Index of /kdurkin1/ravenbackups/deep-dive-expression/D-Apul/code

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory   -  
[DIR]02-Apul-reference-an..>2024-12-16 07:08 -  
[DIR]02-Apul-reference-an..>2025-02-20 11:21 -  
[DIR]03-Apul-RNA-summary_..>2024-09-25 17:06 -  
[DIR]03-Apul-RNA-summary_..>2025-02-20 11:21 -  
[DIR]03.01-Apul-RNA-summa..>2025-02-07 12:10 -  
[DIR]03.01-Apul-RNA-summa..>2025-02-20 11:21 -  
[DIR]03.1-Apul-sRNA-summa..>2024-11-11 14:48 -  
[DIR]03.1-Apul-sRNA-summa..>2025-02-20 11:21 -  
[DIR]03.2-Apul-lncRNA-sum..>2025-07-29 12:07 -  
[DIR]03.2-Apul-lncRNA-sum..>2025-06-17 13:04 -  
[DIR]04-Apul-RNA-sRNA-WGC..>2025-02-20 11:21 -  
[DIR]08-Apul-WGBS_files/ 2025-10-08 18:02 -  
[DIR]09-Apul-mRNA-miRNA-i..>2025-06-19 14:41 -  
[DIR]09.1-Apul-mRNA-miRNA..>2025-04-15 18:23 -  
[DIR]09.11-Apul-mRNA-miRN..>2025-07-16 07:58 -  
[DIR]09.12-Apul-mRNA-miRN..>2025-07-16 07:58 -  
[DIR]09.13-Apul-mRNA-miRN..>2025-08-05 11:59 -  
[DIR]11-Apul-sRNA-ShortSt..>2024-10-22 14:09 -  
[DIR]11-Apul-sRNA-ShortSt..>2025-02-20 11:21 -  
[DIR]16-Apul-RNAhybrid_fi..>2025-02-20 11:21 -  
[DIR]17-Apul-miRNA-lncRNA..>2025-02-20 11:21 -  
[DIR]21-Apul-mRNA-lncRNA-..>2025-02-20 11:21 -  
[DIR]21.1-Apul-mRNA-lncRN..>2025-07-16 14:47 -  
[DIR]24-Apul-miRanda-inpu..>2025-02-20 11:21 -  
[DIR]28-Apul-miRNA-lncRNA..>2025-06-19 17:49 -  
[DIR]33-Apul-miRNA-mRNA-l..>2025-07-29 11:58 -  
[TXT]siRNA-reads-to-genom..>2025-03-14 12:02 0  
[TXT]siRNA-reads-to-genom..>2025-03-14 12:02 0  
[ ]13-Apul-miRNA-naming..>2025-02-20 11:21 697  
[ ]12-Apul-genome-explo..>2025-02-20 11:21 1.1K 
[TXT]19-Apul-lncRNA-matri..>2025-02-20 11:21 1.3K 
[TXT]32-Apul-lncRNA-matri..>2025-06-23 14:09 1.6K 
[ ]genome-stats.sh 2025-02-20 11:21 1.9K 
[ ]references.bib 2025-06-23 14:09 2.7K 
[TXT]09-Apul-mirTarRnaSeq..>2024-10-04 12:19 3.6K 
[TXT]01.00-D-Apul-WGBS-tr..>2025-04-15 18:23 3.6K 
[ ]01.00-D-Apul-WGBS-tr..>2025-04-15 18:23 3.8K 
[TXT]11.1-Apul-sRNA-Short..>2025-02-20 11:21 4.1K 
[TXT]14-Apul-RepeatMasker..>2025-02-20 11:21 4.3K 
[ ]05-Apul-mixOmics.Rmd 2025-02-20 11:21 4.5K 
[TXT]12-Apul-genome-explo..>2025-02-20 11:21 5.3K 
[TXT]7.2-Apul-Hisat.qmd 2025-02-20 11:21 5.4K 
[TXT]23-Apul-miRNA-methyl..>2025-02-20 11:21 5.4K 
[TXT]22-Apul-methylation.qmd2025-02-20 11:21 5.8K 
[TXT]22.2-Apul-methylatio..>2025-02-20 11:21 5.8K 
[TXT]22.3-Apul-methylatio..>2025-02-20 11:21 5.8K 
[TXT]18-Apul-interactions..>2025-02-20 11:21 6.4K 
[ ]01.00-D-Apul-WGBS-tr..>2025-06-17 13:04 6.5K 
[ ]08.1-Apul-WGBS-simda..>2025-04-11 12:20 6.8K 
[ ]00.00-D-Apul-WGBS-re..>2025-02-20 11:21 7.3K 
[TXT]23-Apul-miRNA-methyl..>2025-02-20 11:21 7.7K 
[TXT]27-Apul-pheno-annot.qmd2025-04-15 18:23 8.2K 
[ ]04-Apul-RNA-sRNA-WGC..>2025-02-20 11:21 8.3K 
[TXT]01-Apul-RNA-trimming..>2025-02-20 11:21 8.5K 
[TXT]10.1-Apul-lncRNA.qmd 2025-02-20 11:21 8.5K 
[TXT]15-Apul-annotate-UTR..>2025-02-20 11:21 8.6K 
[TXT]07-Apul-Hisat.qmd 2025-02-20 11:21 8.9K 
[TXT]10-Apul-lncRNA.qmd 2025-02-20 11:21 8.9K 
[TXT]01.00-D-Apul-WGBS-tr..>2025-06-17 13:04 9.7K 
[ ]21.1-Apul-mRNA-lncRN..>2025-10-08 19:57 9.7K 
[TXT]25-lncRNA-pipeline.qmd 2025-02-26 15:08 10K 
