CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 42454 858320 4.71 900774 2 122665 1018569 10.75 1141234 3 96594 661600 12.74 758194 4 88039 903835 8.88 991874 5 100072 889216 10.12 989288 6 115615 1078282 9.68 1193897 7 107174 892856 10.72 1000030 8 100445 867462 10.38 967907 9 93670 838311 10.05 931981 10 89901 802158 10.08 892059 11 87266 822803 9.59 910069 12 85436 780882 9.86 866318 13 85604 788739 9.79 874343 14 87739 814442 9.73 902181 15 88148 826770 9.63 914918 16 89026 842743 9.55 931769 17 90081 848912 9.59 938993 18 92279 861289 9.68 953568 19 91575 854809 9.68 946384 20 92404 860860 9.69 953264 21 92317 860428 9.69 952745 22 91222 854176 9.65 945398 23 91824 851763 9.73 943587 24 92458 855516 9.75 947974 25 90608 846703 9.67 937311 26 90350 845243 9.66 935593 27 91172 850703 9.68 941875 28 91137 852233 9.66 943370 29 91050 852519 9.65 943569 30 91958 854990 9.71 946948 31 90358 852127 9.59 942485 32 90928 847900 9.69 938828 33 91422 853663 9.67 945085 34 90549 846458 9.66 937007 35 91099 848672 9.69 939771 36 91054 854159 9.63 945213 37 89825 846944 9.59 936769 38 90583 848290 9.65 938873 39 90565 856011 9.57 946576 40 90623 850643 9.63 941266 41 91074 850247 9.68 941321 42 91607 857351 9.65 948958 43 90762 848308 9.67 939070 44 91240 848314 9.71 939554 45 90510 847154 9.65 937664 46 90192 847191 9.62 937383 47 90683 847987 9.66 938670 48 90614 854991 9.58 945605 49 90908 849865 9.66 940773 50 91094 847923 9.70 939017 51 91684 849462 9.74 941146 52 90656 847232 9.67 937888 53 91335 847588 9.73 938923 54 90910 852336 9.64 943246 55 89951 842449 9.65 932400 56 90510 840706 9.72 931216 57 91115 846848 9.71 937963 58 89994 842363 9.65 932357 59 90205 844117 9.65 934322 60 91158 848574 9.70 939732 61 90275 840830 9.70 931105 62 90750 843560 9.71 934310 63 90664 846251 9.68 936915 64 90228 842634 9.67 932862 65 90401 839759 9.72 930160 66 90914 842897 9.74 933811 67 90845 836187 9.80 927032 68 90421 839393 9.72 929814 69 90600 839015 9.75 929615 70 90369 836542 9.75 926911 71 90587 838693 9.75 929280 72 90897 841344 9.75 932241 73 90224 836320 9.74 926544 74 90691 838775 9.76 929466 75 90682 840979 9.73 931661 76 89948 837654 9.70 927602 77 91471 838795 9.83 930266 78 91113 836811 9.82 927924 79 90250 832610 9.78 922860 80 90371 833648 9.78 924019 81 90579 834467 9.79 925046 82 90020 833331 9.75 923351 83 90256 832282 9.78 922538 84 91011 834702 9.83 925713 85 90541 833176 9.80 923717 86 90547 829269 9.84 919816 87 90840 832932 9.83 923772 88 90035 827866 9.81 917901 89 89741 824712 9.81 914453 90 90461 827872 9.85 918333 91 90396 826605 9.86 917001 92 90068 821521 9.88 911589 93 90008 826296 9.82 916304 94 90655 822521 9.93 913176 95 90921 823771 9.94 914692 96 90905 826088 9.91 916993 97 90484 823453 9.90 913937 98 91057 822423 9.97 913480 99 90694 821728 9.94 912422 100 90810 818224 9.99 909034 101 90242 816050 9.96 906292 102 90992 819996 9.99 910988 103 89898 814487 9.94 904385 104 90495 813973 10.01 904468 105 90572 818292 9.97 908864 106 90701 811686 10.05 902387 107 90257 810594 10.02 900851 108 90754 813929 10.03 904683 109 89815 804784 10.04 894599 110 90505 805005 10.11 895510 111 91173 806678 10.15 897851 112 90855 804558 10.15 895413 113 91148 803211 10.19 894359 114 90933 804942 10.15 895875 115 90166 800205 10.13 890371 116 90568 