CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 58529 966785 5.71 1025314 2 136752 1135892 10.75 1272644 3 103880 725858 12.52 829738 4 95382 1011047 8.62 1106429 5 111313 997947 10.03 1109260 6 130649 1204508 9.79 1335157 7 118733 980806 10.80 1099539 8 110851 964440 10.31 1075291 9 103671 935995 9.97 1039666 10 100345 902611 10.00 1002956 11 97378 930181 9.48 1027559 12 96316 881386 9.85 977702 13 96356 888648 9.78 985004 14 97790 916426 9.64 1014216 15 97257 929129 9.48 1026386 16 98068 943259 9.42 1041327 17 99943 951199 9.51 1051142 18 102602 967227 9.59 1069829 19 102002 960436 9.60 1062438 20 102399 963542 9.61 1065941 21 102912 963154 9.65 1066066 22 102380 957400 9.66 1059780 23 102667 951101 9.74 1053768 24 103974 960866 9.76 1064840 25 101626 947941 9.68 1049567 26 102353 943347 9.79 1045700 27 102303 949086 9.73 1051389 28 102427 950181 9.73 1052608 29 102469 948019 9.75 1050488 30 103554 952895 9.80 1056449 31 102119 944311 9.76 1046430 32 102915 943707 9.83 1046622 33 103616 949031 9.84 1052647 34 102026 940029 9.79 1042055 35 101407 943316 9.71 1044723 36 102207 950617 9.71 1052824 37 101435 938600 9.75 1040035 38 100974 942290 9.68 1043264 39 102478 949117 9.75 1051595 40 102108 941160 9.79 1043268 41 102172 941538 9.79 1043710 42 102628 948634 9.76 1051262 43 101682 938187 9.78 1039869 44 101972 937487 9.81 1039459 45 100962 938082 9.72 1039044 46 100658 935138 9.72 1035796 47 100831 934603 9.74 1035434 48 101377 943762 9.70 1045139 49 100916 937865 9.71 1038781 50 101144 933272 9.78 1034416 51 101203 936733 9.75 1037936 52 100043 933151 9.68 1033194 53 100618 929454 9.77 1030072 54 100012 932528 9.69 1032540 55 99265 929624 9.65 1028889 56 99958 925919 9.74 1025877 57 100323 930734 9.73 1031057 58 99213 922474 9.71 1021687 59 99277 924403 9.70 1023680 60 99734 928032 9.70 1027766 61 98613 920070 9.68 1018683 62 99141 923048 9.70 1022189 63 99888 925718 9.74 1025606 64 99417 921880 9.73 1021297 65 99305 917989 9.76 1017294 66 99342 922289 9.72 1021631 67 98743 909958 9.79 1008701 68 98860 916521 9.74 1015381 69 98987 915623 9.76 1014610 70 98275 912398 9.72 1010673 71 98346 912420 9.73 1010766 72 98550 915021 9.72 1013571 73 98100 909767 9.73 1007867 74 98573 912082 9.75 1010655 75 97969 911986 9.70 1009955 76 98264 907775 9.77 1006039 77 98708 907601 9.81 1006309 78 98187 909236 9.75 1007423 79 97696 902069 9.77 999765 80 98099 902764 9.80 1000863 81 97828 904151 9.76 1001979 82 97318 899717 9.76 997035 83 97777 899675 9.80 997452 84 97794 903632 9.77 1001426 85 97486 898797 9.78 996283 86 97682 897788 9.81 995470 87 98127 896772 9.86 994899 88 96960 893084 9.79 990044 89 97063 888597 9.85 985660 90 97004 891634 9.81 988638 91 96260 887004 9.79 983264 92 96683 887640 9.82 984323 93 97411 888434 9.88 985845 94 96966 886500 9.86 983466 95 96870 884717 9.87 981587 96 96515 888334 9.80 984849 97 96608 882951 9.86 979559 98 97082 880427 9.93 977509 99 96939 882198 9.90 979137 100 96338 877250 9.90 973588 101 95976 871882 9.92 967858 102 96296 873889 9.93 970185 103 95422 869555 9.89 964977 104 96335 868555 9.98 964890 105 96279 870550 9.96 966829 106 96058 864589 10.00 960647 107 95950 863789 10.00 959739 108 96219 862664 10.03 958883 109 95682 859017 10.02 954699 110 95682 856176 10.05 951858 111 95898 857585 10.06 953483 112 