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| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| AUTHORS | 2018-06-13 23:12 | 2.1K | |
| INSTALL | 2018-06-13 23:12 | 247 | |
| Makefile | 2018-06-13 23:12 | 2.0K | |
| R/ | 2018-06-13 23:12 | - | |
| RES/ | 2018-06-13 23:12 | - | |
| abc.cpp | 2018-06-13 23:12 | 3.6K | |
| abc.d | 2018-06-13 23:13 | 972 | |
| abc.h | 2018-06-13 23:12 | 638 | |
| abc.o | 2018-06-13 23:13 | 7.1K | |
| abcAncError.cpp | 2018-06-13 23:12 | 6.0K | |
| abcAncError.d | 2018-06-13 23:13 | 458 | |
| abcAncError.h | 2018-06-13 23:12 | 593 | |
| abcAncError.o | 2018-06-13 23:13 | 14K | |
| abcAncestry.cpp | 2018-06-13 23:12 | 1.1K | |
| abcAncestry.d | 2018-06-13 23:14 | 458 | |
| abcAncestry.h | 2018-06-13 23:12 | 416 | |
| abcAncestry.o | 2018-06-13 23:14 | 8.3K | |
| abcAsso.cpp | 2018-06-13 23:12 | 27K | |
| abcAsso.d | 2018-06-13 23:13 | 517 | |
| abcAsso.h | 2018-06-13 23:12 | 1.5K | |
| abcAsso.o | 2018-06-13 23:13 | 40K | |
| abcCallGenotypes.cpp | 2018-06-13 23:12 | 8.1K | |
| abcCallGenotypes.d | 2018-06-13 23:13 | 534 | |
| abcCallGenotypes.h | 2018-06-13 23:12 | 676 | |
| abcCallGenotypes.o | 2018-06-13 23:13 | 16K | |
| abcCounts.cpp | 2018-06-13 23:12 | 19K | |
| abcCounts.d | 2018-06-13 23:13 | 507 | |
| abcCounts.h | 2018-06-13 23:12 | 1.2K | |
| abcCounts.o | 2018-06-13 23:13 | 27K | |
| abcCovar.cpp | 2018-06-13 23:12 | 6.5K | |
| abcCovar.d | 2018-06-13 23:13 | 459 | |
| abcCovar.h | 2018-06-13 23:12 | 447 | |
| abcCovar.o | 2018-06-13 23:13 | 13K | |
| abcDstat.cpp | 2018-06-13 23:12 | 13K | |
| abcDstat.d | 2018-06-13 23:13 | 504 | |
| abcDstat.h | 2018-06-13 23:12 | 854 | |
| abcDstat.o | 2018-06-13 23:13 | 20K | |
| abcDstat2.cpp | 2018-06-13 23:12 | 17K | |
| abcDstat2.d | 2018-06-13 23:13 | 507 | |
| abcDstat2.h | 2018-06-13 23:12 | 1.0K | |
| abcDstat2.o | 2018-06-13 23:13 | 22K | |
| abcError.cpp | 2018-06-13 23:12 | 17K | |
| abcError.d | 2018-06-13 23:13 | 469 | |
| abcError.h | 2018-06-13 23:12 | 1.3K | |
| abcError.o | 2018-06-13 23:13 | 29K | |
| abcFilter.cpp | 2018-06-13 23:12 | 4.8K | |
| abcFilter.d | 2018-06-13 23:13 | 468 | |
| abcFilter.h | 2018-06-13 23:12 | 639 | |
| abcFilter.o | 2018-06-13 23:13 | 11K | |
| abcFilterSNP.cpp | 2018-06-13 23:12 | 11K | |
| abcFilterSNP.d | 2018-06-13 23:13 | 556 | |
| abcFilterSNP.h | 2018-06-13 23:12 | 467 | |