798333 10.19 888901 117 91858 798858 10.31 890716 118 91129 796394 10.27 887523 119 90134 791955 10.22 882089 120 91350 796817 10.29 888167 121 90688 791172 10.28 881860 122 90293 789503 10.26 879796 123 90866 786279 10.36 877145 124 90878 785924 10.36 876802 125 90421 782556 10.36 872977 126 91726 783842 10.48 875568 127 90843 778164 10.45 869007 128 90765 778249 10.44 869014 129 90522 777259 10.43 867781 130 90564 772165 10.50 862729 131 90897 773752 10.51 864649 132 91265 768597 10.61 859862 133 90838 767362 10.58 858200 134 91015 766024 10.62 857039 135 91620 764742 10.70 856362 136 90982 764679 10.63 855661 137 90815 758815 10.69 849630 138 91246 756608 10.76 847854 139 90697 752031 10.76 842728 140 91061 748257 10.85 839318 141 90921 748161 10.84 839082 142 90248 743137 10.83 833385 143 90858 740407 10.93 831265 144 90566 740328 10.90 830894 145 90527 736952 10.94 827479 146 91026 734075 11.03 825101 147 91850 735545 11.10 827395 148 89635 728187 10.96 817822 149 89884 725270 11.03 815154 150 87376 695515 11.16 782891 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 12914 1770090 0.72 1783004 2 11791 1209825 0.97 1221616 3 6700 995896 0.67 1002596 4 5787 1244387 0.46 1250174 5 7239 1465601 0.49 1472840 6 7096 1373310 0.51 1380406 7 6557 1181029 0.55 1187586 8 5741 1162973 0.49 1168714 9 5638 1136567 0.49 1142205 10 5237 1135516 0.46 1140753 11 5166 1161455 0.44 1166621 12 5225 1172219 0.44 1177444 13 5086 1173770 0.43 1178856 14 5158 1179715 0.44 1184873 15 5233 1201058 0.43 1206291 16 5255 1214053 0.43 1219308 17 5474 1225653 0.44 1231127 18 5326 1223784 0.43 1229110 19 5463 1224964 0.44 1230427 20 5380 1228461 0.44 1233841 21 5410 1231537 0.44 1236947 22 5478 1225162 0.45 1230640 23 5459 1219391 0.45 1224850 24 5496 1215311 0.45 1220807 25 5674 1214144 0.47 1219818 26 5579 1213773 0.46 1219352 27 5831 1222301 0.47 1228132 28 5680 1219812 0.46 1225492 29 5889 1219565 0.48 1225454 30 5983 1225634 0.49 1231617 31 5993 1223892 0.49 1229885 32 5989 1224212 0.49 1230201 33 6066 1226470 0.49 1232536 34 6134 1223302 0.50 1229436 35 6058 1218533 0.49 1224591 36 6156 1228666 0.50 1234822 37 5865 1226166 0.48 1232031 38 6197 1230446 0.50 1236643 39 6301 1230783 0.51 1237084 40 6372 1227588 0.52 1233960 41 6423 1224713 0.52 1231136 42 6455 1229234 0.52 1235689 43 6375 1222308 0.52 1228683 44 6456 1220341 0.53 1226797 45 6351 1220856 0.52 1227207 46 6412 1218789 0.52 1225201 47 6471 1220196 0.53 1226667 48 6578 1225269 0.53 1231847 49 6772 1222542 0.55 1229314 50 7009 1216259 0.57 1223268 51 6818 1223408 0.55 1230226 52 6863 1217914 0.56 1224777 53 7024 1221998 0.57 1229022 54 6940 1221320 0.57 1228260 55 7024 1216597 0.57 1223621 56 7099 1211576 0.58 1218675 57 7041 1215437 0.58 1222478 58 7243 1215558 0.59 1222801 59 7275 1213227 0.60 1220502 60 7306 1223733 0.59 1231039 61 7338 1222470 0.60 1229808 62 7448 1219843 0.61 1227291 63 7472 1222508 0.61 1229980 64 7823 1215454 0.64 1223277 65 7544 1209909 0.62 1217453 66 7841 1209535 0.64 1217376 67 7875 1210148 0.65 1218023 68 7930 1208823 0.65 1216753 69 8044 1212618 0.66 1220662 70 7926 1208869 0.65 1216795 71 7998 1205495 0.66 1213493 72 8137 1211115 0.67 1219252 73 8158 1206284 0.67 1214442 74 8548 1208318 0.70 1216866 75 8394 1210142 0.69 1218536 76 8449 1209606 0.69 1218055 77 8615 1202363 0.71 1210978 78 8693 