CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 49052 847133 5.47 896185 2 123638 1004511 10.96 1128149 3 95043 641611 12.90 736654 4 86310 901677 8.74 987987 5 98672 871317 10.17 969989 6 117712 1067866 9.93 1185578 7 106116 865008 10.93 971124 8 99092 848073 10.46 947165 9 92920 820863 10.17 913783 10 89302 787818 10.18 877120 11 86020 811886 9.58 897906 12 84293 765981 9.91 850274 13 84618 772820 9.87 857438 14 86525 799189 9.77 885714 15 86874 810361 9.68 897235 16 87187 825145 9.56 912332 17 89040 837243 9.61 926283 18 91427 851601 9.70 943028 19 91295 845723 9.74 937018 20 91416 851323 9.70 942739 21 92305 846337 9.83 938642 22 91021 842003 9.76 933024 23 91286 837284 9.83 928570 24 92038 845343 9.82 937381 25 89906 835308 9.72 925214 26 90407 829143 9.83 919550 27 91555 835583 9.88 927138 28 90486 835014 9.78 925500 29 90844 834731 9.81 925575 30 92086 838485 9.90 930571 31 90671 832363 9.82 923034 32 91031 832015 9.86 923046 33 91123 835633 9.83 926756 34 89879 829166 9.78 919045 35 90881 829678 9.87 920559 36 90832 835916 9.80 926748 37 89426 826663 9.76 916089 38 90031 829870 9.79 919901 39 90395 837287 9.74 927682 40 89770 830796 9.75 920566 41 90284 831217 9.80 921501 42 90753 836028 9.79 926781 43 89442 826989 9.76 916431 44 91105 825571 9.94 916676 45 89477 826900 9.76 916377 46 89256 824558 9.77 913814 47 89362 824833 9.77 914195 48 89446 831975 9.71 921421 49 89292 824901 9.77 914193 50 89516 826185 9.78 915701 51 89584 824740 9.80 914324 52 89113 822985 9.77 912098 53 89636 821887 9.83 911523 54 89094 824230 9.75 913324 55 88645 819197 9.76 907842 56 89110 814746 9.86 903856 57 88169 820337 9.70 908506 58 87401 816233 9.67 903634 59 88250 815198 9.77 903448 60 88414 818031 9.75 906445 61 88089 814890 9.76 902979 62 88180 815542 9.76 903722 63 88444 820078 9.73 908522 64 87896 815326 9.73 903222 65 87921 810351 9.79 898272 66 88732 814425 9.82 903157 67 87440 805972 9.79 893412 68 87637 809872 9.76 897509 69 87969 812082 9.77 900051 70 87877 807086 9.82 894963 71 87626 807870 9.79 895496 72 87446 812620 9.72 900066 73 87447 806738 9.78 894185 74 87706 806408 9.81 894114 75 87503 808144 9.77 895647 76 87033 804174 9.77 891207 77 87009 805921 9.74 892930 78 86905 805145 9.74 892050 79 86909 801086 9.79 887995 80 87059 799597 9.82 886656 81 87359 801933 9.82 889292 82 86333 798033 9.76 884366 83 86833 799809 9.79 886642 84 87081 801428 9.80 888509 85 86663 798376 9.79 885039 86 86106 798996 9.73 885102 87 86553 795606 9.81 882159 88 86000 791722 9.80 877722 89 86403 788692 9.87 875095 90 86137 793493 9.79 879630 91 85427 789324 9.77 874751 92 85560 786700 9.81 872260 93 86308 791527 9.83 877835 94 85798 790608 9.79 876406 95 86507 789121 9.88 875628 96 86423 789116 9.87 875539 97 86689 788063 9.91 874752 98 85836 785693 9.85 871529 99 86200 786601 9.88 872801 100 85361 780606 9.86 865967 101 85257 778454 9.87 863711 102 85579 780365 9.88 865944 103 85069 775978 9.88 861047 104 84989 775688 9.87 860677 105 85392 778536 9.88 863928 106 85445 772737 9.96 858182 107 85543 771266 9.98 856809 108 85111 770943 9.94 856054 109 84823 766961 9.96 851784 110 84921 765743 9.98 850664 111 85384 767324 10.01 852708 112 85102 764518 10.02 849620 113 85066 765117 10.01 850183 114 85252 764217 10.04 849469 115 84824 760937 10.03 845761 