SRR18245603.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 42688801 lines in total Total number of methylation call strings processed: 85377602 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1577618471 Total methylated C's in CpG context: 24249886 Total methylated C's in CHG context: 7454851 Total methylated C's in CHH context: 31574193 Total C to T conversions in CpG context: 185579099 Total C to T conversions in CHG context: 266995052 Total C to T conversions in CHH context: 1061765390 C methylated in CpG context: 11.6% C methylated in non-CpG context: 2.9%