| abcFilterSNP.o | 2018-06-13 23:13 | 23K | |
| abcFreq.cpp | 2018-06-13 23:12 | 44K | |
| abcFreq.d | 2018-06-13 23:14 | 538 | |
| abcFreq.h | 2018-06-13 23:12 | 2.6K | |
| abcFreq.o | 2018-06-13 23:14 | 74K | |
| abcGL.cpp | 2018-06-13 23:12 | 14K | |
| abcGL.d | 2018-06-13 23:13 | 612 | |
| abcGL.h | 2018-06-13 23:12 | 1.1K | |
| abcGL.o | 2018-06-13 23:13 | 36K | |
| abcGetFasta.cpp | 2018-06-13 23:12 | 5.2K | |
| abcGetFasta.d | 2018-06-13 23:13 | 514 | |
| abcGetFasta.h | 2018-06-13 23:12 | 1.2K | |
| abcGetFasta.o | 2018-06-13 23:13 | 14K | |
| abcHWE.cpp | 2018-06-13 23:12 | 7.1K | |
| abcHWE.d | 2018-06-13 23:14 | 511 | |
| abcHWE.h | 2018-06-13 23:12 | 828 | |
| abcHWE.o | 2018-06-13 23:14 | 17K | |
| abcHWE_F.cpp | 2018-06-13 23:12 | 7.2K | |
| abcHWE_F.d | 2018-06-13 23:13 | 517 | |
| abcHWE_F.h | 2018-06-13 23:12 | 754 | |
| abcHWE_F.o | 2018-06-13 23:13 | 17K | |
| abcHaploCall.cpp | 2018-06-13 23:12 | 5.2K | |
| abcHaploCall.d | 2018-06-13 23:13 | 519 | |
| abcHaploCall.h | 2018-06-13 23:12 | 655 | |
| abcHaploCall.o | 2018-06-13 23:13 | 13K | |
| abcHetPlas.cpp | 2018-06-13 23:12 | 8.5K | |
| abcHetPlas.d | 2018-06-13 23:14 | 455 | |
| abcHetPlas.h | 2018-06-13 23:12 | 466 | |
| abcHetPlas.o | 2018-06-13 23:14 | 19K | |
| abcIBS.cpp | 2018-06-13 23:12 | 11K | |
| abcIBS.d | 2018-06-13 23:13 | 501 | |
| abcIBS.h | 2018-06-13 23:12 | 1.1K | |
| abcIBS.o | 2018-06-13 23:13 | 18K | |
| abcMajorMinor.cpp | 2018-06-13 23:12 | 14K | |
| abcMajorMinor.d | 2018-06-13 23:13 | 489 | |
| abcMajorMinor.h | 2018-06-13 23:12 | 541 | |
| abcMajorMinor.o | 2018-06-13 23:13 | 19K | |
| abcMismatch.cpp | 2018-06-13 23:12 | 4.1K | |
| abcMismatch.d | 2018-06-13 23:14 | 519 | |
| abcMismatch.h | 2018-06-13 23:12 | 440 | |
| abcMismatch.o | 2018-06-13 23:14 | 13K | |
| abcPSMC.cpp | 2018-06-13 23:12 | 4.5K | |
| abcPSMC.d | 2018-06-13 23:13 | 501 | |
| abcPSMC.h | 2018-06-13 23:12 | 711 | |
| abcPSMC.o | 2018-06-13 23:13 | 15K | |
| abcSaf.cpp | 2018-06-13 23:12 | 52K | |
| abcSaf.d | 2018-06-13 23:13 | 511 | |
| abcSaf.h | 2018-06-13 23:12 | 1.9K | |
| abcSaf.o | 2018-06-13 23:13 | 60K | |
| abcScounts.cpp | 2018-06-13 23:12 | 3.4K | |
| abcScounts.d | 2018-06-13 23:13 | 455 | |
| abcScounts.h | 2018-06-13 23:12 | 436 | |
| abcScounts.o | 2018-06-13 23:13 | 18K | |
| abcSmartCounts.cpp | 2018-06-13 23:12 | 3.7K | |