[ ]20-Apul-Orthofinder.Rmd2025-02-20 11:21 10K 
[TXT]21.1-Apul-mRNA-lncRN..>2025-10-08 19:58 11K 
[TXT]29-Apul-mRNA-GO-enri..>2025-06-17 13:04 11K 
[TXT]28-Apul-miRNA-lncRNA..>2025-10-08 18:02 12K 
[TXT]09.01-Apul-mRNA-miRN..>2025-06-19 16:24 12K 
[ ]21-Apul-mRNA-lncRNA-..>2025-02-27 11:27 12K 
[TXT]15-Apul-annotate-UTR..>2025-02-20 11:21 13K 
[TXT]20-Apul-Orthofinder.md 2025-02-20 11:21 13K 
[ ]03.2-Apul-lncRNA-sum..>2025-08-06 14:55 14K 
[TXT]28-Apul-miRNA-lncRNA..>2025-10-08 18:02 14K 
[ ]31-Apul-lncRNA.Rmd 2025-10-08 18:02 14K 
[TXT]30.00-Apul-transcrip..>2025-06-19 13:40 14K 
[ ]26-Apul-siRNA-mRNA-i..>2025-04-15 18:23 16K 
[ ]03.01-Apul-RNA-summa..>2025-02-20 11:21 16K 
[ ]03-Apul-RNA-summary.Rmd2025-02-20 11:21 16K 
[ ]09.01-Apul-mRNA-miRN..>2025-06-19 16:24 16K 
[ ]11-Apul-sRNA-ShortSt..>2025-06-23 14:09 16K 
[ ]01-Apul-RNA-trimming..>2025-02-20 11:21 16K 
[ ]00.00-D-Apul-WGBS-re..>2025-02-20 11:21 19K 
[TXT]16-Apul-RNAhybrid.Rmd 2025-02-20 11:21 19K 
[TXT]33-Apul-miRNA-mRNA-l..>2025-10-16 18:47 19K 
[TXT]02-Apul-reference-an..>2025-02-20 11:21 19K 
[TXT]26-Apul-siRNA-mRNA-i..>2025-04-15 18:23 20K 
[TXT]24-Apul-miRanda-inpu..>2025-02-26 15:08 21K 
[TXT]09-Apul-mRNA-miRNA-i..>2025-06-19 14:41 21K 
[ ]03.2-Apul-lncRNA-sum..>2025-08-06 14:55 22K 
[ ]03.01-Apul-RNA-summa..>2025-02-20 11:21 22K 
[TXT]16-Apul-RNAhybrid.md 2025-02-20 11:21 23K 
[TXT]33-Apul-miRNA-mRNA-l..>2025-10-16 18:47 24K 
[ ]04-Apul-RNA-sRNA-WGC..>2025-02-20 11:21 26K 
[ ]11-Apul-sRNA-ShortSt..>2025-06-23 14:09 27K 
[ ]03-Apul-RNA-summary.md 2025-02-20 11:21 28K 
[ ]24-Apul-miRanda-inpu..>2025-02-26 15:08 28K 
[TXT]17-Apul-miRNA-lncRNA..>2025-07-03 11:36 30K 
[ ]03.1-Apul-sRNA-summa..>2025-02-20 11:21 31K 
[TXT]18-Apul-interactions..>2025-02-20 11:21 31K 
[TXT]09.11-Apul-mRNA-miRN..>2025-07-16 07:58 34K 
[TXT]09.12-Apul-mRNA-miRN..>2025-07-16 07:58 34K 
[ ]09.1-Apul-mRNA-miRNA..>2025-07-16 07:58 34K 
[ ]21-Apul-mRNA-lncRNA-..>2025-02-20 11:21 35K 
[TXT]08-Apul-WGBS.Rmd 2025-10-08 18:02 37K 
[ ]09.13-Apul-mRNA-miRN..>2025-08-05 12:16 37K 
[ ]03.1-Apul-sRNA-summa..>2025-02-20 11:21 39K 
[TXT]08-Apul-WGBS.md 2025-10-08 18:02 48K 
[ ]30.00-Apul-transcrip..>2025-06-19 13:40 53K 
[TXT]17-Apul-miRNA-lncRNA..>2025-07-03 11:36 59K 
[TXT]09-Apul-mRNA-miRNA-i..>2025-06-19 14:41 74K 
[ ]09.12-Apul-mRNA-miRN..>2025-07-16 07:58 244K 
[ ]09.1-Apul-mRNA-miRNA..>2025-07-16 07:58 251K 
[ ]09.11-Apul-mRNA-miRN..>2025-07-16 07:58 356K 
[ ]09.13-Apul-mRNA-miRN..>2025-08-05 12:19 358K 
[TXT]09.1-Apul-mRNA-miRNA..>2025-07-16 07:58 704K 
[TXT]15-Apul-annotate-UTR..>2025-02-20 11:21 1.0M 
[TXT]01-Apul-RNA-trimming..>2025-02-20 11:21 1.0M 
[TXT]18-Apul-interactions..>2025-02-20 11:21 1.1M 
[TXT]17-Apul-miRNA-lncRNA..>2025-02-11 11:10 1.1M 
[TXT]16-Apul-RNAhybrid.html 2025-02-20 11:21 1.4M 
[TXT]11-Apul-sRNA-ShortSt..>2024-10-22 17:00 1.7M 
[TXT]03-Apul-RNA-summary...>2025-02-20 11:21 1.8M 
[TXT]04-Apul-RNA-sRNA-WGC..>2025-02-20 11:21 1.8M 
[TXT]03.1-Apul-sRNA-summa..>2025-02-20 11:21 3.8M 
[TXT]02-Apul-reference-an..>2025-02-20 11:21 9.8M 
[TXT]02-Apul-reference-an..>2024-12-16 07:31 11M