SRR18245604.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 42448280 lines in total Total number of methylation call strings processed: 84896560 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1515402531 Total methylated C's in CpG context: 24045281 Total methylated C's in CHG context: 7489953 Total methylated C's in CHH context: 31398713 Total C to T conversions in CpG context: 182345710 Total C to T conversions in CHG context: 258792249 Total C to T conversions in CHH context: 1011330625 C methylated in CpG context: 11.7% C methylated in non-CpG context: 3.0%