96045 854101 10.11 950146 113 95310 853231 10.05 948541 114 96524 853585 10.16 950109 115 96077 847463 10.18 943540 116 96002 846955 10.18 942957 117 96333 845229 10.23 941562 118 96143 840634 10.26 936777 119 96132 837985 10.29 934117 120 96253 839268 10.29 935521 121 95103 831650 10.26 926753 122 95254 829761 10.30 925015 123 95304 828345 10.32 923649 124 95091 825466 10.33 920557 125 95595 820654 10.43 916249 126 96270 821664 10.49 917934 127 95986 814927 10.54 910913 128 95706 814246 10.52 909952 129 95722 813081 10.53 908803 130 94927 807349 10.52 902276 131 96011 804392 10.66 900403 132 95510 803648 10.62 899158 133 95622 797211 10.71 892833 134 96242 797675 10.77 893917 135 95691 793216 10.77 888907 136 95620 790024 10.80 885644 137 95691 784370 10.87 880061 138 95760 782309 10.91 878069 139 94721 775992 10.88 870713 140 95243 771488 10.99 866731 141 94879 769229 10.98 864108 142 94046 763970 10.96 858016 143 94905 760933 11.09 855838 144 94760 760366 11.08 855126 145 95035 752565 11.21 847600 146 95479 748887 11.31 844366 147 96874 751668 11.42 848542 148 94817 742955 11.32 837772 149 95497 737559 11.46 833056 150 100753 707317 12.47 808070 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 22871 2082605 1.09 2105476 2 15653 1308031 1.18 1323684 3 8492 1119450 0.75 1127942 4 7301 1394391 0.52 1401692 5 9192 1651639 0.55 1660831 6 9354 1513560 0.61 1522914 7 7522 1300980 0.57 1308502 8 6680 1299489 0.51 1306169 9 6347 1271474 0.50 1277821 10 6316 1275354 0.49 1281670 11 6489 1307476 0.49 1313965 12 5899 1313997 0.45 1319896 13 5522 1310381 0.42 1315903 14 5674 1314706 0.43 1320380 15 5589 1334567 0.42 1340156 16 5601 1350095 0.41 1355696 17 5774 1368523 0.42 1374297 18 5649 1361858 0.41 1367507 19 6050 1360907 0.44 1366957 20 6262 1366062 0.46 1372324 21 6992 1372489 0.51 1379481 22 7400 1360019 0.54 1367419 23 7824 1354164 0.57 1361988 24 7968 1348620 0.59 1356588 25 8766 1344319 0.65 1353085 26 9142 1342034 0.68 1351176 27 9539 1355885 0.70 1365424 28 9825 1352982 0.72 1362807 29 11099 1348241 0.82 1359340 30 11800 1356507 0.86 1368307 31 11445 1355022 0.84 1366467 32 11441 1356965 0.84 1368406 33 11188 1353549 0.82 1364737 34 11175 1348153 0.82 1359328 35 10805 1346837 0.80 1357642 36 10492 1353438 0.77 1363930 37 10434 1350410 0.77 1360844 38 10715 1356875 0.78 1367590 39 11063 1355385 0.81 1366448 40 11061 1352643 0.81 1363704 41 11009 1347229 0.81 1358238 42 10982 1351836 0.81 1362818 43 11098 1344263 0.82 1355361 44 11086 1341155 0.82 1352241 45 11261 1340475 0.83 1351736 46 11119 1333647 0.83 1344766 47 11105 1334042 0.83 1345147 48 11355 1342012 0.84 1353367 49 11690 1337029 0.87 1348719 50 11802 1333831 0.88 1345633 51 11567 1339239 0.86 1350806 52 11783 1333663 0.88 1345446 53 11662 1334836 0.87 1346498 54 11894 1333931 0.88 1345825 55 11875 1326598 0.89 1338473 56 11732 1323618 0.88 1335350 57 12159 1323456 0.91 1335615 58 12025 1325506 0.90 1337531 59 12281 1321292 0.92 1333573 60 12347 1329021 0.92 1341368 61 12245 1325704 0.92 1337949 62 12493 1324510 0.93 1337003 63 12501 1327500 0.93 1340001 64 12496 1317991 0.94 1330487 65 12574 1311008 0.95 1323582 66 12550 1308140 0.95 1320690 67 12318 1307732 0.93 1320050 68 12600 1307233 0.95 1319833 69 12768 1314154 0.96 1326922 70 12883 1307795 0.98 1320678 71 12736 1302267 0.97 1315003 