SRR18245600.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 43011933 lines in total Total number of methylation call strings processed: 86023866 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1450861467 Total methylated C's in CpG context: 22002003 Total methylated C's in CHG context: 7439648 Total methylated C's in CHH context: 30729431 Total C to T conversions in CpG context: 188790091 Total C to T conversions in CHG context: 255601127 Total C to T conversions in CHH context: 946299167 C methylated in CpG context: 10.4% C methylated in non-CpG context: 3.1%