CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 48570 921680 5.01 970250 2 128842 1120975 10.31 1249817 3 98193 714322 12.09 812515 4 89494 1002445 8.20 1091939 5 104397 964760 9.76 1069157 6 123139 1201694 9.29 1324833 7 112474 972274 10.37 1084748 8 104459 951841 9.89 1056300 9 98334 926819 9.59 1025153 10 94291 892103 9.56 986394 11 91450 918730 9.05 1010180 12 89391 866072 9.36 955463 13 89747 874349 9.31 964096 14 92184 900776 9.28 992960 15 91699 913752 9.12 1005451 16 92816 929433 9.08 1022249 17 93916 939926 9.08 1033842 18 96918 959832 9.17 1056750 19 96573 949261 9.23 1045834 20 96883 956421 9.20 1053304 21 96863 958323 9.18 1055186 22 96707 950457 9.24 1047164 23 96777 943071 9.31 1039848 24 97988 952694 9.33 1050682 25 95721 941114 9.23 1036835 26 96409 936349 9.34 1032758 27 96698 942963 9.30 1039661 28 97487 943699 9.36 1041186 29 96052 941339 9.26 1037391 30 97860 948986 9.35 1046846 31 96870 939037 9.35 1035907 32 97115 937101 9.39 1034216 33 97533 944998 9.36 1042531 34 96698 937210 9.35 1033908 35 96640 938567 9.34 1035207 36 96913 943696 9.31 1040609 37 95492 934556 9.27 1030048 38 96511 935612 9.35 1032123 39 97077 943909 9.33 1040986 40 96593 937151 9.34 1033744 41 96354 936713 9.33 1033067 42 97482 948825 9.32 1046307 43 96180 933983 9.34 1030163 44 96413 934449 9.35 1030862 45 96282 934318 9.34 1030600 46 95929 930555 9.35 1026484 47 96006 929322 9.36 1025328 48 96630 938407 9.34 1035037 49 96107 931966 9.35 1028073 50 96074 931651 9.35 1027725 51 97057 935716 9.40 1032773 52 95588 930970 9.31 1026558 53 95373 925832 9.34 1021205 54 95976 932027 9.34 1028003 55 95487 924081 9.37 1019568 56 95232 924148 9.34 1019380 57 95799 926176 9.37 1021975 58 94803 920761 9.34 1015564 59 94874 919900 9.35 1014774 60 95432 925338 9.35 1020770 61 94614 917682 9.35 1012296 62 95078 920466 9.36 1015544 63 95714 924067 9.39 1019781 64 94671 919272 9.34 1013943 65 94334 914194 9.35 1008528 66 94453 917659 9.33 1012112 67 93655 908600 9.34 1002255 68 94561 913643 9.38 1008204 69 95537 913202 9.47 1008739 70 93845 907742 9.37 1001587 71 94640 908866 9.43 1003506 72 95042 915083 9.41 1010125 73 93991 906139 9.40 1000130 74 94403 908272 9.42 1002675 75 94384 910751 9.39 1005135 76 93900 904177 9.41 998077 77 94386 905346 9.44 999732 78 95090 904863 9.51 999953 79 93739 898635 9.45 992374 80 93737 897247 9.46 990984 81 94255 901002 9.47 995257 82 92656 895496 9.38 988152 83 93781 894700 9.49 988481 84 94365 898733 9.50 993098 85 93756 895657 9.48 989413 86 93903 893776 9.51 987679 87 93173 893422 9.44 986595 88 92829 887509 9.47 980338 89 93041 882703 9.54 975744 90 92629 887555 9.45 980184 91 92442 882802 9.48 975244 92 92217 880547 9.48 972764 93 93137 884827 9.52 977964 94 92431 878943 9.52 971374 95 92415 878140 9.52 970555 96 93492 882778 9.58 976270 97 93145 876006 9.61 969151 98 92952 877100 9.58 970052 99 92807 875590 9.58 968397 100 92214 868830 9.60 961044 101 91744 865276 9.59 957020 102 92078 867123 9.60 959201 103 91752 860129 9.64 951881 104 92704 861448 9.72 954152 105 91742 862475 9.61 954217 106 91221 855776 9.63 946997 107 91921 855315 9.70 947236 108 92114 854891 9.73 947005 109 91388 847996 9.73 939384 110 92028 848585 9.78 940613 111 91863 849317 9.76 941180 