72 13001 1306213 0.99 1319214 73 12726 1301059 0.97 1313785 74 13473 1300472 1.03 1313945 75 13144 1303201 1.00 1316345 76 13266 1301073 1.01 1314339 77 13479 1293579 1.03 1307058 78 13230 1298734 1.01 1311964 79 13318 1293757 1.02 1307075 80 13501 1290409 1.04 1303910 81 13668 1291513 1.05 1305181 82 13732 1287740 1.06 1301472 83 13782 1285494 1.06 1299276 84 14019 1290530 1.07 1304549 85 13839 1286239 1.06 1300078 86 13899 1280052 1.07 1293951 87 14088 1278370 1.09 1292458 88 14365 1272950 1.12 1287315 89 14229 1271083 1.11 1285312 90 14577 1273031 1.13 1287608 91 14586 1268652 1.14 1283238 92 14693 1264568 1.15 1279261 93 14961 1269642 1.16 1284603 94 15277 1268166 1.19 1283443 95 15125 1263532 1.18 1278657 96 15363 1262889 1.20 1278252 97 15375 1257356 1.21 1272731 98 15666 1252555 1.24 1268221 99 15748 1254626 1.24 1270374 100 15636 1250587 1.23 1266223 101 16170 1242147 1.29 1258317 102 16746 1242663 1.33 1259409 103 16570 1238900 1.32 1255470 104 16756 1237843 1.34 1254599 105 17032 1238468 1.36 1255500 106 17388 1235298 1.39 1252686 107 17457 1226039 1.40 1243496 108 17846 1231383 1.43 1249229 109 18236 1225104 1.47 1243340 110 18547 1224505 1.49 1243052 111 18380 1224068 1.48 1242448 112 18849 1219735 1.52 1238584 113 19423 1212970 1.58 1232393 114 19647 1210367 1.60 1230014 115 20048 1203577 1.64 1223625 116 20272 1201610 1.66 1221882 117 20687 1202838 1.69 1223525 118 20962 1198005 1.72 1218967 119 21552 1193616 1.77 1215168 120 22045 1193532 1.81 1215577 121 22191 1185509 1.84 1207700 122 22762 1179038 1.89 1201800 123 23206 1181192 1.93 1204398 124 23582 1174739 1.97 1198321 125 23933 1171309 2.00 1195242 126 24696 1170847 2.07 1195543 127 24972 1163479 2.10 1188451 128 25391 1154790 2.15 1180181 129 25554 1155054 2.16 1180608 130 26379 1149361 2.24 1175740 131 26682 1140744 2.29 1167426 132 27326 1139561 2.34 1166887 133 27726 1133956 2.39 1161682 134 28261 1128944 2.44 1157205 135 28706 1124385 2.49 1153091 136 29260 1117134 2.55 1146394 137 29527 1109635 2.59 1139162 138 30278 1107641 2.66 1137919 139 30613 1100478 2.71 1131091 140 30633 1094223 2.72 1124856 141 31383 1091501 2.79 1122884 142 31961 1082252 2.87 1114213 143 32404 1076425 2.92 1108829 144 33253 1075364 3.00 1108617 145 34332 1071905 3.10 1106237 146 35769 1067034 3.24 1102803 147 36683 1063466 3.33 1100149 148 37524 1052194 3.44 1089718 149 49333 1054230 4.47 1103563 150 45599 989957 4.40 1035556 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 40411 5143309 0.78 5183720 2 64714 4369892 1.46 4434606 3 29602 3860303 0.76 3889905 4 27192 4938556 0.55 4965748 5 28838 5165224 0.56 5194062 6 27390 5121991 0.53 5149381 7 26606 4540824 0.58 4567430 8 23691 4730695 0.50 4754386 9 23359 4851730 0.48 4875089 10 22318 4886457 0.45 4908775 11 22115 5109588 0.43 5131703 12 21337 5098918 0.42 5120255 13 21290 5092856 0.42 5114146 14 21989 5118943 0.43 5140932 15 23921 5108046 0.47 5131967 16 26855 5063209 0.53 5090064 17 31008 5070358 0.61 5101366 18 35714 5114115 0.69 5149829 19 40790 5111734 0.79 5152524 20 46182 5120453 0.89 5166635 21 51902 5137496 1.00 5189398 22 57288 5089787 1.11 5147075 23 61572 5072267 1.20 5133839 24 66238 5107478 1.28 5173716 25 69444 5106680 1.34 5176124 26 72759 5116254 1.40 5189013 27 74479 5139285 1.43 5213764 28 75185 5127038 1.45 5202223 29 