1206172 0.72 1214865 79 8821 1202021 0.73 1210842 80 8852 1199063 0.73 1207915 81 8913 1203094 0.74 1212007 82 9083 1197427 0.75 1206510 83 8951 1196660 0.74 1205611 84 9261 1203474 0.76 1212735 85 9185 1198868 0.76 1208053 86 9226 1197546 0.76 1206772 87 9345 1194509 0.78 1203854 88 9509 1191419 0.79 1200928 89 9724 1193225 0.81 1202949 90 9693 1193058 0.81 1202751 91 9807 1185907 0.82 1195714 92 10154 1183350 0.85 1193504 93 10001 1190178 0.83 1200179 94 10184 1190230 0.85 1200414 95 10310 1186096 0.86 1196406 96 10520 1189941 0.88 1200461 97 10662 1183140 0.89 1193802 98 10832 1178691 0.91 1189523 99 11105 1181495 0.93 1192600 100 11176 1176299 0.94 1187475 101 11305 1174039 0.95 1185344 102 11469 1173386 0.97 1184855 103 11462 1169279 0.97 1180741 104 11719 1170049 0.99 1181768 105 11988 1170835 1.01 1182823 106 12196 1168891 1.03 1181087 107 12317 1163653 1.05 1175970 108 12494 1165883 1.06 1178377 109 13045 1161688 1.11 1174733 110 12926 1162618 1.10 1175544 111 13373 1162186 1.14 1175559 112 13337 1158657 1.14 1171994 113 13717 1152530 1.18 1166247 114 14000 1152029 1.20 1166029 115 14164 1146694 1.22 1160858 116 14452 1145374 1.25 1159826 117 14790 1147468 1.27 1162258 118 14972 1144800 1.29 1159772 119 15340 1141842 1.33 1157182 120 15943 1141316 1.38 1157259 121 15964 1133944 1.39 1149908 122 16485 1132183 1.44 1148668 123 16497 1135936 1.43 1152433 124 17150 1129271 1.50 1146421 125 17425 1126598 1.52 1144023 126 17698 1127229 1.55 1144927 127 18045 1122531 1.58 1140576 128 18362 1118029 1.62 1136391 129 18748 1115617 1.65 1134365 130 18981 1111694 1.68 1130675 131 19288 1106472 1.71 1125760 132 19643 1108298 1.74 1127941 133 19914 1101398 1.78 1121312 134 20320 1098321 1.82 1118641 135 20738 1095510 1.86 1116248 136 21084 1089412 1.90 1110496 137 21196 1083960 1.92 1105156 138 21627 1081301 1.96 1102928 139 22125 1077810 2.01 1099935 140 22081 1074063 2.01 1096144 141 22659 1072107 2.07 1094766 142 23051 1070533 2.11 1093584 143 23300 1061470 2.15 1084770 144 24222 1061189 2.23 1085411 145 24848 1061735 2.29 1086583 146 25793 1055688 2.38 1081481 147 26152 1054376 2.42 1080528 148 26880 1045124 2.51 1072004 149 34352 1045968 3.18 1080320 150 30287 990675 2.97 1020962 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 22935 4729141 0.48 4752076 2 51063 4008999 1.26 4060062 3 23581 3548866 0.66 3572447 4 22974 4524866 0.51 4547840 5 24998 4766792 0.52 4791790 6 24095 4748328 0.50 4772423 7 23824 4229679 0.56 4253503 8 21666 4393349 0.49 4415015 9 21850 4518950 0.48 4540800 10 20301 4559891 0.44 4580192 11 20193 4766873 0.42 4787066 12 19415 4776483 0.40 4795898 13 19099 4772391 0.40 4791490 14 19294 4788400 0.40 4807694 15 19774 4778876 0.41 4798650 16 20218 4735830 0.43 4756048 17 20817 4727903 0.44 4748720 18 21408 4770894 0.45 4792302 19 21735 4771810 0.45 4793545 20 21892 4774633 0.46 4796525 21 22295 4786836 0.46 4809131 22 22589 4743643 0.47 4766232 23 22968 4736153 0.48 4759121 24 23765 4764077 0.50 4787842 25 24346 4770321 0.51 4794667 26 24633 4775143 0.51 4799776 27 25390 4795301 0.53 4820691 28 25459 4785452 0.53 4810911 29 25719 4806559 0.53 4832278 30 26017 4839987 0.53 4866004 31 25415 4816683 0.52 4842098 32 25623 4814130 0.53 4839753 33 25397 4836906 0.52 4862303 34 24923 4806928 0.52 4831851 35 24887 4812543 0.51 4837430 36 24744 