116 85084 757835 10.09 842919 117 85150 759526 10.08 844676 118 85817 755008 10.21 840825 119 85211 754877 10.14 840088 120 85067 754991 10.13 840058 121 84735 749419 10.16 834154 122 84493 748279 10.15 832772 123 84323 747323 10.14 831646 124 85026 745175 10.24 830201 125 84470 741802 10.22 826272 126 84574 742061 10.23 826635 127 84560 736259 10.30 820819 128 84357 736173 10.28 820530 129 83914 737426 10.22 821340 130 83768 730489 10.29 814257 131 84379 728621 10.38 813000 132 84065 730914 10.31 814979 133 83249 724722 10.30 807971 134 84549 726059 10.43 810608 135 84249 725630 10.40 809879 136 83847 722647 10.40 806494 137 83926 718571 10.46 802497 138 83878 716899 10.47 800777 139 83385 712033 10.48 795418 140 83400 709434 10.52 792834 141 83355 709479 10.51 792834 142 83028 704214 10.55 787242 143 83315 702405 10.60 785720 144 83178 702069 10.59 785247 145 82802 696404 10.63 779206 146 83449 695559 10.71 779008 147 84182 696493 10.78 780675 148 82789 694011 10.66 776800 149 81913 687123 10.65 769036 150 83415 652355 11.34 735770 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 16444 1728019 0.94 1744463 2 12691 1191038 1.05 1203729 3 6402 1016791 0.63 1023193 4 5444 1256111 0.43 1261555 5 7126 1483094 0.48 1490220 6 7347 1351417 0.54 1358764 7 5789 1165868 0.49 1171657 8 5018 1158459 0.43 1163477 9 4826 1123313 0.43 1128139 10 4984 1126698 0.44 1131682 11 5121 1154882 0.44 1160003 12 4472 1162597 0.38 1167069 13 4246 1159169 0.36 1163415 14 4294 1165402 0.37 1169696 15 4416 1185558 0.37 1189974 16 4477 1201864 0.37 1206341 17 4562 1218309 0.37 1222871 18 4520 1218420 0.37 1222940 19 4679 1215195 0.38 1219874 20 5089 1219672 0.42 1224761 21 5423 1225343 0.44 1230766 22 5788 1217518 0.47 1223306 23 6115 1209871 0.50 1215986 24 6245 1204711 0.52 1210956 25 6535 1200766 0.54 1207301 26 6928 1201909 0.57 1208837 27 7171 1210271 0.59 1217442 28 7377 1203428 0.61 1210805 29 8329 1202375 0.69 1210704 30 8535 1212632 0.70 1221167 31 8411 1205878 0.69 1214289 32 8235 1209052 0.68 1217287 33 8427 1209115 0.69 1217542 34 8324 1202373 0.69 1210697 35 8199 1200311 0.68 1208510 36 7933 1206479 0.65 1214412 37 7948 1202784 0.66 1210732 38 7854 1211562 0.64 1219416 39 8217 1209736 0.67 1217953 40 8079 1204729 0.67 1212808 41 8179 1203206 0.68 1211385 42 8181 1207728 0.67 1215909 43 8265 1201599 0.68 1209864 44 8315 1196069 0.69 1204384 45 8310 1198870 0.69 1207180 46 8397 1192403 0.70 1200800 47 8331 1190118 0.70 1198449 48 8406 1196482 0.70 1204888 49 8432 1196693 0.70 1205125 50 8576 1189648 0.72 1198224 51 8646 1194602 0.72 1203248 52 8595 1190108 0.72 1198703 53 8594 1191741 0.72 1200335 54 8900 1194311 0.74 1203211 55 8759 1187669 0.73 1196428 56 8864 1183721 0.74 1192585 57 8922 1183319 0.75 1192241 58 8978 1184665 0.75 1193643 59 9110 1183017 0.76 1192127 60 9040 1190589 0.75 1199629 61 9142 1188067 0.76 1197209 62 9141 1187473 0.76 1196614 63 9387 1191324 0.78 1200711 64 9209 1178451 0.78 1187660 65 9229 1173993 0.78 1183222 66 9265 1176050 0.78 1185315 67 9113 1171743 0.77 1180856 68 9251 1172226 0.78 1181477 69 9429 1177050 0.79 1186479 70 9492 1172427 0.80 1181919 71 9425 1167311 0.80 1176736 72 9473 1171114 0.80 1180587 73 9438 1166664 0.80 1176102 74 9636 1167012 0.82 1176648 75 9844 1173806 0.83 1183650 76 9707 1166597 0.83 1176304 77 