75651 5138045 1.45 5213696 30 75509 5168885 1.44 5244394 31 70169 5141759 1.35 5211928 32 66685 5128474 1.28 5195159 33 62892 5146708 1.21 5209600 34 59318 5110809 1.15 5170127 35 55391 5110063 1.07 5165454 36 52806 5130238 1.02 5183044 37 51307 5111888 0.99 5163195 38 50433 5106222 0.98 5156655 39 51074 5128817 0.99 5179891 40 50600 5110211 0.98 5160811 41 49687 5098995 0.97 5148682 42 49457 5111727 0.96 5161184 43 49039 5084500 0.96 5133539 44 49008 5070321 0.96 5119329 45 49138 5077924 0.96 5127062 46 48853 5066944 0.95 5115797 47 48861 5065244 0.96 5114105 48 49490 5077909 0.97 5127399 49 49620 5050419 0.97 5100039 50 50290 5043356 0.99 5093646 51 50290 5062000 0.98 5112290 52 49847 5039678 0.98 5089525 53 50271 5033323 0.99 5083594 54 50631 5044023 0.99 5094654 55 49881 5022390 0.98 5072271 56 50757 5033252 1.00 5084009 57 50813 5044541 1.00 5095354 58 50832 5027213 1.00 5078045 59 50872 5009294 1.01 5060166 60 51516 5024967 1.01 5076483 61 51133 4994589 1.01 5045722 62 51310 4995064 1.02 5046374 63 51919 5001116 1.03 5053035 64 51736 4976020 1.03 5027756 65 51690 4960210 1.03 5011900 66 52100 4976588 1.04 5028688 67 51906 4957179 1.04 5009085 68 52945 4959710 1.06 5012655 69 52977 4973401 1.05 5026378 70 52701 4961111 1.05 5013812 71 53022 4949331 1.06 5002353 72 53788 4958857 1.07 5012645 73 53857 4937729 1.08 4991586 74 54513 4939056 1.09 4993569 75 54573 4939287 1.09 4993860 76 54407 4917189 1.09 4971596 77 54549 4910031 1.10 4964580 78 55965 4921840 1.12 4977805 79 55315 4896768 1.12 4952083 80 55261 4884146 1.12 4939407 81 56367 4894325 1.14 4950692 82 56173 4875526 1.14 4931699 83 56506 4867297 1.15 4923803 84 57196 4878815 1.16 4936011 85 56566 4845595 1.15 4902161 86 57610 4845420 1.17 4903030 87 58322 4849334 1.19 4907656 88 58713 4838269 1.20 4896982 89 59071 4836533 1.21 4895604 90 59855 4840762 1.22 4900617 91 59879 4813243 1.23 4873122 92 60541 4801565 1.25 4862106 93 61519 4809165 1.26 4870684 94 61620 4788814 1.27 4850434 95 62120 4777618 1.28 4839738 96 62888 4782750 1.30 4845638 97 63985 4762605 1.33 4826590 98 64133 4758157 1.33 4822290 99 65622 4764230 1.36 4829852 100 66119 4742681 1.37 4808800 101 67333 4743294 1.40 4810627 102 67982 4742334 1.41 4810316 103 69087 4714997 1.44 4784084 104 69954 4705752 1.46 4775706 105 71495 4714646 1.49 4786141 106 72067 4689811 1.51 4761878 107 73333 4678443 1.54 4751776 108 74728 4676245 1.57 4750973 109 75568 4659977 1.60 4735545 110 76495 4655733 1.62 4732228 111 78048 4650294 1.65 4728342 112 79155 4625913 1.68 4705068 113 80511 4612517 1.72 4693028 114 82196 4606943 1.75 4689139 115 83308 4587287 1.78 4670595 116 85511 4573957 1.84 4659468 117 87373 4577835 1.87 4665208 118 88348 4552153 1.90 4640501 119 89988 4541178 1.94 4631166 120 92011 4533228 1.99 4625239 121 93779 4511317 2.04 4605096 122 95493 4502014 2.08 4597507 123 97243 4507125 2.11 4604368 124 99525 4480673 2.17 4580198 125 101532 4461040 2.23 4562572 126 102945 4452934 2.26 4555879 127 104753 4422256 2.31 4527009 128 106975 4407413 2.37 4514388 129 108841 4394559 2.42 4503400 130 110865 4375502 2.47 4486367 131 112863 4363295 2.52 4476158 132 114724 4355744 2.57 4470468 133 116662 4329584 2.62 4446246 134 119107 4307197 2.69 4426304 135 121291 4292230 2.75 4413521 136 123306 4261916 2.81 4385222 137 124289 4241448 2.85 