| abcSmartCounts.d | 2018-06-13 23:13 | 467 | |
| abcSmartCounts.h | 2018-06-13 23:12 | 462 | |
| abcSmartCounts.o | 2018-06-13 23:13 | 12K | |
| abcSnpTools.cpp | 2018-06-13 23:12 | 1.4K | |
| abcSnpTools.d | 2018-06-13 23:13 | 458 | |
| abcSnpTools.h | 2018-06-13 23:12 | 381 | |
| abcSnpTools.o | 2018-06-13 23:13 | 8.0K | |
| abcTemplate.cpp | 2018-06-13 23:12 | 24K | |
| abcTemplate.d | 2018-06-13 23:14 | 458 | |
| abcTemplate.h | 2018-06-13 23:12 | 433 | |
| abcTemplate.o | 2018-06-13 23:14 | 28K | |
| abcWriteFasta.cpp | 2018-06-13 23:12 | 7.5K | |
| abcWriteFasta.d | 2018-06-13 23:13 | 525 | |
| abcWriteFasta.h | 2018-06-13 23:12 | 687 | |
| abcWriteFasta.o | 2018-06-13 23:13 | 19K | |
| abcWritePlink.cpp | 2018-06-13 23:12 | 5.2K | |
| abcWritePlink.d | 2018-06-13 23:13 | 544 | |
| abcWritePlink.h | 2018-06-13 23:12 | 376 | |
| abcWritePlink.o | 2018-06-13 23:13 | 14K | |
| abcWriteVcf.cpp | 2018-06-13 23:12 | 5.4K | |
| abcWriteVcf.d | 2018-06-13 23:13 | 564 | |
| abcWriteVcf.h | 2018-06-13 23:12 | 470 | |
| abcWriteVcf.o | 2018-06-13 23:13 | 14K | |
| analysisFunction.cpp | 2018-06-13 23:12 | 30K | |
| analysisFunction.d | 2018-06-13 23:13 | 448 | |
| analysisFunction.h | 2018-06-13 23:12 | 3.4K | |
| analysisFunction.o | 2018-06-13 23:13 | 50K | |
| ancestral_likes.cpp | 2018-06-13 23:12 | 16K | |
| ancestral_likes.d | 2018-06-13 23:14 | 464 | |
| ancestral_likes.h | 2018-06-13 23:12 | 3.5K | |
| ancestral_likes.o | 2018-06-13 23:14 | 177K | |
| angsd | 2018-06-13 23:14 | 2.8M | |
| angsd.cpp | 2018-06-13 23:12 | 9.3K | |
| angsd.d | 2018-06-13 23:14 | 567 | |
| angsd.o | 2018-06-13 23:14 | 17K | |
| argStruct.h | 2018-06-13 23:12 | 1.0K | |
| bam_likes.cpp | 2018-06-13 23:12 | 8.6K | |
| bam_likes.d | 2018-06-13 23:13 | 616 | |
| bam_likes.h | 2018-06-13 23:12 | 102 | |
| bam_likes.o | 2018-06-13 23:13 | 9.6K | |
| bambi_interface.h | 2018-06-13 23:12 | 1.1K | |
| bammer_main.cpp | 2018-06-13 23:12 | 6.0K | |
| bammer_main.d | 2018-06-13 23:13 | 630 | |
| bammer_main.h | 2018-06-13 23:12 | 34 | |
| bammer_main.o | 2018-06-13 23:13 | 15K | |
| beagleReader.cpp | 2018-06-13 23:12 | 4.0K | |
| beagleReader.d | 2018-06-13 23:13 | 455 | |
| beagleReader.h | 2018-06-13 23:12 | 370 | |
| beagleReader.o | 2018-06-13 23:13 | 6.9K | |
| bfgs.cpp | 2018-06-13 23:12 | 185K | |
| bfgs.d | 2018-06-13 23:13 | 24 | |
