SRR18245602.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 38792262 lines in total Total number of methylation call strings processed: 77584524 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1403786785 Total methylated C's in CpG context: 21260919 Total methylated C's in CHG context: 6739198 Total methylated C's in CHH context: 27684108 Total C to T conversions in CpG context: 183960746 Total C to T conversions in CHG context: 249433134 Total C to T conversions in CHH context: 914708680 C methylated in CpG context: 10.4% C methylated in non-CpG context: 2.9%