9712 1160166 0.83 1169878 78 9762 1167173 0.83 1176935 79 9811 1159621 0.84 1169432 80 9982 1157730 0.85 1167712 81 9925 1161886 0.85 1171811 82 10247 1157071 0.88 1167318 83 10101 1155319 0.87 1165420 84 10474 1161506 0.89 1171980 85 10302 1157092 0.88 1167394 86 10493 1151016 0.90 1161509 87 10477 1150987 0.90 1161464 88 10284 1148158 0.89 1158442 89 10719 1145071 0.93 1155790 90 10586 1150187 0.91 1160773 91 10736 1141700 0.93 1152436 92 10727 1139707 0.93 1150434 93 10884 1145698 0.94 1156582 94 11065 1143706 0.96 1154771 95 11077 1140304 0.96 1151381 96 11184 1140981 0.97 1152165 97 11380 1133285 0.99 1144665 98 11559 1130859 1.01 1142418 99 11739 1132435 1.03 1144174 100 11807 1128379 1.04 1140186 101 11878 1122470 1.05 1134348 102 12105 1125526 1.06 1137631 103 12076 1119903 1.07 1131979 104 12332 1118001 1.09 1130333 105 12474 1122680 1.10 1135154 106 12891 1117502 1.14 1130393 107 12676 1113296 1.13 1125972 108 13152 1115556 1.17 1128708 109 13428 1111931 1.19 1125359 110 13460 1107902 1.20 1121362 111 13617 1109801 1.21 1123418 112 13841 1109058 1.23 1122899 113 13895 1101517 1.25 1115412 114 14375 1099982 1.29 1114357 115 14329 1095439 1.29 1109768 116 14619 1095477 1.32 1110096 117 14912 1096668 1.34 1111580 118 15203 1090688 1.37 1105891 119 15053 1088644 1.36 1103697 120 15534 1088669 1.41 1104203 121 15675 1082072 1.43 1097747 122 15746 1076608 1.44 1092354 123 16338 1079534 1.49 1095872 124 16367 1077145 1.50 1093512 125 16808 1071354 1.54 1088162 126 16923 1072544 1.55 1089467 127 17450 1066746 1.61 1084196 128 17359 1063326 1.61 1080685 129 18000 1059980 1.67 1077980 130 18049 1055123 1.68 1073172 131 18348 1051501 1.72 1069849 132 18736 1053902 1.75 1072638 133 18684 1046405 1.75 1065089 134 19019 1044871 1.79 1063890 135 19396 1040539 1.83 1059935 136 19958 1032953 1.90 1052911 137 19589 1031224 1.86 1050813 138 20127 1028520 1.92 1048647 139 20084 1023206 1.93 1043290 140 20485 1019443 1.97 1039928 141 20560 1019602 1.98 1040162 142 21042 1014515 2.03 1035557 143 21409 1009039 2.08 1030448 144 21806 1009276 2.11 1031082 145 22209 1005914 2.16 1028123 146 23674 1001363 2.31 1025037 147 23942 1000247 2.34 1024189 148 24501 992172 2.41 1016673 149 32010 992262 3.13 1024272 150 29264 930366 3.05 959630 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 29496 4817534 0.61 4847030 2 56193 4201385 1.32 4257578 3 23719 3620181 0.65 3643900 4 21241 4550788 0.46 4572029 5 22908 4688943 0.49 4711851 6 21576 4644601 0.46 4666177 7 21102 4137805 0.51 4158907 8 18741 4319837 0.43 4338578 9 18916 4423579 0.43 4442495 10 17575 4473589 0.39 4491164 11 17712 4693013 0.38 4710725 12 17221 4688085 0.37 4705306 13 16626 4685636 0.35 4702262 14 17608 4710561 0.37 4728169 15 19104 4701230 0.40 4720334 16 20927 4662154 0.45 4683081 17 23981 4656985 0.51 4680966 18 27186 4699240 0.58 4726426 19 31168 4693442 0.66 4724610 20 35228 4704854 0.74 4740082 21 38891 4718420 0.82 4757311 22 42188 4668472 0.90 4710660 23 45480 4654186 0.97 4699666 24 48282 4680371 1.02 4728653 25 50660 4682260 1.07 4732920 26 52228 4686750 1.10 4738978 27 54318 4708380 1.14 4762698 28 54294 4694618 1.14 4748912 29 54676 4710210 1.15 4764886 30 54714 4742213 1.14 4796927 31 51025 4715904 1.07 4766929 32 48377 4699434 1.02 4747811 33 46178 4722464 0.97 4768642 34 43579 