CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 50434 916872 5.21 967306 2 121991 1042489 10.48 1164480 3 96790 718226 11.88 815016 4 88444 963221 8.41 1051665 5 101495 945501 9.69 1046996 6 115638 1124838 9.32 1240476 7 106392 934214 10.22 1040606 8 99604 927739 9.70 1027343 9 93088 893331 9.44 986419 10 89817 864075 9.42 953892 11 86836 891251 8.88 978087 12 85666 846299 9.19 931965 13 86396 852702 9.20 939098 14 87829 881122 9.06 968951 15 87853 893149 8.96 981002 16 88307 906984 8.87 995291 17 90815 910994 9.07 1001809 18 92239 925810 9.06 1018049 19 91714 917578 9.09 1009292 20 91545 926475 8.99 1018020 21 92344 926502 9.06 1018846 22 90972 919758 9.00 1010730 23 91574 916868 9.08 1008442 24 91780 919936 9.07 1011716 25 90035 913527 8.97 1003562 26 90001 907521 9.02 997522 27 90894 913294 9.05 1004188 28 90682 919550 8.98 1010232 29 90335 915418 8.98 1005753 30 91051 922852 8.98 1013903 31 89369 918401 8.87 1007770 32 90179 912082 9.00 1002261 33 90320 921110 8.93 1011430 34 88946 912490 8.88 1001436 35 89947 917260 8.93 1007207 36 90219 923701 8.90 1013920 37 88894 915208 8.85 1004102 38 90002 915660 8.95 1005662 39 90390 923339 8.92 1013729 40 90107 917621 8.94 1007728 41 89914 919453 8.91 1009367 42 90834 928305 8.91 1019139 43 89614 914965 8.92 1004579 44 90077 916553 8.95 1006630 45 89873 916740 8.93 1006613 46 88939 916112 8.85 1005051 47 89581 917262 8.90 1006843 48 89292 926290 8.79 1015582 49 90005 920116 8.91 1010121 50 89356 919093 8.86 1008449 51 89736 924350 8.85 1014086 52 89835 920084 8.90 1009919 53 89696 917381 8.91 1007077 54 89670 927702 8.81 1017372 55 89099 914809 8.88 1003908 56 88873 913973 8.86 1002846 57 89548 921444 8.86 1010992 58 88751 916611 8.83 1005362 59 89531 917061 8.89 1006592 60 89488 924067 8.83 1013555 61 88456 914898 8.82 1003354 62 89264 921985 8.83 1011249 63 89891 924866 8.86 1014757 64 88463 919951 8.77 1008414 65 89092 915102 8.87 1004194 66 88702 918998 8.80 1007700 67 88482 911303 8.85 999785 68 88866 916810 8.84 1005676 69 89742 917039 8.91 1006781 70 88119 915188 8.78 1003307 71 88889 916079 8.84 1004968 72 88844 920001 8.81 1008845 73 88596 915932 8.82 1004528 74 89071 917770 8.85 1006841 75 88867 919415 8.81 1008282 76 88577 917236 8.81 1005813 77 89465 918896 8.87 1008361 78 88916 917292 8.84 1006208 79 88507 913664 8.83 1002171 80 89063 914746 8.87 1003809 81 88675 917168 8.82 1005843 82 88863 914931 8.85 1003794 83 88846 914058 8.86 1002904 84 89570 919874 8.87 1009444 85 88688 918024 8.81 1006712 86 89256 912925 8.91 1002181 87 88322 916381 8.79 1004703 88 88367 911830 8.83 1000197 89 88271 911408 8.83 999679 90 88670 914546 8.84 1003216 91 88448 910667 8.85 999115 92 88675 910321 8.88 998996 93 88639 916511 8.82 1005150 94 88289 909567 8.85 997856 95 89110 910804 8.91 999914 96 89389 915355 8.90 1004744 97 88775 910896 8.88 999671 98 89243 911082 8.92 1000325 99 89054 911711 8.90 1000765 100 88574 910351 8.87 998925 101 88646 904772 8.92 993418 102 89059 913523 8.88 1002582 103 88215 904442 8.89 992657 104 88583 903637 8.93 992220 105 88646 910294 8.87 998940 106 88312 905823 8.88 994135 107 88582 903898 8.93 992480 108 89227 907778 8.95 997005 109 88308 900354 8.93 988662 110 88662 901872 8.95 990534 111 88910 903408 8.96 992318 112 88298 899627 8.94 987925 113 88368 901632 8.93 