4365737 138 126809 4228173 2.91 4354982 139 128180 4202854 2.96 4331034 140 129770 4191443 3.00 4321213 141 131946 4174394 3.06 4306340 142 134889 4144689 3.15 4279578 143 137321 4124618 3.22 4261939 144 140518 4129396 3.29 4269914 145 143336 4103504 3.38 4246840 146 148417 4092143 3.50 4240560 147 156721 4078309 3.70 4235030 148 156817 4038318 3.74 4195135 149 152453 3980359 3.69 4132812 150 148944 3787177 3.78 3936121 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1494074 231441 86.59 1725515 2 506823 115642 81.42 622465 3 380092 176799 68.25 556891 4 443009 298725 59.73 741734 5 299499 338183 46.97 637682 6 228743 370320 38.18 599063 7 179088 453771 28.30 632859 8 156809 521369 23.12 678178 9 135145 575782 19.01 710927 10 116892 613872 16.00 730764 11 100884 647888 13.47 748772 12 91045 655547 12.19 746592 13 83082 654548 11.26 737630 14 78512 655200 10.70 733712 15 73519 652226 10.13 725745 16 70634 647325 9.84 717959 17 70843 644203 9.91 715046 18 69327 637968 9.80 707295 19 68481 632559 9.77 701040 20 68794 630262 9.84 699056 21 68231 626966 9.81 695197 22 67241 623979 9.73 691220 23 67294 621244 9.77 688538 24 66552 616683 9.74 683235 25 65782 612674 9.70 678456 26 65181 610688 9.64 675869 27 64854 607431 9.65 672285 28 64049 601372 9.63 665421 29 64059 599157 9.66 663216 30 62410 593592 9.51 656002 31 62751 590594 9.60 653345 32 61585 585287 9.52 646872 33 61057 579563 9.53 640620 34 60304 575416 9.49 635720 35 59669 569043 9.49 628712 36 58916 564868 9.44 623784 37 58422 560206 9.44 618628 38 57465 553844 9.40 611309 39 56867 548031 9.40 604898 40 55898 543313 9.33 599211 41 55546 536090 9.39 591636 42 54646 530020 9.35 584666 43 54123 523150 9.38 577273 44 53186 517163 9.33 570349 45 53180 510767 9.43 563947 46 52557 505843 9.41 558400 47 51739 501051 9.36 552790 48 51042 493846 9.37 544888 49 49946 487718 9.29 537664 50 49306 481870 9.28 531176 51 49070 476368 9.34 525438 52 47791 471079 9.21 518870 53 47409 463090 9.29 510499 54 46696 458334 9.25 505030 55 46018 451386 9.25 497404 56 45259 445737 9.22 490996 57 44640 439003 9.23 483643 58 44117 434902 9.21 479019 59 43420 427264 9.22 470684 60 42977 421234 9.26 464211 61 42256 414858 9.24 457114 62 41379 408230 9.20 449609 63 40724 403123 9.18 443847 64 40414 397998 9.22 438412 65 39479 389336 9.21 428815 66 39005 384190 9.22 423195 67 37960 379046 9.10 417006 68 37312 372684 9.10 409996 69 36713 366999 9.09 403712 70 36504 361770 9.17 398274 71 36044 356195 9.19 392239 72 34984 348740 9.12 383724 73 34580 344435 9.12 379015 74 34229 338602 9.18 372831 75 33211 332578 9.08 365789 76 32730 326957 9.10 359687 77 32228 321441 9.11 353669 78 31727 315330 9.14 347057 79 31081 309830 9.12 340911 80 30496 303777 9.12 334273 81 30218 299357 9.17 329575 82 29313 294641 9.05 323954 83 28597 288949 9.01 317546 84 28364 283716 9.09 312080 85 27889 277362 9.14 305251 86 27337 272770 9.11 300107 87 26716 267690 9.07 294406 88 26512 262933 9.16 289445 89 25709 257952 9.06 283661 90 25223 253773 9.04 278996 91 24586 248751 8.99 273337 92 24323 243509 9.08 267832 93 23939 238645 9.12 262584 94 23105 233319 9.01 256424 95 22914 228871 9.10 251785 96 22396 225757 9.03 248153 97 22168 220316 9.14 242484 98 21479 216340 9.03 237819 99 21105 212026 9.05 233131 100 20884 207205 9.16 228089 101 20168 203655 