4687635 0.92 4731214 35 41010 4688341 0.87 4729351 36 39458 4709299 0.83 4748757 37 38201 4696919 0.81 4735120 38 37584 4691345 0.79 4728929 39 37787 4712769 0.80 4750556 40 37435 4689470 0.79 4726905 41 36952 4687639 0.78 4724591 42 36914 4705768 0.78 4742682 43 36351 4672483 0.77 4708834 44 36622 4660277 0.78 4696899 45 36363 4673049 0.77 4709412 46 36802 4659366 0.78 4696168 47 36705 4654204 0.78 4690909 48 36480 4671362 0.77 4707842 49 36896 4642315 0.79 4679211 50 37034 4642371 0.79 4679405 51 37117 4658526 0.79 4695643 52 37472 4641640 0.80 4679112 53 37627 4634077 0.81 4671704 54 37626 4643760 0.80 4681386 55 37282 4635196 0.80 4672478 56 37581 4637583 0.80 4675164 57 38026 4651674 0.81 4689700 58 37782 4636042 0.81 4673824 59 38033 4625186 0.82 4663219 60 38593 4637688 0.83 4676281 61 38035 4610468 0.82 4648503 62 38322 4611283 0.82 4649605 63 38794 4613573 0.83 4652367 64 38204 4588845 0.83 4627049 65 38519 4583986 0.83 4622505 66 38769 4594122 0.84 4632891 67 39187 4575939 0.85 4615126 68 39198 4582129 0.85 4621327 69 39632 4597181 0.85 4636813 70 39765 4586477 0.86 4626242 71 39532 4578937 0.86 4618469 72 40405 4586673 0.87 4627078 73 40529 4571666 0.88 4612195 74 40630 4571116 0.88 4611746 75 40957 4572771 0.89 4613728 76 41005 4554701 0.89 4595706 77 41117 4550078 0.90 4591195 78 41496 4562089 0.90 4603585 79 41388 4538653 0.90 4580041 80 41956 4528666 0.92 4570622 81 42115 4537719 0.92 4579834 82 42739 4522726 0.94 4565465 83 42401 4516406 0.93 4558807 84 43102 4527343 0.94 4570445 85 42703 4491275 0.94 4533978 86 43498 4496490 0.96 4539988 87 44096 4510955 0.97 4555051 88 44447 4500467 0.98 4544914 89 44617 4494549 0.98 4539166 90 45035 4499620 0.99 4544655 91 45201 4476071 1.00 4521272 92 45782 4469521 1.01 4515303 93 46570 4477786 1.03 4524356 94 46720 4451448 1.04 4498168 95 46973 4448227 1.04 4495200 96 47682 4454482 1.06 4502164 97 48107 4439563 1.07 4487670 98 48676 4435536 1.09 4484212 99 49766 4443343 1.11 4493109 100 49690 4424811 1.11 4474501 101 50454 4427491 1.13 4477945 102 51086 4428891 1.14 4479977 103 51603 4405909 1.16 4457512 104 52300 4397355 1.18 4449655 105 53692 4406114 1.20 4459806 106 53595 4388421 1.21 4442016 107 54858 4382940 1.24 4437798 108 55850 4383968 1.26 4439818 109 56302 4363106 1.27 4419408 110 57622 4358160 1.30 4415782 111 57618 4359062 1.30 4416680 112 58485 4341081 1.33 4399566 113 59568 4326524 1.36 4386092 114 60512 4321257 1.38 4381769 115 61341 4308338 1.40 4369679 116 62371 4295708 1.43 4358079 117 63792 4307648 1.46 4371440 118 64419 4283418 1.48 4347837 119 65137 4272123 1.50 4337260 120 66575 4272366 1.53 4338941 121 67311 4253013 1.56 4320324 122 68931 4249093 1.60 4318024 123 70090 4255746 1.62 4325836 124 71156 4238138 1.65 4309294 125 71628 4220671 1.67 4292299 126 73247 4220111 1.71 4293358 127 73869 4190823 1.73 4264692 128 75606 4178437 1.78 4254043 129 76182 4173613 1.79 4249795 130 77431 4158251 1.83 4235682 131 78766 4155483 1.86 4234249 132 79784 4150636 1.89 4230420 133 80880 4126834 1.92 4207714 134 82386 4111369 1.96 4193755 135 83074 4101515 1.99 4184589 136 84739 4083953 2.03 4168692 137 85199 4064242 2.05 4149441 138 86959 4062507 2.10 4149466 139 87855 4039267 2.13 4127122 140 89008 4029737 2.16 4118745 141 90422 4019019 2.20 4109441 142 90788 4003845 2.22 