990000 114 88975 901574 8.98 990549 115 89037 898331 9.02 987368 116 88939 897668 9.01 986607 117 88847 899188 8.99 988035 118 88974 897376 9.02 986350 119 88374 895096 8.99 983470 120 89452 899705 9.04 989157 121 87889 894452 8.95 982341 122 88111 892272 8.99 980383 123 88969 893968 9.05 982937 124 88667 891807 9.04 980474 125 89019 888444 9.11 977463 126 89212 891631 9.10 980843 127 89168 886274 9.14 975442 128 89266 888219 9.13 977485 129 88712 887865 9.08 976577 130 88661 882214 9.13 970875 131 89332 883165 9.19 972497 132 90211 884853 9.25 975064 133 90166 880169 9.29 970335 134 89702 880882 9.24 970584 135 90095 882730 9.26 972825 136 90298 882293 9.28 972591 137 89487 877753 9.25 967240 138 90481 875325 9.37 965806 139 89807 873827 9.32 963634 140 89797 868074 9.37 957871 141 90420 869174 9.42 959594 142 89765 865137 9.40 954902 143 90640 863313 9.50 953953 144 90052 866469 9.41 956521 145 90449 858233 9.53 948682 146 90666 856265 9.57 946931 147 91388 861895 9.59 953283 148 90009 855368 9.52 945377 149 89877 848238 9.58 938115 150 87164 812049 9.69 899213 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 13187 1612277 0.81 1625464 2 11720 1179182 0.98 1190902 3 6617 1043371 0.63 1049988 4 5882 1282520 0.46 1288402 5 7313 1471587 0.49 1478900 6 7016 1358900 0.51 1365916 7 6541 1191253 0.55 1197794 8 5640 1187936 0.47 1193576 9 5430 1162281 0.47 1167711 10 5404 1171262 0.46 1176666 11 5254 1199286 0.44 1204540 12 5163 1206427 0.43 1211590 13 5187 1202548 0.43 1207735 14 5212 1208993 0.43 1214205 15 5192 1228814 0.42 1234006 16 5189 1240359 0.42 1245548 17 5492 1251617 0.44 1257109 18 5347 1250021 0.43 1255368 19 5335 1248603 0.43 1253938 20 5233 1254677 0.42 1259910 21 5362 1259883 0.42 1265245 22 5428 1253898 0.43 1259326 23 5248 1246541 0.42 1251789 24 5340 1244207 0.43 1249547 25 5399 1243106 0.43 1248505 26 5314 1242271 0.43 1247585 27 5460 1255360 0.43 1260820 28 5277 1249496 0.42 1254773 29 5432 1250722 0.43 1256154 30 5472 1260255 0.43 1265727 31 5410 1258430 0.43 1263840 32 5478 1259847 0.43 1265325 33 5517 1259923 0.44 1265440 34 5463 1256320 0.43 1261783 35 5553 1256470 0.44 1262023 36 5488 1263941 0.43 1269429 37 5622 1259541 0.44 1265163 38 5583 1266855 0.44 1272438 39 5484 1263502 0.43 1268986 40 5572 1261867 0.44 1267439 41 5575 1263943 0.44 1269518 42 5574 1268010 0.44 1273584 43 5531 1261287 0.44 1266818 44 5610 1257960 0.44 1263570 45 5449 1258229 0.43 1263678 46 5572 1254532 0.44 1260104 47 5556 1257604 0.44 1263160 48 5607 1265770 0.44 1271377 49 5726 1261709 0.45 1267435 50 5827 1257696 0.46 1263523 51 5733 1262725 0.45 1268458 52 5598 1260527 0.44 1266125 53 5799 1262299 0.46 1268098 54 5778 1264348 0.45 1270126 55 5593 1259525 0.44 1265118 56 5674 1253341 0.45 1259015 57 5710 1262006 0.45 1267716 58 5758 1263330 0.45 1269088 59 5866 1256666 0.46 1262532 60 5927 1267727 0.47 1273654 61 5964 1265994 0.47 1271958 62 5810 1263860 0.46 1269670 63 5883 1268586 0.46 1274469 64 6001 1259559 0.47 1265560 65 5786 1258210 0.46 1263996 66 5826 1258785 0.46 1264611 67 5793 1254137 0.46 1259930 68 5832 1257297 0.46 1263129 69 5825 1263274 0.46 1269099 70 6017 1255654 0.48 1261671 71 6069 1253730 0.48 1259799 72 6100 1262064 0.48 1268164 73 6026 1256161 0.48 1262187 74 6223 1258244 0.49 1264467 75 6029 1262599 0.48 1268628 76 6173 