4833117 0.51 4857861 37 24791 4820305 0.51 4845096 38 24802 4819563 0.51 4844365 39 24762 4841579 0.51 4866341 40 25200 4827358 0.52 4852558 41 25217 4821582 0.52 4846799 42 25173 4839059 0.52 4864232 43 25430 4817183 0.53 4842613 44 25818 4810410 0.53 4836228 45 26033 4816880 0.54 4842913 46 25990 4808680 0.54 4834670 47 26162 4806768 0.54 4832930 48 26380 4823039 0.54 4849419 49 26696 4804192 0.55 4830888 50 26939 4802279 0.56 4829218 51 27310 4821312 0.56 4848622 52 27483 4810667 0.57 4838150 53 27408 4802212 0.57 4829620 54 28096 4814085 0.58 4842181 55 28154 4801177 0.58 4829331 56 28391 4789544 0.59 4817935 57 28778 4823394 0.59 4852172 58 28921 4811515 0.60 4840436 59 29088 4803589 0.60 4832677 60 29594 4816977 0.61 4846571 61 29757 4793332 0.62 4823089 62 29876 4796430 0.62 4826306 63 30394 4800735 0.63 4831129 64 30434 4775931 0.63 4806365 65 30739 4776888 0.64 4807627 66 30856 4787325 0.64 4818181 67 30857 4773137 0.64 4803994 68 31719 4780613 0.66 4812332 69 32065 4791987 0.66 4824052 70 32096 4786831 0.67 4818927 71 32583 4782926 0.68 4815509 72 33302 4786876 0.69 4820178 73 33033 4777445 0.69 4810478 74 33421 4775696 0.69 4809117 75 33698 4779833 0.70 4813531 76 34062 4764290 0.71 4798352 77 34340 4759430 0.72 4793770 78 34864 4774436 0.72 4809300 79 35166 4753615 0.73 4788781 80 35338 4744197 0.74 4779535 81 36210 4757711 0.76 4793921 82 36369 4744525 0.76 4780894 83 36681 4736923 0.77 4773604 84 36941 4755210 0.77 4792151 85 37475 4730197 0.79 4767672 86 37207 4728271 0.78 4765478 87 38259 4740984 0.80 4779243 88 38725 4732647 0.81 4771372 89 39329 4729016 0.82 4768345 90 39747 4733585 0.83 4773332 91 40152 4713469 0.84 4753621 92 40984 4708547 0.86 4749531 93 41521 4718276 0.87 4759797 94 41532 4697460 0.88 4738992 95 42131 4695619 0.89 4737750 96 43231 4704844 0.91 4748075 97 43259 4687127 0.91 4730386 98 44292 4683942 0.94 4728234 99 44966 4687720 0.95 4732686 100 45329 4676806 0.96 4722135 101 46498 4672086 0.99 4718584 102 47182 4686151 1.00 4733333 103 48009 4659998 1.02 4708007 104 48770 4657947 1.04 4706717 105 49774 4659201 1.06 4708975 106 50614 4646869 1.08 4697483 107 51236 4639861 1.09 4691097 108 52158 4640404 1.11 4692562 109 53371 4629802 1.14 4683173 110 54391 4619928 1.16 4674319 111 55440 4618894 1.19 4674334 112 55983 4603865 1.20 4659848 113 57214 4593064 1.23 4650278 114 58693 4595439 1.26 4654132 115 58910 4582056 1.27 4640966 116 60649 4572506 1.31 4633155 117 62031 4578746 1.34 4640777 118 62859 4560152 1.36 4623011 119 64481 4545837 1.40 4610318 120 66047 4545978 1.43 4612025 121 66928 4528926 1.46 4595854 122 68913 4530972 1.50 4599885 123 69921 4534331 1.52 4604252 124 71254 4513786 1.55 4585040 125 72659 4499389 1.59 4572048 126 74476 4494124 1.63 4568600 127 75633 4466522 1.67 4542155 128 76796 4458817 1.69 4535613 129 78595 4453514 1.73 4532109 130 80306 4439997 1.78 4520303 131 81765 4431979 1.81 4513744 132 83101 4430996 1.84 4514097 133 84707 4409198 1.88 4493905 134 85767 4393836 1.91 4479603 135 88102 4380580 1.97 4468682 136 88997 4364216 2.00 4453213 137 90739 4346049 2.05 4436788 138 91842 4340146 2.07 4431988 139 93045 4320105 2.11 4413150 140 94471 4310137 2.14 4404608 141 96106 4299622 2.19 4395728 142 97682 4282959 2.23 4380641 143 99434 4269789 2.28 4369223 144 101883 4270543 2.33 4372426 145 104742 