4094633 143 92624 3988907 2.27 4081531 144 95115 3995360 2.33 4090475 145 97319 3974730 2.39 4072049 146 100004 3968071 2.46 4068075 147 105776 3964800 2.60 4070576 148 105524 3930068 2.61 4035592 149 102416 3883490 2.57 3985906 150 98648 3686966 2.61 3785614 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1404057 220756 86.41 1624813 2 474493 107291 81.56 581784 3 356735 167105 68.10 523840 4 412465 279033 59.65 691498 5 280236 313766 47.18 594002 6 214499 345901 38.28 560400 7 166938 425922 28.16 592860 8 147666 490877 23.13 638543 9 128744 544574 19.12 673318 10 111356 577899 16.16 689255 11 95667 609312 13.57 704979 12 86847 616238 12.35 703085 13 80376 618776 11.50 699152 14 75545 618153 10.89 693698 15 70746 619091 10.26 689837 16 68483 615555 10.01 684038 17 69123 612924 10.13 682047 18 67847 610139 10.01 677986 19 67884 606613 10.06 674497 20 67403 604964 10.02 672367 21 67477 604695 10.04 672172 22 66972 604898 9.97 671870 23 67058 602263 10.02 669321 24 66706 601838 9.98 668544 25 66436 598507 9.99 664943 26 66406 599570 9.97 665976 27 65536 597651 9.88 663187 28 65149 596058 9.85 661207 29 64902 593862 9.85 658764 30 64594 592801 9.83 657395 31 64306 591349 9.81 655655 32 63655 588463 9.76 652118 33 63231 586119 9.74 649350 34 63097 581365 9.79 644462 35 62726 579432 9.77 642158 36 61828 575525 9.70 637353 37 61420 574209 9.66 635629 38 60942 570307 9.65 631249 39 60716 565866 9.69 626582 40 60186 562795 9.66 622981 41 59460 558815 9.62 618275 42 59500 554738 9.69 614238 43 58609 550731 9.62 609340 44 58202 547217 9.61 605419 45 57872 541982 9.65 599854 46 57068 538685 9.58 595753 47 56982 535949 9.61 592931 48 55845 530564 9.52 586409 49 55494 526037 9.54 581531 50 55808 523412 9.64 579220 51 54879 518134 9.58 573013 52 54234 514246 9.54 568480 53 53790 511177 9.52 564967 54 53569 506163 9.57 559732 55 52591 501749 9.49 554340 56 52663 498854 9.55 551517 57 51714 493289 9.49 545003 58 51432 489510 9.51 540942 59 50733 483741 9.49 534474 60 50029 478801 9.46 528830 61 49731 476705 9.45 526436 62 49316 469539 9.50 518855 63 48934 465167 9.52 514101 64 48387 461323 9.49 509710 65 47659 456821 9.45 504480 66 47432 452289 9.49 499721 67 47006 447924 9.50 494930 68 46215 442597 9.45 488812 69 45786 438492 9.45 484278 70 44931 434018 9.38 478949 71 44813 430065 9.44 474878 72 44332 425210 9.44 469542 73 43603 419339 9.42 462942 74 42965 415240 9.38 458205 75 43019 410233 9.49 453252 76 41896 406043 9.35 447939 77 41639 400790 9.41 442429 78 40651 396144 9.31 436795 79 40671 392001 9.40 432672 80 40468 388316 9.44 428784 81 40000 381889 9.48 421889 82 39101 379627 9.34 418728 83 38929 372922 9.45 411851 84 38465 368290 9.46 406755 85 37608 363886 9.37 401494 86 37486 359242 9.45 396728 87 36483 353992 9.34 390475 88 36147 350038 9.36 386185 89 35670 344583 9.38 380253 90 35239 341887 9.34 377126 91 34647 335724 9.35 370371 92 34600 332159 9.43 366759 93 33910 327871 9.37 361781 94 33531 322783 9.41 356314 95 33084 318158 9.42 351242 96 32102 314237 9.27 346339 97 31582 309620 9.26 341202 98 31235 305812 9.27 337047 99 30822 301050 9.29 331872 100 30681 296943 9.36 327624 101 29825 293055 9.24 322880 102 29733 288273 9.35 318006 103 28953 283586 9.26 312539 104 28567 279441 9.27 308008 105 28169 275361 9.28 303530 106 28186 270619 9.43 