1261134 0.49 1267307 77 6287 1255593 0.50 1261880 78 6288 1262568 0.50 1268856 79 6304 1254937 0.50 1261241 80 6406 1256257 0.51 1262663 81 6409 1260314 0.51 1266723 82 6338 1254633 0.50 1260971 83 6446 1255134 0.51 1261580 84 6338 1266054 0.50 1272392 85 6551 1257558 0.52 1264109 86 6586 1251792 0.52 1258378 87 6629 1254091 0.53 1260720 88 6654 1252250 0.53 1258904 89 6572 1252115 0.52 1258687 90 6886 1255982 0.55 1262868 91 6748 1248367 0.54 1255115 92 6674 1246554 0.53 1253228 93 6750 1253608 0.54 1260358 94 7072 1251758 0.56 1258830 95 7184 1252961 0.57 1260145 96 7176 1254461 0.57 1261637 97 7099 1248925 0.57 1256024 98 7325 1245576 0.58 1252901 99 7371 1251364 0.59 1258735 100 7322 1246222 0.58 1253544 101 7461 1242491 0.60 1249952 102 7581 1247882 0.60 1255463 103 7660 1240016 0.61 1247676 104 7746 1244209 0.62 1251955 105 7913 1245356 0.63 1253269 106 8056 1243556 0.64 1251612 107 7959 1237950 0.64 1245909 108 8193 1244724 0.65 1252917 109 8244 1238987 0.66 1247231 110 8495 1241180 0.68 1249675 111 8646 1241326 0.69 1249972 112 8603 1242584 0.69 1251187 113 8828 1235374 0.71 1244202 114 8920 1236792 0.72 1245712 115 9080 1229379 0.73 1238459 116 9224 1232731 0.74 1241955 117 9260 1234157 0.74 1243417 118 9619 1233838 0.77 1243457 119 9891 1230909 0.80 1240800 120 9852 1234655 0.79 1244507 121 10336 1227241 0.84 1237577 122 10311 1225054 0.83 1235365 123 10424 1228097 0.84 1238521 124 10798 1225071 0.87 1235869 125 11044 1225125 0.89 1236169 126 11327 1224805 0.92 1236132 127 11506 1219391 0.93 1230897 128 11996 1215051 0.98 1227047 129 12110 1213868 0.99 1225978 130 12309 1210163 1.01 1222472 131 12565 1205539 1.03 1218104 132 12842 1213257 1.05 1226099 133 13325 1206525 1.09 1219850 134 13642 1203890 1.12 1217532 135 13662 1203733 1.12 1217395 136 14203 1198053 1.17 1212256 137 14529 1193114 1.20 1207643 138 14892 1196581 1.23 1211473 139 15297 1188731 1.27 1204028 140 15260 1190861 1.27 1206121 141 15712 1187634 1.31 1203346 142 16140 1183492 1.35 1199632 143 16663 1181014 1.39 1197677 144 17285 1183189 1.44 1200474 145 17579 1179502 1.47 1197081 146 18916 1177507 1.58 1196423 147 19255 1175505 1.61 1194760 148 20202 1166258 1.70 1186460 149 26075 1168058 2.18 1194133 150 23445 1103188 2.08 1126633 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 22144 4264580 0.52 4286724 2 47583 3793247 1.24 3840830 3 22598 3488413 0.64 3511011 4 21359 4322460 0.49 4343819 5 23537 4445820 0.53 4469357 6 21819 4419204 0.49 4441023 7 21839 3989814 0.54 4011653 8 19895 4171456 0.47 4191351 9 19888 4270960 0.46 4290848 10 18501 4313439 0.43 4331940 11 18481 4495603 0.41 4514084 12 17916 4483379 0.40 4501295 13 17527 4473193 0.39 4490720 14 17896 4488931 0.40 4506827 15 18383 4478216 0.41 4496599 16 18558 4441872 0.42 4460430 17 18928 4436590 0.42 4455518 18 19415 4473487 0.43 4492902 19 19773 4473758 0.44 4493531 20 19785 4492917 0.44 4512702 21 20040 4520409 0.44 4540449 22 20240 4480194 0.45 4500434 23 20538 4476496 0.46 4497034 24 20674 4512318 0.46 4532992 25 20856 4512334 0.46 4533190 26 20910 4532013 0.46 4552923 27 21213 4559604 0.46 4580817 28 21511 4550503 0.47 4572014 29 21295 4569722 0.46 4591017 30 21808 4602039 0.47 4623847 31 21259 4587417 0.46 4608676 32 20981 4582587 0.46 4603568 33 21323 4609603 0.46 4630926 34 20702 4577384 0.45 