GO-terms Semantic Similarity Measures

---

Documentation for package ‘GOSemSim’ version 2.24.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

GOSemSim-package	Gene Ontology-based Sematic Similarity Measures
clusterSim	Semantic Similarity Between Two Gene Clusters
combineScores	combining similarity matrix to similarity score
geneSim	Semantic Similarity Between two Genes
GO	Information content of GO terms
godata	godata
GOSemSim	Gene Ontology-based Sematic Similarity Measures
GOSemSimDATA-class	Class "GOSemSimDATA" This class stores IC and gene to go mapping for semantic similarity measurement
goSim	Semantic Similarity Between Two GO Terms
gotbl	Information content of GO terms
go_term_table	Information content of GO terms
infoContentMethod	information content based methods
load_OrgDb	load_OrgDb
mclusterSim	Pairwise Semantic Similarities for a List of Gene Clusters
mgeneSim	Pairwise Semantic Similarity for a List of Genes
mgoSim	Semantic Similarity Between two GO terms lists
show-method	Class "GOSemSimDATA" This class stores IC and gene to go mapping for semantic similarity measurement
tcss_cutoff	determine the topological cutoff for TCSS method
termSim	termSim
wangMethod_internal	wangMethod