4252558 2.40 4357300 146 107244 4253500 2.46 4360744 147 113747 4242236 2.61 4355983 148 113319 4211635 2.62 4324954 149 109927 4160473 2.57 4270400 150 101442 3977118 2.49 4078560 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1493361 229375 86.69 1722736 2 513886 114045 81.84 627931 3 386325 177722 68.49 564047 4 453485 296359 60.48 749844 5 309031 338094 47.75 647125 6 235434 373004 38.69 608438 7 181936 459892 28.35 641828 8 159613 527994 23.21 687607 9 137575 586235 19.01 723810 10 118412 628494 15.85 746906 11 102239 665602 13.32 767841 12 93383 671124 12.21 764507 13 86039 670377 11.37 756416 14 82058 667659 10.95 749717 15 77123 665153 10.39 742276 16 74948 658497 10.22 733445 17 75133 654180 10.30 729313 18 74038 647834 10.26 721872 19 73985 643919 10.31 717904 20 74085 640835 10.36 714920 21 73175 639329 10.27 712504 22 73740 638512 10.35 712252 23 73661 635890 10.38 709551 24 72724 635109 10.27 707833 25 72253 632285 10.26 704538 26 72078 630208 10.26 702286 27 71694 630080 10.22 701774 28 71681 628213 10.24 699894 29 70745 625069 10.17 695814 30 70667 622869 10.19 693536 31 69503 619450 10.09 688953 32 69912 617931 10.16 687843 33 69404 613441 10.16 682845 34 69084 609480 10.18 678564 35 68382 607506 10.12 675888 36 67837 603244 10.11 671081 37 67276 601651 10.06 668927 38 66770 595501 10.08 662271 39 66424 593037 10.07 659461 40 65978 587815 10.09 653793 41 65571 582721 10.11 648292 42 64364 579071 10.00 643435 43 64704 573678 10.14 638382 44 63871 572790 10.03 636661 45 62836 565177 10.01 628013 46 62711 562793 10.03 625504 47 62319 559776 10.02 622095 48 61905 554646 10.04 616551 49 61144 551036 9.99 612180 50 60683 545738 10.01 606421 51 59667 540864 9.94 600531 52 59174 536005 9.94 595179 53 58962 532655 9.97 591617 54 58670 527448 10.01 586118 55 58312 524126 10.01 582438 56 57401 519449 9.95 576850 57 56844 514369 9.95 571213 58 56768 511595 9.99 568363 59 56099 506296 9.98 562395 60 55307 501772 9.93 557079 61 54552 496438 9.90 550990 62 54215 492437 9.92 546652 63 53531 488228 9.88 541759 64 53363 483703 9.94 537066 65 53130 478468 9.99 531598 66 52251 474423 9.92 526674 67 51722 470242 9.91 521964 68 51425 465368 9.95 516793 69 50698 462006 9.89 512704 70 50200 455580 9.93 505780 71 49696 451876 9.91 501572 72 49519 447628 9.96 497147 73 48846 443044 9.93 491890 74 48140 439335 9.88 487475 75 48136 434733 9.97 482869 76 47388 430509 9.92 477897 77 46468 426567 9.82 473035 78 46424 420491 9.94 466915 79 46341 416987 10.00 463328 80 45820 413026 9.99 458846 81 45239 409264 9.95 454503 82 44611 404922 9.92 449533 83 44245 400211 9.95 444456 84 43832 395292 9.98 439124 85 43055 391915 9.90 434970 86 42854 387215 9.96 430069 87 42582 383546 9.99 426128 88 41937 379395 9.95 421332 89 41508 375316 9.96 416824 90 41243 371133 10.00 412376 91 40612 367997 9.94 408609 92 40066 364069 9.91 404135 93 40058 359223 10.03 399281 94 39565 355098 10.03 394663 95 39337 351646 10.06 390983 96 38808 347099 10.06 385907 97 38364 344189 10.03 382553 98 38021 339133 10.08 377154 99 37373 335657 10.02 373030 100 36578 332070 9.92 368648 101 36615 328976 10.02 365591 102 35653 325617 9.87 361270 103 35445 321477 9.93 356922 104 35343 318047 10.00 353390 105 34661 314460 9.93 349121 106 34361 310678 9.96 345039 107 34030 307287 9.97 341317 108 33302 302140 9.93 