298805 107 27632 266576 9.39 294208 108 26909 262600 9.29 289509 109 26405 259755 9.23 286160 110 26283 254480 9.36 280763 111 25417 251029 9.19 276446 112 25125 247641 9.21 272766 113 24791 242470 9.28 267261 114 24510 237367 9.36 261877 115 23888 235620 9.21 259508 116 23622 231910 9.24 255532 117 23199 226691 9.28 249890 118 22766 223495 9.24 246261 119 22160 219670 9.16 241830 120 21881 216318 9.19 238199 121 21687 212269 9.27 233956 122 21492 209456 9.31 230948 123 20992 206405 9.23 227397 124 20663 202255 9.27 222918 125 20165 198595 9.22 218760 126 19973 195160 9.28 215133 127 19656 191209 9.32 210865 128 18978 188630 9.14 207608 129 18831 185586 9.21 204417 130 18494 181776 9.23 200270 131 18095 178675 9.20 196770 132 17364 175914 8.98 193278 133 17281 172546 9.10 189827 134 17099 169345 9.17 186444 135 16576 165882 9.08 182458 136 16577 162826 9.24 179403 137 15871 160294 9.01 176165 138 15651 156795 9.08 172446 139 15402 154364 9.07 169766 140 15110 151113 9.09 166223 141 14746 148286 9.04 163032 142 14622 145900 9.11 160522 143 14449 142955 9.18 157404 144 14031 140267 9.09 154298 145 13675 137535 9.04 151210 146 13477 134234 9.12 147711 147 12924 132271 8.90 145195 148 12788 127622 9.11 140410 149 12320 114370 9.72 126690 150 10838 0 100.00 10838 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1645258 257918 86.45 1903176 2 1452633 363504 79.98 1816137 3 427901 196191 68.56 624092 4 419173 295400 58.66 714573 5 349742 438209 44.39 787951 6 232023 430334 35.03 662357 7 174894 482109 26.62 657003 8 122131 589754 17.16 711885 9 88925 687697 11.45 776622 10 61825 768554 7.45 830379 11 43542 834094 4.96 877636 12 29054 859654 3.27 888708 13 19298 868089 2.17 887387 14 13658 875307 1.54 888965 15 9596 878868 1.08 888464 16 7370 882316 0.83 889686 17 6812 883088 0.77 889900 18 5523 877963 0.63 883486 19 5579 871288 0.64 876867 20 5160 866090 0.59 871250 21 4652 861316 0.54 865968 22 5114 861589 0.59 866703 23 4223 859960 0.49 864183 24 4006 859612 0.46 863618 25 3959 857961 0.46 861920 26 3770 855688 0.44 859458 27 3652 855420 0.43 859072 28 3691 852752 0.43 856443 29 3448 850230 0.40 853678 30 3345 845393 0.39 848738 31 3324 842126 0.39 845450 32 3244 842420 0.38 845664 33 3160 837319 0.38 840479 34 3123 833857 0.37 836980 35 3186 829034 0.38 832220 36 3032 824754 0.37 827786 37 2949 819977 0.36 822926 38 2920 816964 0.36 819884 39 2976 811110 0.37 814086 40 2943 806377 0.36 809320 41 2940 801412 0.37 804352 42 2843 796689 0.36 799532 43 2922 789288 0.37 792210 44 2750 784787 0.35 787537 45 2813 778577 0.36 781390 46 2953 773851 0.38 776804 47 2719 766240 0.35 768959 48 2648 760446 0.35 763094 49 2637 753310 0.35 755947 50 2714 746146 0.36 748860 51 2671 741724 0.36 744395 52 2639 735196 0.36 737835 53 2516 728416 0.34 730932 54 2559 723299 0.35 725858 55 2546 715445 0.35 717991 56 2518 710152 0.35 712670 57 2534 703860 0.36 706394 58 2565 697161 0.37 699726 59 2577 691399 0.37 693976 60 2526 682620 0.37 685146 61 2393 677314 0.35 679707 62 2304 672886 0.34 675190 63 2370 663787 0.36 666157 64 2365 657907 0.36 660272 65 2373 650504 0.36 652877 66 2304 645973 0.36 648277 67 2302 638166 0.36 640468 68 2318 633104 0.36 635422 69 2264 625170 0.36 627434 70 2245 617449 0.36 619694 71 2203 611037 0.36 613240 72 2177 604827 0.36 607004 