4598086 35 20377 4586400 0.44 4606777 36 20399 4607584 0.44 4627983 37 20402 4593161 0.44 4613563 38 20451 4595732 0.44 4616183 39 20618 4619676 0.44 4640294 40 20440 4608734 0.44 4629174 41 20304 4603716 0.44 4624020 42 20368 4621828 0.44 4642196 43 20494 4592981 0.44 4613475 44 20236 4592194 0.44 4612430 45 20878 4601284 0.45 4622162 46 20731 4593478 0.45 4614209 47 20128 4593856 0.44 4613984 48 20380 4609803 0.44 4630183 49 20578 4585901 0.45 4606479 50 20560 4589874 0.45 4610434 51 20600 4608876 0.44 4629476 52 20634 4594670 0.45 4615304 53 20756 4585956 0.45 4606712 54 20819 4609173 0.45 4629992 55 21108 4588387 0.46 4609495 56 20771 4589187 0.45 4609958 57 21108 4615970 0.46 4637078 58 21408 4604145 0.46 4625553 59 21452 4595408 0.46 4616860 60 21500 4613789 0.46 4635289 61 21398 4590430 0.46 4611828 62 21488 4595879 0.47 4617367 63 21628 4605232 0.47 4626860 64 21758 4585697 0.47 4607455 65 21546 4581103 0.47 4602649 66 21848 4602853 0.47 4624701 67 21829 4586946 0.47 4608775 68 22031 4587959 0.48 4609990 69 21999 4602345 0.48 4624344 70 22143 4597684 0.48 4619827 71 22617 4593224 0.49 4615841 72 22636 4613409 0.49 4636045 73 22215 4591339 0.48 4613554 74 22619 4593452 0.49 4616071 75 23133 4602504 0.50 4625637 76 23019 4584516 0.50 4607535 77 22873 4584203 0.50 4607076 78 23456 4602899 0.51 4626355 79 23406 4580970 0.51 4604376 80 23331 4573466 0.51 4596797 81 23953 4591895 0.52 4615848 82 23631 4578788 0.51 4602419 83 23719 4578634 0.52 4602353 84 24416 4594355 0.53 4618771 85 24273 4563004 0.53 4587277 86 24572 4567943 0.54 4592515 87 24891 4586396 0.54 4611287 88 25031 4578164 0.54 4603195 89 25104 4579809 0.55 4604913 90 25529 4589133 0.55 4614662 91 25632 4568816 0.56 4594448 92 25847 4565555 0.56 4591402 93 25982 4580556 0.56 4606538 94 26311 4562248 0.57 4588559 95 26794 4559601 0.58 4586395 96 26865 4571535 0.58 4598400 97 27297 4553197 0.60 4580494 98 27637 4556144 0.60 4583781 99 28208 4569734 0.61 4597942 100 28346 4559594 0.62 4587940 101 28687 4561454 0.62 4590141 102 29309 4573613 0.64 4602922 103 29420 4550897 0.64 4580317 104 29892 4552812 0.65 4582704 105 30431 4562462 0.66 4592893 106 30634 4544484 0.67 4575118 107 31228 4547626 0.68 4578854 108 31933 4553939 0.70 4585872 109 32424 4539389 0.71 4571813 110 32795 4538832 0.72 4571627 111 33068 4542098 0.72 4575166 112 33952 4533324 0.74 4567276 113 34814 4523231 0.76 4558045 114 35347 4527648 0.77 4562995 115 36129 4520762 0.79 4556891 116 36861 4509437 0.81 4546298 117 37658 4525288 0.83 4562946 118 38227 4503608 0.84 4541835 119 38743 4497645 0.85 4536388 120 39971 4510557 0.88 4550528 121 40504 4496371 0.89 4536875 122 41662 4498166 0.92 4539828 123 42626 4516327 0.93 4558953 124 43778 4495538 0.96 4539316 125 44672 4485647 0.99 4530319 126 45861 4492465 1.01 4538326 127 47089 4463805 1.04 4510894 128 47810 4462484 1.06 4510294 129 48998 4462512 1.09 4511510 130 49938 4453062 1.11 4503000 131 51498 4455880 1.14 4507378 132 53091 4458801 1.18 4511892 133 54012 4442612 1.20 4496624 134 55563 4427633 1.24 4483196 135 56686 4428329 1.26 4485015 136 58168 4408600 1.30 4466768 137 60036 4402607 1.35 4462643 138 61402 4404082 1.38 4465484 139 62551 4389218 1.41 4451769 140 64224 4387715 1.44 4451939 141 66242 4378984 1.49 4445226 142 67062 4366230 1.51 4433292 143 69514 4357718 