112 91698 844698 9.79 936396 113 92368 842965 9.88 935333 114 92033 842366 9.85 934399 115 91318 835706 9.85 927024 116 91758 834824 9.90 926582 117 91388 835930 9.86 927318 118 91226 829341 9.91 920567 119 91386 826762 9.95 918148 120 91912 828304 9.99 920216 121 90820 822142 9.95 912962 122 90282 816941 9.95 907223 123 91031 818807 10.01 909838 124 90760 814000 10.03 904760 125 90743 810949 10.06 901692 126 91385 810333 10.13 901718 127 90718 803266 10.15 893984 128 90986 803275 10.17 894261 129 90106 799443 10.13 889549 130 90990 794102 10.28 885092 131 90103 792268 10.21 882371 132 90585 792211 10.26 882796 133 90449 786408 10.32 876857 134 90259 783547 10.33 873806 135 90662 782379 10.38 873041 136 90579 777091 10.44 867670 137 90567 772916 10.49 863483 138 90526 771206 10.51 861732 139 90049 764020 10.54 854069 140 89835 760894 10.56 850729 141 89706 759734 10.56 849440 142 89017 751832 10.59 840849 143 89525 749256 10.67 838781 144 89824 749084 10.71 838908 145 89227 741061 10.75 830288 146 89153 739414 10.76 828567 147 90848 739204 10.94 830052 148 88701 731603 10.81 820304 149 89160 725442 10.95 814602 150 95264 696798 12.03 792062 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 23707 1816597 1.29 1840304 2 17128 1301134 1.30 1318262 3 8918 1097107 0.81 1106025 4 7352 1356693 0.54 1364045 5 9962 1615588 0.61 1625550 6 9227 1482265 0.62 1491492 7 7659 1264940 0.60 1272599 8 6759 1265885 0.53 1272644 9 6429 1241076 0.52 1247505 10 6403 1241177 0.51 1247580 11 6460 1272680 0.51 1279140 12 5844 1280228 0.45 1286072 13 5561 1275168 0.43 1280729 14 5518 1279657 0.43 1285175 15 5602 1302748 0.43 1308350 16 5620 1316236 0.43 1321856 17 5687 1335786 0.42 1341473 18 5740 1332839 0.43 1338579 19 5907 1330266 0.44 1336173 20 6291 1339821 0.47 1346112 21 6704 1344760 0.50 1351464 22 7185 1333535 0.54 1340720 23 7489 1327756 0.56 1335245 24 7939 1322370 0.60 1330309 25 8258 1315905 0.62 1324163 26 8794 1317156 0.66 1325950 27 9250 1330711 0.69 1339961 28 9422 1320519 0.71 1329941 29 10596 1320996 0.80 1331592 30 11338 1331382 0.84 1342720 31 10846 1330561 0.81 1341407 32 10937 1329862 0.82 1340799 33 10696 1330242 0.80 1340938 34 10588 1322559 0.79 1333147 35 10438 1318749 0.79 1329187 36 10165 1328280 0.76 1338445 37 9945 1321581 0.75 1331526 38 10354 1329750 0.77 1340104 39 10700 1331086 0.80 1341786 40 10458 1327457 0.78 1337915 41 10790 1324885 0.81 1335675 42 10661 1327698 0.80 1338359 43 10752 1318066 0.81 1328818 44 11082 1316147 0.83 1327229 45 10943 1316465 0.82 1327408 46 10952 1310211 0.83 1321163 47 10960 1308095 0.83 1319055 48 11372 1316733 0.86 1328105 49 11442 1314687 0.86 1326129 50 11559 1307822 0.88 1319381 51 11632 1311925 0.88 1323557 52 11720 1309100 0.89 1320820 53 11525 1310189 0.87 1321714 54 12121 1312903 0.91 1325024 55 11921 1303237 0.91 1315158 56 11877 1301732 0.90 1313609 57 12011 1301170 0.91 1313181 58 11946 1301102 0.91 1313048 59 12482 1296978 0.95 1309460 60 12614 1307362 0.96 1319976 61 12569 1303343 0.96 1315912 62 12753 1302478 0.97 1315231 63 12957 1305652 0.98 1318609 64 12774 1292882 0.98 1305656 65 12817 1286320 0.99 1299137 66 12648 1287481 0.97 1300129 67 12861 1281535 0.99 1294396 68 12984 1286295 1.00 1299279 69 13194 1289484 1.01 1302678 70 