9.01 223823 102 19665 199334 8.98 218999 103 19209 195009 8.97 214218 104 18828 190968 8.97 209796 105 18565 187688 9.00 206253 106 18018 183089 8.96 201107 107 17553 179162 8.92 196715 108 17220 175383 8.94 192603 109 16892 171501 8.97 188393 110 16339 167858 8.87 184197 111 16198 164797 8.95 180995 112 15672 161600 8.84 177272 113 15476 156572 9.00 172048 114 15276 154383 9.00 169659 115 14618 150930 8.83 165548 116 14287 147239 8.85 161526 117 14016 143924 8.87 157940 118 13850 141618 8.91 155468 119 13525 138042 8.92 151567 120 13191 134960 8.90 148151 121 12876 131964 8.89 144840 122 12567 128728 8.89 141295 123 12327 125820 8.92 138147 124 11897 123774 8.77 135671 125 11721 120459 8.87 132180 126 11448 117623 8.87 129071 127 11217 115669 8.84 126886 128 10828 113081 8.74 123909 129 10731 110418 8.86 121149 130 10389 107720 8.80 118109 131 10230 105573 8.83 115803 132 9975 102997 8.83 112972 133 9768 100297 8.87 110065 134 9551 98066 8.87 107617 135 9164 95615 8.75 104779 136 9033 93460 8.81 102493 137 8605 91321 8.61 99926 138 8459 89310 8.65 97769 139 8181 87873 8.52 96054 140 8224 84549 8.86 92773 141 8100 82990 8.89 91090 142 7679 81032 8.66 88711 143 7498 79068 8.66 86566 144 7440 77950 8.71 85390 145 6999 75800 8.45 82799 146 7076 73432 8.79 80508 147 6822 71621 8.70 78443 148 6698 69363 8.81 76061 149 6324 63507 9.06 69831 150 5687 0 100.00 5687 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1739905 271072 86.52 2010977 2 1541390 385099 80.01 1926489 3 458336 210208 68.56 668544 4 452404 318515 58.68 770919 5 383050 479627 44.40 862677 6 253942 467166 35.22 721108 7 190307 516294 26.93 706601 8 133092 626064 17.53 759156 9 97515 722986 11.88 820501 10 67660 802669 7.77 870329 11 47085 869373 5.14 916458 12 31387 898920 3.37 930307 13 21256 905802 2.29 927058 14 14811 908915 1.60 923726 15 10618 910994 1.15 921612 16 8078 914197 0.88 922275 17 7508 911808 0.82 919316 18 5982 905767 0.66 911749 19 5967 894563 0.66 900530 20 5503 885915 0.62 891418 21 5187 879959 0.59 885146 22 5425 877602 0.61 883027 23 4740 872287 0.54 877027 24 4281 870158 0.49 874439 25 4304 861953 0.50 866257 26 4222 859647 0.49 863869 27 4007 853917 0.47 857924 28 4242 850528 0.50 854770 29 3755 842197 0.44 845952 30 3638 838400 0.43 842038 31 3586 832844 0.43 836430 32 3420 822736 0.41 826156 33 3279 816916 0.40 820195 34 3378 811000 0.41 814378 35 3330 804649 0.41 807979 36 3377 795478 0.42 798855 37 3211 789114 0.41 792325 38 3160 781985 0.40 785145 39 3170 773897 0.41 777067 40 3037 764477 0.40 767514 41 3057 758368 0.40 761425 42 2946 749351 0.39 752297 43 2954 739371 0.40 742325 44 2905 731735 0.40 734640 45 2902 721758 0.40 724660 46 2794 714019 0.39 716813 47 2948 703409 0.42 706357 48 2842 696336 0.41 699178 49 2818 687279 0.41 690097 50 2755 678714 0.40 681469 51 2689 669763 0.40 672452 52 2734 660475 0.41 663209 53 2677 652329 0.41 655006 54 2585 642859 0.40 645444 55 2658 633713 0.42 636371 56 2591 625972 0.41 628563 57 2458 617155 0.40 619613 58 2495 608718 0.41 611213 59 2503 601014 0.41 603517 60 2362 590772 0.40 593134 61 2389 581943 0.41 584332 62 2370 573926 0.41 576296 63 2337 565061 0.41 567398 64 2222 556475 0.40 558697 65 2238 548166 0.41 550404 66 2144 540047 0.40 542191 67 2189 532361 0.41 534550 68 2086 523366 0.40 525452 69 2104 515527 