335442 109 33199 299950 9.97 333149 110 32553 296075 9.91 328628 111 32706 292224 10.07 324930 112 32045 289774 9.96 321819 113 31584 286092 9.94 317676 114 31351 281218 10.03 312569 115 30933 278733 9.99 309666 116 30727 275089 10.05 305816 117 30197 271757 10.00 301954 118 29843 269299 9.98 299142 119 29303 264903 9.96 294206 120 28985 262154 9.96 291139 121 28638 258295 9.98 286933 122 28394 255274 10.01 283668 123 28174 251565 10.07 279739 124 27850 249442 10.04 277292 125 27564 246489 10.06 274053 126 27066 244174 9.98 271240 127 26827 241174 10.01 268001 128 26671 238283 10.07 264954 129 26157 235372 10.00 261529 130 26294 232786 10.15 259080 131 25386 228985 9.98 254371 132 25274 226303 10.05 251577 133 24927 223485 10.03 248412 134 24563 220325 10.03 244888 135 24034 217494 9.95 241528 136 23785 214505 9.98 238290 137 23656 212531 10.02 236187 138 23545 209332 10.11 232877 139 22864 206086 9.99 228950 140 22729 204679 9.99 227408 141 22213 201515 9.93 223728 142 22114 198948 10.00 221062 143 21783 196392 9.98 218175 144 21624 193685 10.04 215309 145 21364 190828 10.07 212192 146 21011 187592 10.07 208603 147 20816 185189 10.10 206005 148 20233 181629 10.02 201862 149 19638 167049 10.52 186687 150 18055 0 100.00 18055 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1749948 269616 86.65 2019564 2 1546708 379036 80.32 1925744 3 465933 208450 69.09 674383 4 457564 314095 59.30 771659 5 383365 471232 44.86 854597 6 252732 463343 35.29 716075 7 187448 516158 26.64 703606 8 127477 626422 16.91 753899 9 91352 732201 11.09 823553 10 61692 824734 6.96 886426 11 41377 898464 4.40 939841 12 27103 930805 2.83 957908 13 17888 936570 1.87 954458 14 12508 938556 1.32 951064 15 8704 942505 0.92 951209 16 6790 942851 0.72 949641 17 6321 941356 0.67 947677 18 5348 935697 0.57 941045 19 5377 923890 0.58 929267 20 5203 918866 0.56 924069 21 4967 914367 0.54 919334 22 5424 913887 0.59 919311 23 4967 912607 0.54 917574 24 4606 907791 0.50 912397 25 4662 905537 0.51 910199 26 4519 903398 0.50 907917 27 4436 900722 0.49 905158 28 4726 897910 0.52 902636 29 4216 895222 0.47 899438 30 4167 892221 0.46 896388 31 4106 886052 0.46 890158 32 4051 882552 0.46 886603 33 4107 880412 0.46 884519 34 3916 877304 0.44 881220 35 3948 871981 0.45 875929 36 3856 866678 0.44 870534 37 3951 860620 0.46 864571 38 3846 858930 0.45 862776 39 3873 850578 0.45 854451 40 3703 847568 0.43 851271 41 3705 841635 0.44 845340 42 3868 836314 0.46 840182 43 3819 830135 0.46 833954 44 3597 824822 0.43 828419 45 3429 819041 0.42 822470 46 3608 811906 0.44 815514 47 3639 808000 0.45 811639 48 3549 800657 0.44 804206 49 3562 794846 0.45 798408 50 3402 787067 0.43 790469 51 3363 782870 0.43 786233 52 3464 775588 0.44 779052 53 3263 768481 0.42 771744 54 3522 763935 0.46 767457 55 3200 757835 0.42 761035 56 3404 750942 0.45 754346 57 3297 744431 0.44 747728 58 3257 737988 0.44 741245 59 3260 733186 0.44 736446 60 3143 724170 0.43 727313 61 3225 721094 0.45 724319 62 3194 713277 0.45 716471 63 3086 707181 0.43 710267 64 3125 702310 0.44 705435 65 3054 693632 0.44 696686 66 3017 687647 0.44 690664 67 3108 682409 0.45 685517 68 3017 676359 0.44 679376 69 2933 669967 0.44 672900 70 2847 662680 0.43 665527 71 2960 656389 0.45 659349 72 2903 650440 0.44 653343 73 2826 644674 0.44 647500 74 2822 638652 0.44 641474 