13341 1283545 1.03 1296886 71 13300 1278764 1.03 1292064 72 13309 1280333 1.03 1293642 73 13356 1275710 1.04 1289066 74 13553 1274223 1.05 1287776 75 13568 1281015 1.05 1294583 76 13741 1274577 1.07 1288318 77 13749 1266751 1.07 1280500 78 14006 1273167 1.09 1287173 79 13805 1266924 1.08 1280729 80 14122 1264558 1.10 1278680 81 14098 1266715 1.10 1280813 82 14212 1260621 1.11 1274833 83 14513 1258978 1.14 1273491 84 14677 1266987 1.15 1281664 85 14738 1259063 1.16 1273801 86 14744 1252017 1.16 1266761 87 14886 1249526 1.18 1264412 88 14858 1247134 1.18 1261992 89 15251 1246117 1.21 1261368 90 15442 1249713 1.22 1265155 91 15274 1236903 1.22 1252177 92 15423 1236163 1.23 1251586 93 15710 1243907 1.25 1259617 94 15945 1239876 1.27 1255821 95 15881 1233592 1.27 1249473 96 16272 1235637 1.30 1251909 97 16101 1225155 1.30 1241256 98 16409 1222259 1.32 1238668 99 16773 1227457 1.35 1244230 100 16723 1216436 1.36 1233159 101 16885 1213322 1.37 1230207 102 17031 1214428 1.38 1231459 103 17272 1207376 1.41 1224648 104 17413 1205012 1.42 1222425 105 17842 1207770 1.46 1225612 106 17910 1201558 1.47 1219468 107 18072 1195637 1.49 1213709 108 18211 1198307 1.50 1216518 109 18678 1192596 1.54 1211274 110 19039 1189793 1.57 1208832 111 19426 1189459 1.61 1208885 112 19509 1185744 1.62 1205253 113 19900 1177594 1.66 1197494 114 19954 1177717 1.67 1197671 115 20088 1167924 1.69 1188012 116 20307 1167238 1.71 1187545 117 20915 1166607 1.76 1187522 118 21353 1162112 1.80 1183465 119 21637 1158222 1.83 1179859 120 21898 1158414 1.86 1180312 121 22298 1149719 1.90 1172017 122 22673 1143561 1.94 1166234 123 23166 1144645 1.98 1167811 124 23371 1140048 2.01 1163419 125 23961 1134494 2.07 1158455 126 24271 1132450 2.10 1156721 127 24097 1125798 2.10 1149895 128 24730 1120727 2.16 1145457 129 25650 1117171 2.24 1142821 130 25265 1111942 2.22 1137207 131 25967 1105870 2.29 1131837 132 26233 1104575 2.32 1130808 133 26376 1095258 2.35 1121634 134 26918 1092680 2.40 1119598 135 27266 1087922 2.44 1115188 136 27545 1078823 2.49 1106368 137 28081 1075566 2.54 1103647 138 28533 1071727 2.59 1100260 139 28651 1063348 2.62 1091999 140 28888 1059276 2.65 1088164 141 29276 1056477 2.70 1085753 142 29383 1048292 2.73 1077675 143 30336 1040251 2.83 1070587 144 31092 1040501 2.90 1071593 145 31363 1034480 2.94 1065843 146 32876 1031107 3.09 1063983 147 33639 1027971 3.17 1061610 148 33895 1017583 3.22 1051478 149 45198 1018942 4.25 1064140 150 41993 957732 4.20 999725 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 40228 4758635 0.84 4798863 2 70622 4315583 1.61 4386205 3 30653 3708284 0.82 3738937 4 27502 4693364 0.58 4720866 5 28786 4822825 0.59 4851611 6 26487 4786462 0.55 4812949 7 26309 4233239 0.62 4259548 8 23074 4443913 0.52 4466987 9 23273 4584981 0.51 4608254 10 21778 4616013 0.47 4637791 11 21721 4829149 0.45 4850870 12 21041 4817673 0.43 4838714 13 20057 4804962 0.42 4825019 14 21547 4835324 0.44 4856871 15 23298 4835592 0.48 4858890 16 25716 4782985 0.53 4808701 17 29565 4781844 0.61 4811409 18 33849 4819082 0.70 4852931 19 38175 4812637 0.79 4850812 20 43782 4832042 0.90 4875824 21 49209 4851625 1.00 4900834 22 53953 4803752 1.11 4857705 23 58483 4790767 1.21 4849250 24 63039 4827229 1.29 4890268 25 