dedup-split-RG...>2022-03-13 10:09 1.7M 
[   ]S13M.dedup-split-RG...>2022-03-13 10:11 1.4M 
[   ]S16F.dedup-split-RG...>2022-03-13 10:12 1.1M 
[   ]S19F.dedup-split-RG...>2022-03-13 10:13 1.0M 
[   ]S22F.dedup-split-RG...>2022-03-13 10:14 1.1M 
[   ]S23M.dedup-split-RG...>2022-03-13 10:16 1.7M 
[   ]S29F.dedup-split-RG...>2022-03-13 10:17 1.1M 
[   ]S31M.dedup-split-RG...>2022-03-13 10:18 1.4M 
[   ]S35F.dedup-split-RG...>2022-03-13 10:19 1.0M 
[   ]S36F.dedup-split-RG...>2022-03-13 10:20 1.0M 
[   ]S39F.dedup-split-RG...>2022-03-13 10:21 1.0M 
[   ]S3F.dedup-split-RG.b..>2022-03-13 10:22 1.0M 
[   ]S41F.dedup-split-RG...>2022-03-13 10:23 1.1M 
[   ]S44F.dedup-split-RG...>2022-03-13 10:24 1.2M 
[   ]S48M.dedup-split-RG...>2022-03-13 10:26 2.0M 
[   ]S50F.dedup-split-RG...>2022-03-13 10:27 1.0M 
[   ]S52F.dedup-split-RG...>2022-03-13 10:28 1.1M 
[   ]S53F.dedup-split-RG...>2022-03-13 10:29 1.0M 
[   ]S54F.dedup-split-RG...>2022-03-13 10:30 1.1M 
[   ]S59M.dedup-split-RG...>2022-03-13 10:31 1.1M 
[   ]S64M.dedup-split-RG...>2022-03-13 10:33 1.9M 
[   ]S6M.dedup-split-RG.b..>2022-03-13 10:34 1.7M 
[   ]S76F.dedup-split-RG...>2022-03-13 10:35 1.1M 
[   ]S77F.dedup-split-RG...>2022-03-13 10:36 1.1M 
[   ]S7M.dedup-split-RG.b..>2022-03-13 10:38 1.6M 
[   ]S9M.dedup-split-RG.b..>2022-03-13 10:39 1.7M 
[TXT]S12M.variants.g.vcf 2022-03-18 08:58 5.0G 
[TXT]S12M.variants.g.vcf.idx2022-03-18 08:58 14M 
[TXT]S13M.variants.g.vcf 2022-03-18 20:49 3.7G 
[TXT]S13M.variants.g.vcf.idx2022-03-18 20:49 10M 
[TXT]S16F.variants.g.vcf 2022-03-19 05:16 1.9G 
[TXT]S16F.variants.g.vcf.idx2022-03-19 05:16 5.4M 
[TXT]S19F.variants.g.vcf 2022-03-19 12:26 1.7G 
[TXT]S19F.variants.g.vcf.idx2022-03-19 12:26 4.6M 
[TXT]S22F.variants.g.vcf 2022-03-19 20:50 1.9G 
[TXT]S22F.variants.g.vcf.idx2022-03-19 20:50 5.3M 
[TXT]S23M.variants.g.vcf 2022-03-20 15:00 5.1G 
[TXT]S23M.variants.g.vcf.idx2022-03-20 15:00 14M 
[TXT]S29F.variants.g.vcf 2022-03-21 00:29 2.6G 
[TXT]S29F.variants.g.vcf.idx2022-03-21 00:29 7.4M 
[TXT]S31M.variants.g.vcf 2022-03-21 14:30 4.4G 
[TXT]S31M.variants.g.vcf.idx2022-03-21 14:30 12M 
[TXT]S35F.variants.g.vcf 2022-03-21 20:55 1.6G 
[TXT]S35F.variants.g.vcf.idx2022-03-21 20:55 4.6M 
[TXT]S36F.variants.g.vcf 2022-03-22 03:59 1.8G 
[TXT]S36F.variants.g.vcf.idx2022-03-22 03:59 5.0M 
[TXT]S39F.variants.g.vcf 2022-03-22 11:16 1.7G 
[TXT]S39F.variants.g.vcf.idx2022-03-22 11:16 4.7M 
[TXT]S3F.variants.g.vcf 2022-03-22 18:12 1.8G 
[TXT]S3F.variants.g.vcf.idx 2022-03-22 18:12 5.1M 
[TXT]S41F.variants.g.vcf 2022-03-23 02:29 2.3G 
[TXT]S41F.variants.g.vcf.idx2022-03-23 02:29 6.4M 
[TXT]S44F.variants.g.vcf 2022-03-23 11:30 2.2G 
[TXT]S44F.variants.g.vcf.idx2022-03-23 11:30 6.2M 
[TXT]S48M.variants.g.vcf 2022-03-24 14:40 6.2G 
[TXT]S48M.variants.g.vcf.idx2022-03-24 14:40 17M 
[TXT]S50F.variants.g.vcf 2022-03-24 21:18 1.7G 
[TXT]S50F.variants.g.vcf.idx2022-03-24 21:18 4.8M 
[TXT]S52F.variants.g.vcf 2022-03-25 07:55 2.9G 
[TXT]S52F.variants.g.vcf.idx2022-03-25 07:55 8.0M 
[TXT]S53F.variants.g.vcf 2022-03-25 15:14 1.8G 
[TXT]S53F.variants.g.vcf.idx2022-03-25 15:14 5.1M 
[TXT]S54F.variants.g.vcf 2022-03-25 23:31 2.3G 
[TXT]S54F.variants.g.vcf.idx2022-03-25 23:31 6.5M 