75 2788 631131 0.44 633919 76 2705 626679 0.43 629384 77 2731 620931 0.44 623662 78 2590 615077 0.42 617667 79 2729 609394 0.45 612123 80 2543 602777 0.42 605320 81 2577 594970 0.43 597547 82 2550 590493 0.43 593043 83 2576 586052 0.44 588628 84 2545 578691 0.44 581236 85 2498 572980 0.43 575478 86 2481 566184 0.44 568665 87 2446 560959 0.43 563405 88 2362 556431 0.42 558793 89 2471 549066 0.45 551537 90 2438 543367 0.45 545805 91 2363 537137 0.44 539500 92 2319 532337 0.43 534656 93 2338 525191 0.44 527529 94 2309 521778 0.44 524087 95 2365 515374 0.46 517739 96 2265 509570 0.44 511835 97 2289 502149 0.45 504438 98 2120 499969 0.42 502089 99 2096 492266 0.42 494362 100 2215 486834 0.45 489049 101 2154 482951 0.44 485105 102 2120 477857 0.44 479977 103 2022 471756 0.43 473778 104 2041 467446 0.43 469487 105 1965 460548 0.42 462513 106 1985 456181 0.43 458166 107 1971 450563 0.44 452534 108 1996 445916 0.45 447912 109 1996 440037 0.45 442033 110 1967 435636 0.45 437603 111 1907 430150 0.44 432057 112 1902 424913 0.45 426815 113 1918 421073 0.45 422991 114 1840 415176 0.44 417016 115 1867 410574 0.45 412441 116 1784 404536 0.44 406320 117 1723 401037 0.43 402760 118 1772 396292 0.45 398064 119 1835 390932 0.47 392767 120 1774 385911 0.46 387685 121 1750 382494 0.46 384244 122 1690 376505 0.45 378195 123 1699 373695 0.45 375394 124 1689 368832 0.46 370521 125 1593 362974 0.44 364567 126 1700 359271 0.47 360971 127 1548 354911 0.43 356459 128 1571 350444 0.45 352015 129 1639 345841 0.47 347480 130 1591 342954 0.46 344545 131 1590 338471 0.47 340061 132 1547 334174 0.46 335721 133 1462 328757 0.44 330219 134 1550 325322 0.47 326872 135 1440 320965 0.45 322405 136 1440 317697 0.45 319137 137 1448 313097 0.46 314545 138 1431 309316 0.46 310747 139 1383 305108 0.45 306491 140 1463 300962 0.48 302425 141 1416 298359 0.47 299775 142 1382 293143 0.47 294525 143 1389 290219 0.48 291608 144 1362 286666 0.47 288028 145 1319 281790 0.47 283109 146 1253 278574 0.45 279827 147 1331 273169 0.48 274500 148 1235 268500 0.46 269735 149 1093 248515 0.44 249608 150 764 0 100.00 764 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 5124705 783544 86.74 5908249 2 4255880 1024598 80.60 5280478 3 3690768 1868854 66.39 5559622 4 3172529 2302661 57.94 5475190 5 2135949 2677473 44.37 4813422 6 1586542 2877263 35.54 4463805 7 1130533 2998757 27.38 4129290 8 803349 3070682 20.74 3874031 9 549629 3209063 14.62 3758692 10 367623 3359852 9.86 3727475 11 233522 3600463 6.09 3833985 12 148520 3705761 3.85 3854281 13 94830 3758983 2.46 3853813 14 60164 3785709 1.56 3845873 15 40629 3810588 1.05 3851217 16 30030 3827880 0.78 3857910 17 24967 3842602 0.65 3867569 18 22307 3837368 0.58 3859675 19 21067 3821308 0.55 3842375 20 20739 3802401 0.54 3823140 21 20433 3779180 0.54 3799613 22 20997 3758427 0.56 3779424 23 21022 3735956 0.56 3756978 24 20265 3713585 0.54 3733850 25 19645 3692448 0.53 3712093 26 18855 3674276 0.51 3693131 27 18443 3649564 0.50 3668007 28 18044 3630170 0.49 3648214 29 18053 3611783 0.50 3629836 30 17427 3591755 0.48 3609182 31 17107 3569229 0.48 3586336 32 16529 3550872 0.46 3567401 33 16052 3527979 0.45 3544031 34 15654 3505595 0.44 3521249 35 15305 3485564 0.44 3500869 36 15018 3461062 0.43 3476080 37 14801 3441246 0.43 3456047 38 14737 3419933 0.43 3434670 39 14644 3398887 