| bfgs.h | 2018-06-13 23:12 | 2.2K | |
| bfgs.o | 2018-06-13 23:13 | 64K | |
| chisquare.cpp | 2018-06-13 23:12 | 6.1K | |
| chisquare.d | 2018-06-13 23:13 | 39 | |
| chisquare.h | 2018-06-13 23:12 | 1.5K | |
| chisquare.o | 2018-06-13 23:13 | 20K | |
| cigstat.cpp | 2018-06-13 23:12 | 2.1K | |
| cigstat.d | 2018-06-13 23:13 | 495 | |
| cigstat.h | 2018-06-13 23:12 | 136 | |
| cigstat.o | 2018-06-13 23:13 | 5.5K | |
| doc/ | 2018-06-13 23:12 | - | |
| fet.c | 2018-06-13 23:12 | 3.1K | |
| fet.d | 2018-06-13 23:13 | 13 | |
| fet.o | 2018-06-13 23:13 | 5.1K | |
| filterStrandBias.cpp | 2018-06-13 23:12 | 832 | |
| filterStrandBias.d | 2018-06-13 23:13 | 454 | |
| filterStrandBias.o | 2018-06-13 23:13 | 6.4K | |
| from_samtools.c | 2018-06-13 23:12 | 1.6K | |
| from_samtools.d | 2018-06-13 23:13 | 169 | |
| from_samtools.h | 2018-06-13 23:12 | 371 | |
| from_samtools.o | 2018-06-13 23:13 | 9.2K | |
| gatk_likes.cpp | 2018-06-13 23:12 | 2.1K | |
| gatk_likes.d | 2018-06-13 23:14 | 47 | |
| gatk_likes.h | 2018-06-13 23:12 | 90 | |
| gatk_likes.o | 2018-06-13 23:14 | 4.8K | |
| glfReader.cpp | 2018-06-13 23:12 | 1.8K | |
| glfReader.d | 2018-06-13 23:13 | 446 | |
| glfReader.h | 2018-06-13 23:12 | 282 | |
| glfReader.o | 2018-06-13 23:13 | 4.5K | |
| glfReader_text.cpp | 2018-06-13 23:12 | 2.5K | |
| glfReader_text.d | 2018-06-13 23:13 | 461 | |
| glfReader_text.h | 2018-06-13 23:12 | 358 | |
| glfReader_text.o | 2018-06-13 23:13 | 5.8K | |
| kprobaln.c | 2018-06-13 23:12 | 10K | |
| kprobaln.d | 2018-06-13 23:13 | 34 | |
| kprobaln.h | 2018-06-13 23:12 | 1.5K | |
| kprobaln.o | 2018-06-13 23:13 | 8.0K | |
| ksort.h | 2018-06-13 23:12 | 9.9K | |
| mUpPile.cpp | 2018-06-13 23:12 | 44K | |
| mUpPile.d | 2018-06-13 23:13 | 633 | |
| mUpPile.h | 2018-06-13 23:12 | 370 | |
| mUpPile.o | 2018-06-13 23:13 | 60K | |
| makeReadPool.cpp | 2018-06-13 23:12 | 10K | |
| makeReadPool.d | 2018-06-13 23:13 | 354 | |
| makeReadPool.h | 2018-06-13 23:12 | 1.0K | |
| makeReadPool.o | 2018-06-13 23:13 | 9.2K | |
| malloc_wrap.c | 2018-06-13 23:12 | 1.4K | |
| malloc_wrap.d | 2018-06-13 23:13 | 43 | |
| malloc_wrap.h | 2018-06-13 23:12 | 1.2K | |
| malloc_wrap.o | 2018-06-13 23:13 | 3.2K | |
| misc/ | 2018-06-13 23:14 | - | |
| mpileup.cpp | 2018-06-13 23:12 | 4.8K | |
| mpileup.d | 2018-06-13 23:13 | 629 | |
| mpileup.h | 2018-06-13 23:12 | 279 | |