66636 4826776 1.36 4893412 26 69917 4837864 1.42 4907781 27 71610 4859705 1.45 4931315 28 72492 4845951 1.47 4918443 29 73174 4860292 1.48 4933466 30 73339 4895639 1.48 4968978 31 68579 4866926 1.39 4935505 32 64769 4852376 1.32 4917145 33 60432 4872964 1.22 4933396 34 57315 4832050 1.17 4889365 35 54648 4836621 1.12 4891269 36 51990 4859344 1.06 4911334 37 49850 4839987 1.02 4889837 38 49354 4835854 1.01 4885208 39 49613 4856255 1.01 4905868 40 48966 4837480 1.00 4886446 41 48270 4828113 0.99 4876383 42 48325 4843431 0.99 4891756 43 47811 4804301 0.99 4852112 44 48152 4797356 0.99 4845508 45 47788 4811469 0.98 4859257 46 47772 4789044 0.99 4836816 47 48045 4788699 0.99 4836744 48 48659 4810550 1.00 4859209 49 48671 4774869 1.01 4823540 50 49285 4769463 1.02 4818748 51 49380 4787162 1.02 4836542 52 49680 4768691 1.03 4818371 53 49572 4756596 1.03 4806168 54 50758 4768156 1.05 4818914 55 50382 4750004 1.05 4800386 56 50293 4757603 1.05 4807896 57 50824 4773056 1.05 4823880 58 50947 4750729 1.06 4801676 59 51343 4735165 1.07 4786508 60 52129 4751420 1.09 4803549 61 52106 4716952 1.09 4769058 62 52263 4715709 1.10 4767972 63 52308 4718448 1.10 4770756 64 52867 4690865 1.11 4743732 65 52817 4679648 1.12 4732465 66 52896 4702595 1.11 4755491 67 53079 4677991 1.12 4731070 68 53415 4680693 1.13 4734108 69 54612 4690169 1.15 4744781 70 54146 4676184 1.14 4730330 71 54684 4669400 1.16 4724084 72 55349 4678916 1.17 4734265 73 55117 4654623 1.17 4709740 74 55951 4653667 1.19 4709618 75 55829 4657691 1.18 4713520 76 56509 4631912 1.21 4688421 77 57204 4621902 1.22 4679106 78 57119 4637983 1.22 4695102 79 57673 4612311 1.23 4669984 80 57972 4597978 1.25 4655950 81 58597 4609105 1.26 4667702 82 58551 4583499 1.26 4642050 83 59046 4577975 1.27 4637021 84 59534 4587520 1.28 4647054 85 59856 4551537 1.30 4611393 86 60339 4550264 1.31 4610603 87 61489 4562631 1.33 4624120 88 61363 4548931 1.33 4610294 89 62232 4542704 1.35 4604936 90 62934 4548280 1.36 4611214 91 62574 4517964 1.37 4580538 92 63951 4506286 1.40 4570237 93 64556 4516223 1.41 4580779 94 65144 4485686 1.43 4550830 95 65409 4478123 1.44 4543532 96 66277 4487004 1.46 4553281 97 66703 4460845 1.47 4527548 98 67842 4455821 1.50 4523663 99 68656 4460937 1.52 4529593 100 69006 4442242 1.53 4511248 101 69763 4439369 1.55 4509132 102 70780 4440548 1.57 4511328 103 71532 4409951 1.60 4481483 104 72791 4405720 1.63 4478511 105 73511 4409723 1.64 4483234 106 74446 4386842 1.67 4461288 107 76042 4373872 1.71 4449914 108 76585 4372600 1.72 4449185 109 77584 4350978 1.75 4428562 110 77940 4341309 1.76 4419249 111 80262 4340482 1.82 4420744 112 80635 4321466 1.83 4402101 113 82107 4300418 1.87 4382525 114 83452 4294972 1.91 4378424 115 84656 4278550 1.94 4363206 116 86041 4263244 1.98 4349285 117 87655 4267636 2.01 4355291 118 88509 4242363 2.04 4330872 119 90045 4224996 2.09 4315041 120 92294 4221684 2.14 4313978 121 93834 4204293 2.18 4298127 122 94318 4195168 2.20 4289486 123 96516 4200101 2.25 4296617 124 97657 4172974 2.29 4270631 125 99072 4149131 2.33 4248203 126 100930 4143191 2.38 4244121 127 101273 4113833 2.40 4215106 128 104441 4095208 2.49 4199649 129 106396 4085330 2.54 4191726 130 107455 4066754 2.57 4174209 131 108099 4056792 2.60 4164891 132 