0.41 517631 70 2019 506718 0.40 508737 71 2076 498686 0.41 500762 72 1951 490099 0.40 492050 73 1970 481521 0.41 483491 74 1938 474497 0.41 476435 75 1885 465879 0.40 467764 76 1841 459030 0.40 460871 77 1791 450664 0.40 452455 78 1838 442066 0.41 443904 79 1738 435435 0.40 437173 80 1754 427675 0.41 429429 81 1674 419266 0.40 420940 82 1647 412861 0.40 414508 83 1649 404653 0.41 406302 84 1602 397110 0.40 398712 85 1539 389591 0.39 391130 86 1553 381732 0.41 383285 87 1566 373267 0.42 374833 88 1473 367894 0.40 369367 89 1458 361419 0.40 362877 90 1395 354244 0.39 355639 91 1368 348181 0.39 349549 92 1340 341920 0.39 343260 93 1421 333968 0.42 335389 94 1328 327167 0.40 328495 95 1301 321161 0.40 322462 96 1262 314948 0.40 316210 97 1281 308876 0.41 310157 98 1166 301533 0.39 302699 99 1204 296562 0.40 297766 100 1155 291057 0.40 292212 101 1179 284813 0.41 285992 102 1128 279299 0.40 280427 103 1100 273476 0.40 274576 104 1103 267573 0.41 268676 105 1117 262221 0.42 263338 106 1012 256542 0.39 257554 107 1069 250510 0.42 251579 108 1005 244717 0.41 245722 109 982 241368 0.41 242350 110 1005 235910 0.42 236915 111 934 230699 0.40 231633 112 916 225835 0.40 226751 113 954 220340 0.43 221294 114 915 216020 0.42 216935 115 893 211322 0.42 212215 116 817 206123 0.39 206940 117 763 202228 0.38 202991 118 815 197743 0.41 198558 119 803 194012 0.41 194815 120 758 189244 0.40 190002 121 750 184187 0.41 184937 122 731 180972 0.40 181703 123 721 176519 0.41 177240 124 724 172317 0.42 173041 125 690 168549 0.41 169239 126 659 164841 0.40 165500 127 637 161215 0.39 161852 128 625 157159 0.40 157784 129 620 154461 0.40 155081 130 629 150830 0.42 151459 131 639 147150 0.43 147789 132 572 144246 0.39 144818 133 561 140469 0.40 141030 134 516 137053 0.38 137569 135 569 133538 0.42 134107 136 549 130260 0.42 130809 137 511 126925 0.40 127436 138 502 124256 0.40 124758 139 502 121727 0.41 122229 140 452 119307 0.38 119759 141 492 116601 0.42 117093 142 481 113254 0.42 113735 143 415 110117 0.38 110532 144 400 108078 0.37 108478 145 435 104928 0.41 105363 146 412 102908 0.40 103320 147 439 100349 0.44 100788 148 395 97469 0.40 97864 149 335 90597 0.37 90932 150 266 0 100.00 266 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4955465 768518 86.57 5723983 2 4112306 1016070 80.19 5128376 3 3537726 1840693 65.78 5378419 4 3016218 2249044 57.29 5265262 5 2020933 2597656 43.76 4618589 6 1509004 2784556 35.15 4293560 7 1096145 2880557 27.56 3976702 8 793126 2935086 21.27 3728212 9 556284 3043502 15.45 3599786 10 381845 3160164 10.78 3542009 11 250427 3359955 6.94 3610382 12 163490 3453988 4.52 3617478 13 108431 3503203 3.00 3611634 14 70611 3526391 1.96 3597002 15 48875 3547643 1.36 3596518 16 36237 3561489 1.01 3597726 17 29382 3565720 0.82 3595102 18 25300 3558487 0.71 3583787 19 23007 3544574 0.64 3567581 20 22125 3510164 0.63 3532289 21 21058 3483070 0.60 3504128 22 20710 3447693 0.60 3468403 23 20395 3419955 0.59 3440350 24 19188 3384176 0.56 3403364 25 18381 3352235 0.55 3370616 26 17438 3317877 0.52 3335315 27 16588 3285545 0.50 3302133 28 16093 3255228 0.49 3271321 29 15530 3225605 0.48 3241135 30 14669 3192059 0.46 3206728 31 14108 3164753 0.44 3178861 32 13639 3135468 0.43 3149107 33 13067 3100468 0.42 3113535 34 12802 3071768 0.42 3084570 35 12437 3037217 0.41 