Index of /kdurkin1/ravenbackups/deep-dive-expression/F-Ptuh/code

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory   -  
[ ]00.00-F-Ptuh-WGBS-re..>2025-02-11 11:09 7.3K 
[ ]00.00-F-Ptuh-WGBS-re..>2025-02-11 11:09 19K 
[TXT]00.00-genome-GFF-for..>2025-01-28 14:08 8.0K 
[TXT]00.00-genome-GFF-for..>2025-01-28 14:08 1.0M 
[ ]00.00-genome-GFF-for..>2025-01-28 14:08 22K 
[TXT]01-Ptuh-RNA-trimming..>2024-09-25 12:47 8.6K 
[TXT]01-Ptuh-RNA-trimming..>2024-09-25 12:47 1.0M 
[ ]01-Ptuh-RNA-trimming..>2024-09-25 12:47 17K 
[ ]01.00-F-Ptuh-WGBS-tr..>2025-04-11 12:20 4.1K 
[TXT]01.00-F-Ptuh-WGBS-tr..>2025-04-11 12:20 3.9K 
[ ]01.00-F-Ptuh-WGBS-tr..>2025-05-05 23:44 6.5K 
[TXT]01.00-F-Ptuh-WGBS-tr..>2025-05-05 23:44 9.5K 
[TXT]02-Ptuh-reference-an..>2024-09-25 12:47 9.9K 
[TXT]02-Ptuh-reference-an..>2024-09-25 12:47 14M 
[TXT]02-Ptuh-reference-an..>2024-09-25 12:47 12M 
[DIR]02-Ptuh-reference-an..>2024-09-25 12:47 -  
[ ]03-Ptuh-RNA-summary.Rmd2024-09-25 12:47 7.6K 
[TXT]03-Ptuh-RNA-summary...>2024-09-25 12:47 1.3M 
[ ]03-Ptuh-RNA-summary.md 2024-09-25 12:47 18K 
[DIR]03-Ptuh-RNA-summary_..>2024-09-25 12:47 -  
[ ]03.1-Ptuh-sRNA-summa..>2024-11-11 16:50 31K 
[TXT]03.1-Ptuh-sRNA-summa..>2024-11-11 16:50 3.6M 
[ ]03.1-Ptuh-sRNA-summa..>2024-11-11 16:50 39K 
[DIR]03.1-Ptuh-sRNA-summa..>2024-11-11 16:50 -  
[DIR]03.1-Ptuh-sRNA-summa..>2024-11-11 16:50 -  
[ ]03.2-Ptuh-lncRNA-sum..>2025-07-29 12:50 14K 
[ ]03.2-Ptuh-lncRNA-sum..>2025-07-29 12:50 19K 
[DIR]03.2-Ptuh-lncRNA-sum..>2025-05-06 00:37 -  
[DIR]03.2-Ptuh-lncRNA-sum..>2025-05-06 00:37 -  
[TXT]04-Ptuh-genome-explo..>2024-10-17 12:52 5.8K 
[ ]04-Ptuh-genome-explo..>2024-10-08 16:01 1.1K 
[ ]05-Ptuh-sRNA-ShortSt..>2025-06-20 13:41 16K 
[TXT]05-Ptuh-sRNA-ShortSt..>2024-10-22 17:58 1.6M 
[ ]05-Ptuh-sRNA-ShortSt..>2025-06-20 13:41 27K 
[DIR]05-Ptuh-sRNA-ShortSt..>2024-10-22 17:42 -  
[DIR]05-Ptuh-sRNA-ShortSt..>2024-10-22 17:42 -  
[TXT]05.1-Ptuh-sRNA-Short..>2025-02-21 11:21 3.1K 
[TXT]06-Ptuh-Hisat.qmd 2024-11-11 15:45 8.3K 
[TXT]06.2-Ptuh-Hisat.qmd 2025-02-21 11:21 8.2K 
[TXT]08-Ptuh-lncRNA-matri..>2025-01-28 14:08 1.5K 
[ ]09-Ptuh-mixOmics.Rmd 2025-01-28 14:08 4.5K 
[ ]10-Ptuh-mRNA-lncRNA-..>2025-02-07 08:49 12K 
[ ]10-Ptuh-mRNA-lncRNA-..>2025-02-07 08:49 42K 
[DIR]10-Ptuh-mRNA-lncRNA-..>2025-02-07 08:49 -  
[ ]10.1-Ptuh-mRNA-lncRN..>2025-10-09 13:59 9.2K 