110232 4047467 2.65 4157699 133 112051 4018308 2.71 4130359 134 113758 3999160 2.77 4112918 135 115250 3987814 2.81 4103064 136 116801 3960454 2.86 4077255 137 118382 3937709 2.92 4056091 138 119088 3929323 2.94 4048411 139 120866 3905368 3.00 4026234 140 122041 3890790 3.04 4012831 141 123055 3875152 3.08 3998207 142 125896 3849321 3.17 3975217 143 127242 3831168 3.21 3958410 144 130100 3833017 3.28 3963117 145 133002 3809442 3.37 3942444 146 136602 3801239 3.47 3937841 147 144651 3792767 3.67 3937418 148 144218 3752345 3.70 3896563 149 140235 3703018 3.65 3843253 150 136576 3524910 3.73 3661486 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1423265 217371 86.75 1640636 2 485863 108121 81.80 593984 3 366013 169145 68.39 535158 4 425219 283837 59.97 709056 5 286930 323942 46.97 610872 6 219646 355638 38.18 575284 7 169779 438167 27.93 607946 8 150295 501554 23.06 651849 9 127885 552880 18.79 680765 10 110494 589254 15.79 699748 11 94013 624764 13.08 718777 12 84723 631011 11.84 715734 13 77513 633362 10.90 710875 14 72574 635349 10.25 707923 15 68102 634653 9.69 702755 16 65750 632626 9.41 698376 17 65364 628817 9.42 694181 18 64146 623585 9.33 687731 19 64202 618421 9.41 682623 20 64045 617062 9.40 681107 21 63909 614969 9.41 678878 22 63397 612272 9.38 675669 23 62816 608861 9.35 671677 24 62064 605917 9.29 667981 25 61480 604875 9.23 666355 26 61240 600811 9.25 662051 27 60878 599888 9.21 660766 28 60300 597108 9.17 657408 29 59589 593768 9.12 653357 30 59061 589160 9.11 648221 31 59030 585241 9.16 644271 32 58379 582165 9.11 640544 33 57783 576850 9.10 634633 34 57357 573115 9.10 630472 35 56234 566819 9.03 623053 36 55914 563970 9.02 619884 37 55440 560506 9.00 615946 38 54972 555213 9.01 610185 39 54028 550913 8.93 604941 40 53810 545356 8.98 599166 41 52750 539676 8.90 592426 42 52551 534677 8.95 587228 43 51403 528041 8.87 579444 44 51482 523872 8.95 575354 45 50714 519450 8.89 570164 46 50343 511434 8.96 561777 47 50022 507252 8.98 557274 48 49265 503270 8.92 552535 49 48662 497525 8.91 546187 50 47889 491438 8.88 539327 51 47631 486758 8.91 534389 52 46784 481892 8.85 528676 53 46305 476288 8.86 522593 54 45312 470480 8.78 515792 55 44932 465193 8.81 510125 56 44400 458169 8.83 502569 57 43855 453269 8.82 497124 58 43442 448293 8.83 491735 59 43067 442287 8.87 485354 60 42033 436835 8.78 478868 61 41532 431483 8.78 473015 62 41020 423579 8.83 464599 63 40237 419414 8.75 459651 64 40116 413826 8.84 453942 65 39240 408473 8.76 447713 66 38682 402959 8.76 441641 67 38268 397409 8.78 435677 68 37429 391372 8.73 428801 69 37099 387058 8.75 424157 70 36546 380857 8.76 417403 71 36015 374183 8.78 410198 72 35840 369290 8.85 405130 73 34958 363945 8.76 398903 74 34500 358183 8.79 392683 75 33440 351605 8.68 385045 76 33096 346471 8.72 379567 77 32772 341347 8.76 374119 78 32387 335551 8.80 367938 79 31688 330118 8.76 361806 80 30951 325323 8.69 356274 81 30592 320508 8.71 351100 82 29973 314682 8.70 344655 83 29460 309844 8.68 339304 84 29030 302922 8.75 331952 85 28649 299900 8.72 328549 86 27885 293379 8.68 321264 87 27534 289545 8.68 317079 88 27477 283400 8.84 310877 89 26598 279039 8.70 305637 90 26398 274069 8.79 300467 91 25694 268689 8.73 294383 92 25098 264379 8.67 289477 