3049654 36 12326 3007499 0.41 3019825 37 12094 2976231 0.40 2988325 38 11851 2945486 0.40 2957337 39 11620 2912853 0.40 2924473 40 11373 2884437 0.39 2895810 41 11359 2853117 0.40 2864476 42 11271 2817424 0.40 2828695 43 11009 2787486 0.39 2798495 44 10947 2751338 0.40 2762285 45 10882 2714919 0.40 2725801 46 10561 2682506 0.39 2693067 47 10573 2649324 0.40 2659897 48 10355 2616904 0.39 2627259 49 10314 2584224 0.40 2594538 50 10106 2554746 0.39 2564852 51 9923 2520493 0.39 2530416 52 9874 2484457 0.40 2494331 53 9999 2451072 0.41 2461071 54 9428 2417724 0.39 2427152 55 9468 2384024 0.40 2393492 56 9389 2351913 0.40 2361302 57 9249 2315017 0.40 2324266 58 8904 2281425 0.39 2290329 59 8773 2249682 0.39 2258455 60 8976 2216175 0.40 2225151 61 8499 2182683 0.39 2191182 62 8628 2153404 0.40 2162032 63 8381 2118797 0.39 2127178 64 8308 2086448 0.40 2094756 65 8024 2055529 0.39 2063553 66 8006 2022223 0.39 2030229 67 7955 1992893 0.40 2000848 68 7745 1959222 0.39 1966967 69 7666 1928133 0.40 1935799 70 7534 1899137 0.40 1906671 71 7538 1868080 0.40 1875618 72 7371 1836682 0.40 1844053 73 7300 1803707 0.40 1811007 74 6958 1774810 0.39 1781768 75 6834 1740541 0.39 1747375 76 6739 1710348 0.39 1717087 77 6723 1684922 0.40 1691645 78 6405 1655696 0.39 1662101 79 6549 1624811 0.40 1631360 80 6223 1597972 0.39 1604195 81 6123 1567928 0.39 1574051 82 6076 1540812 0.39 1546888 83 5912 1512568 0.39 1518480 84 5887 1484962 0.39 1490849 85 5647 1460186 0.39 1465833 86 5637 1429894 0.39 1435531 87 5590 1405086 0.40 1410676 88 5561 1375653 0.40 1381214 89 5424 1350348 0.40 1355772 90 5198 1325085 0.39 1330283 91 5084 1299866 0.39 1304950 92 4992 1277154 0.39 1282146 93 4896 1250913 0.39 1255809 94 4848 1224303 0.39 1229151 95 4674 1203426 0.39 1208100 96 4628 1176663 0.39 1181291 97 4513 1152334 0.39 1156847 98 4444 1130170 0.39 1134614 99 4367 1106814 0.39 1111181 100 4338 1085870 0.40 1090208 101 4168 1061897 0.39 1066065 102 4194 1041229 0.40 1045423 103 3980 1020412 0.39 1024392 104 3971 996713 0.40 1000684 105 3850 978160 0.39 982010 106 3774 955802 0.39 959576 107 3684 936192 0.39 939876 108 3572 915841 0.39 919413 109 3520 896584 0.39 900104 110 3516 876423 0.40 879939 111 3354 859998 0.39 863352 112 3324 840636 0.39 843960 113 3221 822083 0.39 825304 114 3217 805136 0.40 808353 115 3135 786412 0.40 789547 116 2990 770005 0.39 772995 117 2988 752595 0.40 755583 118 2906 734878 0.39 737784 119 2912 718013 0.40 720925 120 2785 702278 0.40 705063 121 2704 687644 0.39 690348 122 2660 672073 0.39 674733 123 2603 656414 0.39 659017 124 2544 640767 0.40 643311 125 2511 627698 0.40 630209 126 2353 614408 0.38 616761 127 2434 599819 0.40 602253 128 2355 586340 0.40 588695 129 2288 572791 0.40 575079 130 2249 558941 0.40 561190 131 2148 545947 0.39 548095 132 2035 533455 0.38 535490 133 2044 520710 0.39 522754 134 2047 509319 0.40 511366 135 1979 496784 0.40 498763 136 1907 484260 0.39 486167 137 1943 473214 0.41 475157 138 1775 463105 0.38 464880 139 1867 451401 0.41 453268 140 1703 440098 0.39 441801 141 1752 429057 0.41 430809 142 1704 419884 0.40 421588 143 1640 409766 0.40 411406 144 1591 400245 0.40 401836 145 1602 391888 0.41 393490 146 1508 381692 0.39 383200 147 1489 371817 0.40 373306 148 1420 361762 0.39 363182 149 1238 335359 0.37 336597 150 919 0 100.00 919