1.57 4427232 144 71696 4372338 1.61 4444034 145 74720 4354642 1.69 4429362 146 77464 4349200 1.75 4426664 147 82493 4347765 1.86 4430258 148 83278 4318503 1.89 4401781 149 81604 4276932 1.87 4358536 150 77153 4085822 1.85 4162975 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1652654 252956 86.73 1905610 2 566669 128424 81.52 695093 3 433762 201027 68.33 634789 4 503980 337776 59.87 841756 5 343230 385621 47.09 728851 6 262525 426846 38.08 689371 7 203191 526183 27.86 729374 8 179133 601235 22.95 780368 9 152981 667354 18.65 820335 10 131798 708771 15.68 840569 11 113359 753349 13.08 866708 12 101575 759958 11.79 861533 13 93239 765909 10.85 859148 14 88148 770255 10.27 858403 15 83035 770113 9.73 853148 16 80056 769316 9.43 849372 17 80296 767403 9.47 847699 18 79199 764052 9.39 843251 19 78907 759414 9.41 838321 20 79261 759822 9.45 839083 21 78957 759452 9.42 838409 22 79079 759235 9.43 838314 23 79156 757132 9.47 836288 24 77663 756481 9.31 834144 25 77877 756121 9.34 833998 26 78006 755769 9.36 833775 27 76917 753599 9.26 830516 28 76442 753171 9.21 829613 29 75995 749393 9.21 825388 30 75713 746676 9.21 822389 31 75620 744503 9.22 820123 32 74899 742279 9.17 817178 33 74746 738374 9.19 813120 34 74138 734691 9.17 808829 35 73480 732067 9.12 805547 36 72765 728626 9.08 801391 37 71824 723540 9.03 795364 38 71668 718401 9.07 790069 39 71411 712797 9.11 784208 40 70684 707990 9.08 778674 41 70179 703540 9.07 773719 42 69618 698557 9.06 768175 43 68754 693124 9.02 761878 44 68249 689139 9.01 757388 45 68196 683142 9.08 751338 46 67330 678732 9.02 746062 47 67072 672278 9.07 739350 48 65916 666337 9.00 732253 49 65072 662449 8.94 727521 50 64622 656108 8.97 720730 51 64168 650338 8.98 714506 52 63517 644670 8.97 708187 53 62525 638876 8.91 701401 54 62245 633138 8.95 695383 55 60992 626159 8.88 687151 56 60486 620362 8.88 680848 57 60416 614692 8.95 675108 58 58824 608023 8.82 666847 59 59100 602081 8.94 661181 60 58505 592799 8.98 651304 61 57193 586737 8.88 643930 62 56808 579973 8.92 636781 63 56024 572295 8.92 628319 64 55500 564965 8.94 620465 65 54632 560350 8.88 614982 66 53914 553057 8.88 606971 67 53291 547360 8.87 600651 68 52385 538883 8.86 591268 69 52181 531262 8.94 583443 70 51069 525553 8.86 576622 71 50613 518124 8.90 568737 72 49568 511965 8.83 561533 73 49510 504473 8.94 553983 74 48091 497462 8.82 545553 75 47496 489890 8.84 537386 76 46536 482542 8.80 529078 77 45667 475355 8.76 521022 78 45350 468163 8.83 513513 79 44710 460790 8.84 505500 80 43904 455096 8.80 499000 81 43652 446897 8.90 490549 82 42756 440455 8.85 483211 83 42099 432261 8.87 474360 84 41201 424893 8.84 466094 85 40599 418125 8.85 458724 86 39803 411075 8.83 450878 87 39285 405133 8.84 444418 88 38508 398776 8.81 437284 89 37985 391663 8.84 429648 90 36905 384877 8.75 421782 91 36615 378195 8.83 414810 92 35943 372994 8.79 408937 93 35078 364343 8.78 399421 94 34655 358444 8.82 393099 95 33837 352021 8.77 385858 96 33545 345113 8.86 378658 97 32587 338228 8.79 370815 98 32128 332543 8.81 364671 99 31192 325453 8.75 356645 100 31032 321031 8.81 352063 101 30596 313834 8.88 344430 102 30024 307983 8.88 338007 103 29279 300943 8.87 330222 104 28523 296973 8.76 325496 105 28012 289988 8.81 318000 106 27272 283902 8.76 311174 107 26654 278458 8.74 305112 108 