[TXT]10.1-Ptuh-mRNA-lncRN..>2025-10-09 13:59 9.4K 
[DIR]10.1-Ptuh-mRNA-lncRN..>2025-08-06 07:55 -  
[ ]11-Ptuh-mRNA-miRNA-i..>2025-06-19 16:29 12K 
[TXT]11-Ptuh-mRNA-miRNA-i..>2025-06-19 16:29 14K 
[DIR]11-Ptuh-mRNA-miRNA-i..>2025-06-19 16:29 -  
[TXT]11.01-Ptuh-mRNA-miRN..>2025-06-19 16:40 12K 
[ ]11.01-Ptuh-mRNA-miRN..>2025-06-19 16:40 17K 
[ ]11.1-Ptuh-mRNA-miRNA..>2025-02-11 11:09 28K 
[TXT]11.2-Ptuh-known-miRN..>2025-02-11 11:09 84K 
[TXT]11.11-Ptuh-mRNA-miRN..>2025-07-11 04:18 33K 
[ ]11.11-Ptuh-mRNA-miRN..>2025-07-11 04:19 116K 
[DIR]11.11-Ptuh-mRNA-miRN..>2025-07-11 04:19 -  
[TXT]11.12-Ptuh-mRNA-miRN..>2025-07-11 04:22 33K 
[ ]11.12-Ptuh-mRNA-miRN..>2025-07-11 04:23 163K 
[DIR]11.12-Ptuh-mRNA-miRN..>2025-07-11 04:23 -  
[TXT]11.13-Ptuh-mRNA-miRN..>2025-07-11 04:29 33K 
[ ]11.13-Ptuh-mRNA-miRN..>2025-07-11 04:30 162K 
[DIR]11.13-Ptuh-mRNA-miRN..>2025-07-11 04:30 -  
[ ]11.14-Ptuh-mRNA-miRN..>2025-08-06 05:43 34K 
[ ]11.14-Ptuh-mRNA-miRN..>2025-08-06 05:43 200K 
[DIR]11.14-Ptuh-mRNA-miRN..>2025-08-06 05:43 -  
[TXT]12-Ptuh-WGBS.Rmd 2025-10-03 18:47 38K 
[TXT]12-Ptuh-WGBS.md 2025-10-03 18:47 50K 
[DIR]12-Ptuh-WGBS_files/ 2025-10-03 18:47 -  
[TXT]12-Ptuh-methylation.qmd2025-02-21 11:21 4.9K 
[ ]13-Ptuh-mRNA-GO-enri..>2025-06-17 13:17 9.9K 
[TXT]14-Ptuh-miRNA-lncRNA..>2025-06-23 15:28 16K 
[TXT]14-Ptuh-miRNA-lncRNA..>2025-06-23 15:28 38K 
[DIR]14-Ptuh-miRNA-lncRNA..>2025-06-19 11:27 -  
[TXT]15-Ptuh-miRNA-lncRNA..>2025-10-09 14:07 12K 
[TXT]15-Ptuh-miRNA-lncRNA..>2025-10-09 14:07 14K 
[DIR]15-Ptuh-miRNA-lncRNA..>2025-06-19 19:06 -  
[TXT]16-Ptuh-annotate-UTR..>2025-06-18 16:44 9.0K 
[TXT]16-Ptuh-annotate-UTR..>2025-06-18 16:44 16K 
[ ]17-Ptuh-lncRNA.Rmd 2025-06-23 12:16 12K 
[TXT]18-Ptuh-lncRNA-matri..>2025-06-23 12:16 1.7K 
[TXT]30.00-Ptua-transcrip..>2025-06-23 12:16 14K 
[ ]30.00-Ptua-transcrip..>2025-06-23 12:16 47K 
[TXT]31-Ptuh-miRNA-lncRNA..>2025-12-04 19:35 20K 
[TXT]31-Ptuh-miRNA-lncRNA..>2025-12-04 19:35 25K 
[DIR]31-Ptuh-miRNA-lncRNA..>2025-07-18 07:26 -  
[TXT]31.1-Ptuh-ceRNA-netw..>2025-10-19 13:39 9.0K 
[TXT]31.1-Ptuh-ceRNA-netw..>2025-10-19 13:39 11K 
[TXT]32-Ptuh-ncRNA-machin..>2026-04-28 11:52 5.9K 
[TXT]32-Ptuh-ncRNA-machin..>2026-04-28 11:52 6.4K 
[TXT]33-Ptuh-epi-machiner..>2026-04-28 15:01 3.3K 
[TXT]33-Ptuh-epi-machiner..>2026-04-28 15:01 3.6K 
[ ]references.bib 2025-02-07 08:49 460