73 2172 597570 0.36 599742 74 2106 591411 0.35 593517 75 2143 584877 0.37 587020 76 2101 578997 0.36 581098 77 2053 572053 0.36 574106 78 2023 564488 0.36 566511 79 1937 556217 0.35 558154 80 2035 551390 0.37 553425 81 2018 546696 0.37 548714 82 1954 538528 0.36 540482 83 1863 532364 0.35 534227 84 1899 525591 0.36 527490 85 1924 519074 0.37 520998 86 1853 510998 0.36 512851 87 1872 504247 0.37 506119 88 1793 499881 0.36 501674 89 1713 491607 0.35 493320 90 1696 484397 0.35 486093 91 1666 478546 0.35 480212 92 1669 471881 0.35 473550 93 1727 465973 0.37 467700 94 1642 457557 0.36 459199 95 1648 454088 0.36 455736 96 1631 446341 0.36 447972 97 1607 439572 0.36 441179 98 1620 434767 0.37 436387 99 1502 427124 0.35 428626 100 1488 421577 0.35 423065 101 1440 414835 0.35 416275 102 1436 408786 0.35 410222 103 1454 403036 0.36 404490 104 1419 397102 0.36 398521 105 1460 390593 0.37 392053 106 1329 385125 0.34 386454 107 1374 379199 0.36 380573 108 1354 373826 0.36 375180 109 1258 366581 0.34 367839 110 1300 361981 0.36 363281 111 1252 356659 0.35 357911 112 1209 349193 0.35 350402 113 1244 345275 0.36 346519 114 1151 340071 0.34 341222 115 1294 333754 0.39 335048 116 1150 328992 0.35 330142 117 1161 322448 0.36 323609 118 1123 318427 0.35 319550 119 1171 311812 0.37 312983 120 1053 306307 0.34 307360 121 1039 302132 0.34 303171 122 1102 296939 0.37 298041 123 1074 291535 0.37 292609 124 1010 287008 0.35 288018 125 1003 281916 0.35 282919 126 950 276984 0.34 277934 127 977 271864 0.36 272841 128 946 267475 0.35 268421 129 929 262297 0.35 263226 130 903 258378 0.35 259281 131 931 252534 0.37 253465 132 976 248422 0.39 249398 133 859 245261 0.35 246120 134 835 239008 0.35 239843 135 825 235291 0.35 236116 136 774 231063 0.33 231837 137 877 226791 0.39 227668 138 807 223196 0.36 224003 139 836 218385 0.38 219221 140 726 213369 0.34 214095 141 704 209986 0.33 210690 142 751 205571 0.36 206322 143 776 201868 0.38 202644 144 706 198524 0.35 199230 145 699 192991 0.36 193690 146 691 190338 0.36 191029 147 704 185234 0.38 185938 148 637 180307 0.35 180944 149 545 163607 0.33 164152 150 435 0 100.00 435 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4767736 747220 86.45 5514956 2 3941593 976595 80.14 4918188 3 3418399 1772558 65.85 5190957 4 2926908 2178035 57.33 5104943 5 1965325 2518980 43.83 4484305 6 1469446 2706307 35.19 4175753 7 1064166 2798630 27.55 3862796 8 773767 2852440 21.34 3626207 9 545370 2973657 15.50 3519027 10 374504 3100205 10.78 3474709 11 246433 3306186 6.94 3552619 12 161384 3400936 4.53 3562320 13 106444 3451111 2.99 3557555 14 69417 3490124 1.95 3559541 15 47468 3522287 1.33 3569755 16 34862 3549214 0.97 3584076 17 28025 3565827 0.78 3593852 18 23741 3571823 0.66 3595564 19 21556 3565832 0.60 3587388 20 20717 3551203 0.58 3571920 21 19521 3530424 0.55 3549945 22 19848 3514951 0.56 3534799 23 19507 3492279 0.56 3511786 24 18420 3471543 0.53 3489963 25 17394 3452334 0.50 3469728 26 16692 3431957 0.48 3448649 27 15856 3414043 0.46 3429899 28 15119 3394365 0.44 3409484 29 14748 3379426 0.43 3394174 30 14068 3353214 0.42 3367282 31 13532 3335284 0.40 3348816 32 12928 3318243 0.39 3331171 33 12730 3292948 0.39 3305678 34 12181 3271290 0.37 3283471 35 11671 3256944 0.36 3268615 36 11592 3233979 0.36 3245571 37 11552 3214949 0.36 