0.43 3413531 40 14443 3378018 0.43 3392461 41 14305 3355051 0.42 3369356 42 14328 3332029 0.43 3346357 43 14035 3308680 0.42 3322715 44 13964 3282767 0.42 3296731 45 13855 3259117 0.42 3272972 46 13688 3234231 0.42 3247919 47 13729 3205754 0.43 3219483 48 13611 3182508 0.43 3196119 49 13575 3163054 0.43 3176629 50 13277 3138343 0.42 3151620 51 13484 3116372 0.43 3129856 52 12979 3090246 0.42 3103225 53 12993 3063680 0.42 3076673 54 13109 3039175 0.43 3052284 55 12704 3014564 0.42 3027268 56 12551 2993326 0.42 3005877 57 12456 2965379 0.42 2977835 58 12454 2941224 0.42 2953678 59 12383 2913957 0.42 2926340 60 12487 2891382 0.43 2903869 61 12164 2862963 0.42 2875127 62 12214 2841879 0.43 2854093 63 12029 2818312 0.43 2830341 64 11853 2792255 0.42 2804108 65 11812 2769305 0.42 2781117 66 11698 2745247 0.42 2756945 67 11671 2719946 0.43 2731617 68 11435 2696425 0.42 2707860 69 11324 2673250 0.42 2684574 70 11285 2649477 0.42 2660762 71 11122 2624103 0.42 2635225 72 10979 2601173 0.42 2612152 73 10807 2574397 0.42 2585204 74 10811 2552413 0.42 2563224 75 10694 2526281 0.42 2536975 76 10598 2502923 0.42 2513521 77 10573 2480793 0.42 2491366 78 10499 2453432 0.43 2463931 79 10328 2430411 0.42 2440739 80 10213 2409096 0.42 2419309 81 10032 2385841 0.42 2395873 82 10152 2364235 0.43 2374387 83 9866 2339060 0.42 2348926 84 9747 2314358 0.42 2324105 85 9778 2293589 0.42 2303367 86 9785 2272785 0.43 2282570 87 9738 2247379 0.43 2257117 88 9404 2224902 0.42 2234306 89 9405 2200847 0.43 2210252 90 9264 2178939 0.42 2188203 91 9095 2155835 0.42 2164930 92 9146 2136535 0.43 2145681 93 8846 2111711 0.42 2120557 94 8911 2091567 0.42 2100478 95 8899 2066809 0.43 2075708 96 8681 2046609 0.42 2055290 97 8508 2023427 0.42 2031935 98 8644 2004399 0.43 2013043 99 8441 1980097 0.42 1988538 100 8428 1959126 0.43 1967554 101 8324 1938477 0.43 1946801 102 8219 1916680 0.43 1924899 103 8061 1895989 0.42 1904050 104 8082 1872733 0.43 1880815 105 7946 1853556 0.43 1861502 106 7792 1830665 0.42 1838457 107 7812 1810127 0.43 1817939 108 7579 1790784 0.42 1798363 109 7601 1771767 0.43 1779368 110 7504 1752028 0.43 1759532 111 7440 1730019 0.43 1737459 112 7376 1711024 0.43 1718400 113 7250 1692230 0.43 1699480 114 7280 1673761 0.43 1681041 115 7384 1654756 0.44 1662140 116 6823 1635165 0.42 1641988 117 6903 1616611 0.43 1623514 118 6813 1595820 0.43 1602633 119 6800 1577416 0.43 1584216 120 6817 1555686 0.44 1562503 121 6747 1542448 0.44 1549195 122 6642 1522831 0.43 1529473 123 6493 1504600 0.43 1511093 124 6417 1486442 0.43 1492859 125 6423 1467607 0.44 1474030 126 6311 1450412 0.43 1456723 127 6169 1431196 0.43 1437365 128 6173 1414595 0.43 1420768 129 6111 1398517 0.44 1404628 130 6003 1379473 0.43 1385476 131 5906 1364316 0.43 1370222 132 5997 1345441 0.44 1351438 133 5856 1330838 0.44 1336694 134 5739 1313331 0.44 1319070 135 5687 1296544 0.44 1302231 136 5634 1281632 0.44 1287266 137 5652 1265086 0.44 1270738 138 5655 1249410 0.45 1255065 139 5566 1233309 0.45 1238875 140 5338 1216438 0.44 1221776 141 5368 1199370 0.45 1204738 142 5293 1184285 0.44 1189578 143 5323 1170585 0.45 1175908 144 5288 1153454 0.46 1158742 145 5157 1139748 0.45 1144905 146 5162 1123389 0.46 1128551 147 5097 1106542 0.46 1111639 148 4776 1086159 0.44 1090935 149 4106 1006038 0.41 1010144 150 2985 0 100.00 2985