SRR18245597.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 44023102 lines in total Total number of methylation call strings processed: 88046204 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1436964727 Total methylated C's in CpG context: 22580529 Total methylated C's in CHG context: 7742585 Total methylated C's in CHH context: 32395707 Total C to T conversions in CpG context: 183503632 Total C to T conversions in CHG context: 255944765 Total C to T conversions in CHH context: 934797509 C methylated in CpG context: 11.0% C methylated in non-CpG context: 3.3%