[TXT]S59M.variants.g.vcf 2022-03-26 08:42 3.0G 
[TXT]S59M.variants.g.vcf.idx2022-03-26 08:42 8.4M 
[TXT]S64M.variants.g.vcf 2022-03-26 20:18 3.6G 
[TXT]S64M.variants.g.vcf.idx2022-03-26 20:18 10M 
[TXT]S6M.variants.g.vcf 2022-03-27 16:32 5.2G 
[TXT]S6M.variants.g.vcf.idx 2022-03-27 16:32 14M 
[TXT]S76F.variants.g.vcf 2022-03-28 00:11 1.9G 
[TXT]S76F.variants.g.vcf.idx2022-03-28 00:11 5.4M 
[TXT]S77F.variants.g.vcf 2022-03-28 08:01 1.7G 
[TXT]S77F.variants.g.vcf.idx2022-03-28 08:01 4.8M 
[TXT]S7M.variants.g.vcf 2022-03-29 00:59 4.6G 
[TXT]S7M.variants.g.vcf.idx 2022-03-29 00:59 13M 
[TXT]S9M.variants.g.vcf 2022-03-29 20:04 5.1G 
[TXT]S9M.variants.g.vcf.idx 2022-03-29 20:04 14M 
[   ]Cv_ceabigr.vcf.gz 2022-03-31 17:47 3.4G 
[   ]Cv_ceabigr.vcf.gz.tbi 2022-03-31 17:47 861K 
[   ]Cv_ceabigr-filtered...>2022-04-01 12:31 3.4G 
[   ]Cv_ceabigr-filtered...>2022-04-01 12:31 861K 
[   ]Cv_ceabigr-filtered-..>2022-04-01 12:43 213M 
[   ]Cv_ceabigr-filtered-..>2022-04-01 12:43 566K 
[TXT]S12M.dedup-split.bai 2022-04-11 11:19 0  
[TXT]index-bams.txt 2022-04-11 11:19 0  
[DIR]GenomicsDB/ 2022-06-11 10:18 -  
[   ]Cv-rnaseq_genotypes...>2022-06-13 13:40 3.4G 
[   ]Cv-rnaseq_genotypes...>2022-06-13 13:40 861K 
[TXT]GenotypeGVCFs_stout.txt2022-06-13 13:40 543K 
[   ]Cv-rnaseq_genotypes-..>2022-06-13 15:44 3.4G 
[   ]Cv-rnaseq_genotypes-..>2022-06-13 15:44 861K 
[TXT]Genotype_filter_stou..>2022-06-13 15:44 5.1G 
[   ]Cv-rnaseq_genotypes-..>2022-06-15 08:29 213M 
[   ]Cv-rnaseq_genotypes-..>2022-06-15 08:29 566K 
[TXT]SelectVariants_stout..>2022-06-15 08:29 4.8K 
[TXT]AddReadGroup_stout.txt 2024-06-06 09:14 355K 
[TXT]CigarNSplit_stout.txt 2024-06-06 09:14 3.2K 
[TXT]CreateSequenceDictio..>2024-06-06 09:14 1.6K 
[   ]Cv_intervals.bed 2024-06-06 09:14 251  
[TXT]GenomicsDBImport_sto..>2024-06-06 09:14 19K 
[TXT]HaplotypeCaller_stou..>2024-06-06 09:14 3.3M 
[TXT]S3F.dup_metrics.txt 2024-06-06 09:14 18K 
[TXT]S6M.dup_metrics.txt 2024-06-06 09:14 3.6K 
[TXT]S12M.dup_metrics.txt 2024-06-06 09:14 3.6K 
[TXT]S13M.dup_metrics.txt 2024-06-06 09:14 3.8K 
[TXT]S16F.dup_metrics.txt 2024-06-06 09:14 11K 
[TXT]S19F.dup_metrics.txt 2024-06-06 09:14 18K 
[TXT]S22F.dup_metrics.txt 2024-06-06 09:14 18K 
[TXT]S23M.dup_metrics.txt 2024-06-06 09:14 3.6K 
[TXT]S29F.dup_metrics.txt 2024-06-06 09:14 13K 
[TXT]S31M.dup_metrics.txt 2024-06-06 09:14 3.6K 
[TXT]S35F.dup_metrics.txt 2024-06-06 09:14 15K 
[TXT]S36F.dup_metrics.txt 2024-06-06 09:14 15K 
[TXT]S39F.dup_metrics.txt 2024-06-06 09:14 19K 
[TXT]S41F.dup_metrics.txt 2024-06-06 09:14 14K 
[TXT]S44F.dup_metrics.txt 2024-06-06 09:14 13K 
[TXT]S48M.dup_metrics.txt 2024-06-06 09:14 3.6K 
[TXT]S50F.dup_metrics.txt 2024-06-06 09:14 16K 
[TXT]S52F.dup_metrics.txt 2024-06-06 09:14 12K 
[TXT]S53F.dup_metrics.txt 2024-06-06 09:14 16K 
[TXT]S54F.dup_metrics.txt 2024-06-06 09:14 16K 
[TXT]S59M.dup_metrics.txt 2024-06-06 09:14 11K 
[TXT]S64M.dup_metrics.txt 2024-06-06 09:14 18K 
[TXT]S7M.dup_metrics.txt 2024-06-06 09:14 3.9K 
[TXT]S9M.dup_metrics.txt 2024-06-06 09:14 3.6K 
[TXT]S76F.dup_metrics.txt 2024-06-06 09:14 22K 
[TXT]S77F.dup_metrics.txt 2024-06-06 09:14 21K 
[   ]intervals.bed 2024-06-06 09:14 251  
[TXT]sample_map.txt 2024-06-06 09:14 642