SRR18245606.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 33948940 lines in total Total number of methylation call strings processed: 67897880 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1576341648 Total methylated C's in CpG context: 24624810 Total methylated C's in CHG context: 6964694 Total methylated C's in CHH context: 31223057 Total C to T conversions in CpG context: 170317674 Total C to T conversions in CHG context: 260204887 Total C to T conversions in CHH context: 1083006526 C methylated in CpG context: 12.6% C methylated in non-CpG context: 2.8%