26370 272467 8.82 298837 109 25705 267102 8.78 292807 110 25111 262511 8.73 287622 111 24547 256564 8.73 281111 112 24226 250802 8.81 275028 113 23651 245541 8.79 269192 114 22977 240436 8.72 263413 115 22920 235839 8.86 258759 116 22049 230644 8.73 252693 117 21498 225574 8.70 247072 118 21218 221734 8.73 242952 119 20619 216010 8.71 236629 120 20075 211338 8.67 231413 121 19654 206182 8.70 225836 122 19447 201593 8.80 221040 123 18970 197807 8.75 216777 124 18637 193192 8.80 211829 125 18124 188864 8.76 206988 126 17811 184129 8.82 201940 127 17469 179988 8.85 197457 128 16838 176893 8.69 193731 129 16523 173138 8.71 189661 130 16228 168554 8.78 184782 131 15817 165306 8.73 181123 132 15297 161468 8.65 176765 133 15187 157928 8.77 173115 134 14804 154376 8.75 169180 135 14268 149384 8.72 163652 136 13989 146570 8.71 160559 137 13665 143211 8.71 156876 138 13446 140847 8.71 154293 139 12920 137222 8.61 150142 140 12888 133741 8.79 146629 141 12306 130411 8.62 142717 142 12179 127579 8.71 139758 143 11598 124578 8.52 136176 144 11513 121435 8.66 132948 145 11343 119016 8.70 130359 146 11126 116780 8.70 127906 147 10787 112717 8.73 123504 148 10551 109779 8.77 120330 149 10033 99545 9.16 109578 150 9348 0 100.00 9348 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1880650 286630 86.77 2167280 2 1666440 414130 80.10 2080570 3 501606 228464 68.71 730070 4 491722 344520 58.80 836242 5 404691 510584 44.22 915275 6 270325 504974 34.87 775299 7 202978 567668 26.34 770646 8 141121 685286 17.08 826407 9 102521 803120 11.32 905641 10 71635 897188 7.39 968823 11 49096 972566 4.81 1021662 12 32818 1008645 3.15 1041463 13 22411 1020144 2.15 1042555 14 15733 1032517 1.50 1048250 15 11113 1043446 1.05 1054559 16 8994 1050649 0.85 1059643 17 8093 1054837 0.76 1062930 18 6632 1051172 0.63 1057804 19 6939 1041676 0.66 1048615 20 6340 1034539 0.61 1040879 21 5911 1030125 0.57 1036036 22 6369 1033564 0.61 1039933 23 5468 1031919 0.53 1037387 24 4931 1028347 0.48 1033278 25 5060 1025937 0.49 1030997 26 4960 1027054 0.48 1032014 27 4762 1024635 0.46 1029397 28 5032 1022792 0.49 1027824 29 4440 1020992 0.43 1025432 30 4406 1017028 0.43 1021434 31 4323 1011770 0.43 1016093 32 4400 1010049 0.43 1014449 33 4279 1004578 0.42 1008857 34 4225 998971 0.42 1003196 35 4135 996313 0.41 1000448 36 4224 989766 0.42 993990 37 4243 985928 0.43 990171 38 4008 979288 0.41 983296 39 3956 974068 0.40 978024 40 3928 967554 0.40 971482 41 3991 960626 0.41 964617 42 3963 952330 0.41 956293 43 3877 945631 0.41 949508 44 3726 937935 0.40 941661 45 3887 929743 0.42 933630 46 3771 924481 0.41 928252 47 3699 915969 0.40 919668 48 3659 906740 0.40 910399 49 3717 899612 0.41 903329 50 3671 890573 0.41 894244 51 3675 880803 0.42 884478 52 3624 873391 0.41 877015 53 3641 866457 0.42 870098 54 3610 854930 0.42 858540 55 3428 846943 0.40 850371 56 3513 839617 0.42 843130 57 3495 829688 0.42 833183 58 3502 822341 0.42 825843 59 3398 811466 0.42 814864 60 3180 802598 0.39 805778 61 3145 793522 0.39 796667 62 3281 784448 0.42 787729 63 3232 773979 0.42 777211 64 3024 764074 0.39 767098 65 3069 755834 0.40 758903 66 3024 747079 0.40 750103 67 2994 737565 0.40 740559 68 3052 728182 0.42 731234 69 3074 718560 0.43 721634 70 2754 708644 0.39 711398 71 2908 699800 0.41 702708 72 2822 688784 0.41 691606 