SRR18245601.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 41701926 lines in total Total number of methylation call strings processed: 83403852 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1480376152 Total methylated C's in CpG context: 22584489 Total methylated C's in CHG context: 7098478 Total methylated C's in CHH context: 30529750 Total C to T conversions in CpG context: 176036068 Total C to T conversions in CHG context: 252981600 Total C to T conversions in CHH context: 991145767 C methylated in CpG context: 11.4% C methylated in non-CpG context: 2.9%