Package: GOSemSim Type: Package Title: GO-terms Semantic Similarity Measures Version: 2.24.0 Authors@R: c( person(given = "Guangchuang", family = "Yu", email = "guangchuangyu@gmail.com", role = c("aut", "cre")), person(given = "Alexey", family = "Stukalov", email = "astukalov@gmail.com", role = "ctb"), person(given= "Pingfan", family = "Guo", email = "1178431277@qq.com", role = "ctb"), person(given = "Chuanle", family = "Xiao", email = "xiaochuanle@126.com", role = "ctb"), person(given = "Lluís", family = "Revilla Sancho", email = "lluis.revilla@gmail.com", role = "ctb") ) Maintainer: Guangchuang Yu Description: The semantic comparisons of Gene Ontology (GO) annotations provide quantitative ways to compute similarities between genes and gene groups, and have became important basis for many bioinformatics analysis approaches. GOSemSim is an R package for semantic similarity computation among GO terms, sets of GO terms, gene products and gene clusters. GOSemSim implemented five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively. Depends: R (>= 3.5.0) LinkingTo: Rcpp Imports: AnnotationDbi, GO.db, methods, utils Suggests: AnnotationHub, BiocManager, clusterProfiler, DOSE, knitr, rmarkdown, org.Hs.eg.db, prettydoc, testthat, ROCR VignetteBuilder: knitr ByteCompile: true License: Artistic-2.0 Encoding: UTF-8 URL: https://yulab-smu.top/biomedical-knowledge-mining-book/ BugReports: https://github.com/YuLab-SMU/GOSemSim/issues Packaged: 2022-11-01 21:39:59 UTC; biocbuild biocViews: Annotation, GO, Clustering, Pathways, Network, Software RoxygenNote: 7.2.1 git_url: https://git.bioconductor.org/packages/GOSemSim git_branch: RELEASE_3_16 git_last_commit: ed7334f git_last_commit_date: 2022-11-01 Date/Publication: 2022-11-01 NeedsCompilation: yes Author: Guangchuang Yu [aut, cre], Alexey Stukalov [ctb], Pingfan Guo [ctb], Chuanle Xiao [ctb], Lluís Revilla Sancho [ctb] Built: R 4.2.3; x86_64-pc-linux-gnu; 2023-05-07 19:44:31 UTC; unix