73 2763 679480 0.40 682243 74 2719 670333 0.40 673052 75 2790 659778 0.42 662568 76 2631 649603 0.40 652234 77 2549 640724 0.40 643273 78 2590 631313 0.41 633903 79 2573 622207 0.41 624780 80 2498 613399 0.41 615897 81 2413 603713 0.40 606126 82 2262 593542 0.38 595804 83 2368 584676 0.40 587044 84 2379 573975 0.41 576354 85 2279 566390 0.40 568669 86 2205 555607 0.40 557812 87 2136 546705 0.39 548841 88 2272 536686 0.42 538958 89 2176 529512 0.41 531688 90 2112 519056 0.41 521168 91 2110 510974 0.41 513084 92 1987 501156 0.39 503143 93 2036 492636 0.41 494672 94 1994 483505 0.41 485499 95 1992 474965 0.42 476957 96 1905 465059 0.41 466964 97 1874 457592 0.41 459466 98 1875 449192 0.42 451067 99 1887 439664 0.43 441551 100 1840 431085 0.43 432925 101 1730 422997 0.41 424727 102 1780 416044 0.43 417824 103 1755 408687 0.43 410442 104 1644 400475 0.41 402119 105 1696 391176 0.43 392872 106 1596 383361 0.41 384957 107 1491 375938 0.40 377429 108 1510 368430 0.41 369940 109 1552 361048 0.43 362600 110 1432 354244 0.40 355676 111 1391 346840 0.40 348231 112 1390 339694 0.41 341084 113 1444 331280 0.43 332724 114 1367 326770 0.42 328137 115 1340 319263 0.42 320603 116 1280 311679 0.41 312959 117 1299 305517 0.42 306816 118 1207 297858 0.40 299065 119 1300 292880 0.44 294180 120 1242 285808 0.43 287050 121 1151 279366 0.41 280517 122 1186 273163 0.43 274349 123 1036 268104 0.38 269140 124 1101 261864 0.42 262965 125 1105 255507 0.43 256612 126 1079 249930 0.43 251009 127 1029 245139 0.42 246168 128 995 239332 0.41 240327 129 1020 233317 0.44 234337 130 945 229376 0.41 230321 131 917 223695 0.41 224612 132 912 218816 0.42 219728 133 883 214073 0.41 214956 134 896 209508 0.43 210404 135 896 204199 0.44 205095 136 860 198138 0.43 198998 137 863 195383 0.44 196246 138 788 189469 0.41 190257 139 820 186134 0.44 186954 140 811 182429 0.44 183240 141 748 177232 0.42 177980 142 777 172187 0.45 172964 143 767 170321 0.45 171088 144 666 164530 0.40 165196 145 719 161542 0.44 162261 146 676 157731 0.43 158407 147 719 153722 0.47 154441 148 638 149025 0.43 149663 149 564 136973 0.41 137537 150 456 0 100.00 456 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 5312259 806775 86.82 6119034 2 4407887 1080199 80.32 5488086 3 3850774 1969092 66.17 5819866 4 3309911 2429869 57.67 5739780 5 2217927 2818728 44.04 5036655 6 1657173 3041233 35.27 4698406 7 1198901 3159940 27.51 4358841 8 867011 3216718 21.23 4083729 9 606993 3359936 15.30 3966929 10 415566 3498573 10.62 3914139 11 272851 3733796 6.81 4006647 12 178778 3828762 4.46 4007540 13 117845 3888384 2.94 4006229 14 77179 3929002 1.93 4006181 15 52825 3969622 1.31 4022447 16 39537 4003798 0.98 4043335 17 32296 4033287 0.79 4065583 18 28070 4045256 0.69 4073326 19 25728 4037548 0.63 4063276 20 24494 4014275 0.61 4038769 21 23765 3990233 0.59 4013998 22 23661 3967620 0.59 3991281 23 23342 3949942 0.59 3973284 24 22292 3924075 0.56 3946367 25 21401 3899923 0.55 3921324 26 20289 3877022 0.52 3897311 27 19150 3850008 0.49 3869158 28 18992 3832000 0.49 3850992 29 18423 3807767 0.48 3826190 30 17915 3790896 0.47 3808811 31 17101 3763224 0.45 3780325 32 16479 3744530 0.44 3761009 33 16169 3718446 0.43 3734615 34 15700 3696878 0.42 3712578 35 15330 3675985 0.42 3691315 36 15161 3652393 0.41 3667554 37 15075 3634269 0.41 