| mpileup.o | 2018-06-13 23:13 | 7.9K | |
| multiReader.cpp | 2018-06-13 23:12 | 14K | |
| multiReader.d | 2018-06-13 23:13 | 572 | |
| multiReader.h | 2018-06-13 23:12 | 824 | |
| multiReader.o | 2018-06-13 23:13 | 28K | |
| parseArgs_bambi.cpp | 2018-06-13 23:12 | 9.8K | |
| parseArgs_bambi.d | 2018-06-13 23:14 | 609 | |
| parseArgs_bambi.h | 2018-06-13 23:12 | 102 | |
| parseArgs_bambi.o | 2018-06-13 23:14 | 21K | |
| phys_genolike_calc.cpp | 2018-06-13 23:12 | 13K | |
| phys_genolike_calc.d | 2018-06-13 23:14 | 87 | |
| phys_genolike_calc.h | 2018-06-13 23:12 | 1.5K | |
| phys_genolike_calc.o | 2018-06-13 23:14 | 31K | |
| phys_likes.cpp | 2018-06-13 23:12 | 2.6K | |
| phys_likes.d | 2018-06-13 23:14 | 470 | |
| phys_likes.h | 2018-06-13 23:12 | 135 | |
| phys_likes.o | 2018-06-13 23:14 | 6.4K | |
| pooled_alloc.c | 2018-06-13 23:12 | 4.5K | |
| pooled_alloc.d | 2018-06-13 23:13 | 46 | |
| pooled_alloc.h | 2018-06-13 23:12 | 2.1K | |
| pooled_alloc.o | 2018-06-13 23:13 | 2.8K | |
| pop1_read.cpp | 2018-06-13 23:12 | 4.1K | |
| pop1_read.d | 2018-06-13 23:13 | 671 | |
| pop1_read.h | 2018-06-13 23:12 | 273 | |
| pop1_read.o | 2018-06-13 23:13 | 5.9K | |
| prep_sites.cpp | 2018-06-13 23:12 | 17K | |
| prep_sites.d | 2018-06-13 23:14 | 449 | |
| prep_sites.h | 2018-06-13 23:12 | 599 | |
| prep_sites.o | 2018-06-13 23:14 | 35K | |
| printRes.cpp | 2018-06-13 23:12 | 2.2K | |
| printRes.d | 2018-06-13 23:13 | 354 | |
| printRes.h | 2018-06-13 23:12 | 716 | |
| printRes.o | 2018-06-13 23:13 | 4.6K | |
| scripts/ | 2018-06-13 23:12 | - | |
| shared.cpp | 2018-06-13 23:12 | 13K | |
| shared.d | 2018-06-13 23:13 | 841 | |
| shared.h | 2018-06-13 23:12 | 1.3K | |
| shared.o | 2018-06-13 23:13 | 21K | |
| simple_likes.cpp | 2018-06-13 23:12 | 1.8K | |
| simple_likes.d | 2018-06-13 23:14 | 455 | |
| simple_likes.h | 2018-06-13 23:12 | 128 | |
| simple_likes.o | 2018-06-13 23:14 | 4.0K | |
| soap_likes.cpp | 2018-06-13 23:12 | 14K | |
| soap_likes.d | 2018-06-13 23:13 | 449 | |
| soap_likes.h | 2018-06-13 23:12 | 658 | |
| soap_likes.o | 2018-06-13 23:13 | 24K | |
| test/ | 2018-06-13 23:12 | - | |
| vcfReader.cpp | 2018-06-13 23:12 | 6.6K | |
| vcfReader.d | 2018-06-13 23:13 | 443 | |
| vcfReader.h | 2018-06-13 23:12 | 401 | |
| vcfReader.o | 2018-06-13 23:13 | 9.1K | |
| version.h | 2018-06-13 23:13 | 42 | |