3226501 38 11138 3194632 0.35 3205770 39 10953 3173788 0.34 3184741 40 10947 3149601 0.35 3160548 41 10865 3128632 0.35 3139497 42 10782 3106989 0.35 3117771 43 10892 3084337 0.35 3095229 44 10619 3061501 0.35 3072120 45 10390 3034500 0.34 3044890 46 10527 3010337 0.35 3020864 47 10426 2988407 0.35 2998833 48 10372 2967512 0.35 2977884 49 10188 2941825 0.35 2952013 50 10041 2918323 0.34 2928364 51 9921 2894747 0.34 2904668 52 9958 2869838 0.35 2879796 53 9803 2843424 0.34 2853227 54 9693 2815972 0.34 2825665 55 9572 2791434 0.34 2801006 56 9727 2764761 0.35 2774488 57 9426 2742172 0.34 2751598 58 9480 2714671 0.35 2724151 59 9302 2693297 0.34 2702599 60 9162 2661343 0.34 2670505 61 9103 2638616 0.34 2647719 62 8958 2609867 0.34 2618825 63 8903 2588762 0.34 2597665 64 8711 2563459 0.34 2572170 65 8612 2535210 0.34 2543822 66 8748 2513905 0.35 2522653 67 8708 2486393 0.35 2495101 68 8587 2460168 0.35 2468755 69 8293 2435525 0.34 2443818 70 8275 2407123 0.34 2415398 71 8115 2381852 0.34 2389967 72 8051 2357848 0.34 2365899 73 8105 2329678 0.35 2337783 74 7853 2305607 0.34 2313460 75 8024 2276048 0.35 2284072 76 7733 2250378 0.34 2258111 77 7608 2225094 0.34 2232702 78 7758 2199930 0.35 2207688 79 7563 2170255 0.35 2177818 80 7377 2146115 0.34 2153492 81 7341 2119198 0.35 2126539 82 7352 2095459 0.35 2102811 83 7171 2068416 0.35 2075587 84 7104 2043791 0.35 2050895 85 7006 2017409 0.35 2024415 86 6907 1992763 0.35 1999670 87 6938 1967276 0.35 1974214 88 6609 1941610 0.34 1948219 89 6551 1917039 0.34 1923590 90 6648 1891850 0.35 1898498 91 6422 1866757 0.34 1873179 92 6385 1840425 0.35 1846810 93 6212 1814504 0.34 1820716 94 6303 1786818 0.35 1793121 95 6077 1764086 0.34 1770163 96 5973 1739618 0.34 1745591 97 5816 1714776 0.34 1720592 98 5792 1690821 0.34 1696613 99 5668 1666218 0.34 1671886 100 5655 1638958 0.34 1644613 101 5594 1619174 0.34 1624768 102 5359 1594210 0.34 1599569 103 5529 1567725 0.35 1573254 104 5223 1547399 0.34 1552622 105 5043 1520634 0.33 1525677 106 5117 1496803 0.34 1501920 107 5068 1476442 0.34 1481510 108 4992 1453134 0.34 1458126 109 4895 1430748 0.34 1435643 110 4877 1407324 0.35 1412201 111 4785 1386114 0.34 1390899 112 4695 1363407 0.34 1368102 113 4638 1343909 0.34 1348547 114 4595 1321439 0.35 1326034 115 4499 1299647 0.34 1304146 116 4459 1278696 0.35 1283155 117 4222 1257611 0.33 1261833 118 4280 1236711 0.34 1240991 119 4155 1214000 0.34 1218155 120 4131 1195074 0.34 1199205 121 4043 1173532 0.34 1177575 122 3949 1155122 0.34 1159071 123 3849 1133892 0.34 1137741 124 3891 1113258 0.35 1117149 125 3757 1095887 0.34 1099644 126 3684 1077605 0.34 1081289 127 3679 1057842 0.35 1061521 128 3568 1037955 0.34 1041523 129 3573 1021202 0.35 1024775 130 3353 1002077 0.33 1005430 131 3364 984497 0.34 987861 132 3256 967390 0.34 970646 133 3375 949778 0.35 953153 134 3214 932209 0.34 935423 135 3228 914038 0.35 917266 136 3089 896320 0.34 899409 137 3078 881920 0.35 884998 138 2984 863342 0.34 866326 139 3004 848378 0.35 851382 140 2843 831925 0.34 834768 141 2762 817652 0.34 820414 142 2780 800979 0.35 803759 143 2816 784421 0.36 787237 144 2667 770688 0.34 773355 145 2701 755722 0.36 758423 146 2515 740341 0.34 742856 147 2562 724736 0.35 727298 148 2350 705315 0.33 707665 149 2140 639158 0.33 641298 150 1573 0 100.00 1573