3649344 38 14637 3605583 0.40 3620220 39 14764 3581927 0.41 3596691 40 14131 3561622 0.40 3575753 41 14344 3530737 0.40 3545081 42 14033 3503930 0.40 3517963 43 14094 3477954 0.40 3492048 44 13801 3450326 0.40 3464127 45 13861 3418415 0.40 3432276 46 13449 3391485 0.39 3404934 47 13586 3361438 0.40 3375024 48 13368 3331544 0.40 3344912 49 13252 3302927 0.40 3316179 50 13383 3272377 0.41 3285760 51 12936 3241470 0.40 3254406 52 12660 3209020 0.39 3221680 53 12465 3179494 0.39 3191959 54 12542 3144206 0.40 3156748 55 12454 3109577 0.40 3122031 56 12510 3080240 0.40 3092750 57 12240 3045920 0.40 3058160 58 11973 3012860 0.40 3024833 59 12015 2977594 0.40 2989609 60 11812 2942488 0.40 2954300 61 11732 2908608 0.40 2920340 62 11579 2873924 0.40 2885503 63 11328 2842830 0.40 2854158 64 11176 2806709 0.40 2817885 65 11163 2772947 0.40 2784110 66 11124 2738969 0.40 2750093 67 10771 2703737 0.40 2714508 68 10729 2668912 0.40 2679641 69 10493 2634698 0.40 2645191 70 10356 2598041 0.40 2608397 71 10425 2564218 0.40 2574643 72 10262 2527752 0.40 2538014 73 10016 2494908 0.40 2504924 74 9829 2458324 0.40 2468153 75 9751 2421803 0.40 2431554 76 9609 2387451 0.40 2397060 77 9377 2351603 0.40 2360980 78 9283 2314373 0.40 2323656 79 9067 2277901 0.40 2286968 80 9089 2244260 0.40 2253349 81 8947 2207821 0.40 2216768 82 8796 2176163 0.40 2184959 83 8640 2141963 0.40 2150603 84 8488 2107999 0.40 2116487 85 8387 2072345 0.40 2080732 86 8076 2041256 0.39 2049332 87 7829 2004684 0.39 2012513 88 8137 1969486 0.41 1977623 89 7870 1936611 0.40 1944481 90 7757 1902164 0.41 1909921 91 7536 1870214 0.40 1877750 92 7413 1838035 0.40 1845448 93 7298 1803192 0.40 1810490 94 7037 1770931 0.40 1777968 95 7140 1740505 0.41 1747645 96 6788 1707126 0.40 1713914 97 6681 1674797 0.40 1681478 98 6723 1645555 0.41 1652278 99 6507 1613589 0.40 1620096 100 6299 1580953 0.40 1587252 101 6353 1549054 0.41 1555407 102 6125 1517697 0.40 1523822 103 6056 1491108 0.40 1497164 104 5918 1462489 0.40 1468407 105 5996 1432844 0.42 1438840 106 5691 1402722 0.40 1408413 107 5673 1377958 0.41 1383631 108 5400 1347426 0.40 1352826 109 5254 1321156 0.40 1326410 110 5136 1294561 0.40 1299697 111 5068 1268126 0.40 1273194 112 4982 1239935 0.40 1244917 113 5025 1215499 0.41 1220524 114 4685 1189499 0.39 1194184 115 4752 1162717 0.41 1167469 116 4667 1142034 0.41 1146701 117 4545 1115333 0.41 1119878 118 4586 1092325 0.42 1096911 119 4371 1067494 0.41 1071865 120 4272 1045508 0.41 1049780 121 4109 1021501 0.40 1025610 122 4083 999588 0.41 1003671 123 4039 977200 0.41 981239 124 4016 956212 0.42 960228 125 3824 934356 0.41 938180 126 3787 915050 0.41 918837 127 3684 893414 0.41 897098 128 3542 875008 0.40 878550 129 3437 854351 0.40 857788 130 3469 836080 0.41 839549 131 3349 818828 0.41 822177 132 3286 800091 0.41 803377 133 3244 781593 0.41 784837 134 3169 764309 0.41 767478 135 3078 745828 0.41 748906 136 2970 729268 0.41 732238 137 2921 712104 0.41 715025 138 2891 695981 0.41 698872 139 2772 678255 0.41 681027 140 2711 664548 0.41 667259 141 2693 649915 0.41 652608 142 2651 632769 0.42 635420 143 2631 618216 0.42 620847 144 2548 605952 0.42 608500 145 2424 590250 0.41 592674 146 2413 576814 0.42 579227 147 2272 561370 0.40 563642 148 2213 545096 0.40 547309 149 1989 502792 0.39 504781 150 1427 0 100.00 1427