SRR18245605.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 31932262 lines in total Total number of methylation call strings processed: 63864524 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1479085210 Total methylated C's in CpG context: 23459888 Total methylated C's in CHG context: 6614723 Total methylated C's in CHH context: 29605464 Total C to T conversions in CpG context: 160770215 Total C to T conversions in CHG context: 244886599 Total C to T conversions in CHH context: 1013748321 C methylated in CpG context: 12.7% C methylated in non-CpG context: 2.8%