93 24457 258327 8.65 282784 94 24171 254612 8.67 278783 95 23428 249661 8.58 273089 96 23024 245748 8.57 268772 97 22731 239739 8.66 262470 98 22394 235250 8.69 257644 99 22092 230665 8.74 252757 100 21142 226177 8.55 247319 101 21111 221677 8.70 242788 102 20635 217710 8.66 238345 103 19829 213565 8.50 233394 104 19726 208916 8.63 228642 105 19200 204718 8.57 223918 106 18719 200003 8.56 218722 107 18420 196448 8.57 214868 108 18037 192137 8.58 210174 109 17790 188800 8.61 206590 110 17304 184701 8.57 202005 111 16963 181014 8.57 197977 112 16339 176521 8.47 192860 113 15963 173519 8.42 189482 114 15965 169649 8.60 185614 115 15537 165266 8.59 180803 116 15063 162583 8.48 177646 117 14892 158787 8.57 173679 118 14574 155147 8.59 169721 119 14165 152019 8.52 166184 120 13851 148930 8.51 162781 121 13467 144673 8.52 158140 122 12925 141404 8.37 154329 123 12809 138258 8.48 151067 124 12597 134965 8.54 147562 125 12339 132001 8.55 144340 126 11974 129188 8.48 141162 127 11791 126646 8.52 138437 128 11375 123349 8.44 134724 129 11293 120433 8.57 131726 130 11054 117844 8.58 128898 131 10565 115606 8.37 126171 132 10504 112780 8.52 123284 133 10103 109234 8.47 119337 134 9719 107603 8.28 117322 135 9773 104697 8.54 114470 136 9269 101696 8.35 110965 137 9264 99112 8.55 108376 138 8876 96598 8.42 105474 139 8483 94580 8.23 103063 140 8289 92696 8.21 100985 141 8079 90326 8.21 98405 142 8019 87738 8.37 95757 143 7790 85683 8.33 93473 144 7614 83399 8.37 91013 145 7254 81574 8.17 88828 146 7157 79234 8.28 86391 147 7131 76839 8.49 83970 148 6787 75001 8.30 81788 149 6456 67639 8.71 74095 150 5935 0 100.00 5935 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1644565 250676 86.77 1895241 2 1457113 357336 80.31 1814449 3 431103 197014 68.63 628117 4 417877 292421 58.83 710298 5 342602 435250 44.04 777852 6 228155 428098 34.77 656253 7 171806 480608 26.33 652414 8 120136 580119 17.16 700255 9 87214 680128 11.37 767342 10 60837 757779 7.43 818616 11 41635 821725 4.82 863360 12 28165 851152 3.20 879317 13 19370 860479 2.20 879849 14 13791 867318 1.57 881109 15 9590 874494 1.08 884084 16 7482 877440 0.85 884922 17 6839 879704 0.77 886543 18 5751 871412 0.66 877163 19 5853 862136 0.67 867989 20 5339 853343 0.62 858682 21 5005 849869 0.59 854874 22 5236 848649 0.61 853885 23 4546 845355 0.53 849901 24 4078 840612 0.48 844690 25 4213 834131 0.50 838344 26 4126 832435 0.49 836561 27 3911 828425 0.47 832336 28 3985 826296 0.48 830281 29 3692 821452 0.45 825144 30 3561 816488 0.43 820049 31 3547 810375 0.44 813922 32 3391 806337 0.42 809728 33 3467 798645 0.43 802112 34 3308 791925 0.42 795233 35 3327 788915 0.42 792242 36 3308 781219 0.42 784527 37 3191 774927 0.41 778118 38 3112 769961 0.40 773073 39 3169 762459 0.41 765628 40 3182 754797 0.42 757979 41 3055 748809 0.41 751864 42 2967 741319 0.40 744286 43 3037 734630 0.41 737667 44 3033 723075 0.42 726108 45 2934 717453 0.41 720387 46 2986 711152 0.42 714138 47 2973 702380 0.42 705353 48 2861 695247 0.41 698108 49 2824 686873 0.41 689697 50 2804 679775 0.41 682579 51 2760 669655 0.41 672415 52 2773 662956 0.42 665729 53 2768 655953 0.42 658721 54 2709 646438 0.42 649147 55 2581 640458 0.40 643039 56 2619 631825 0.41 634444 57 2619 624519 0.42 627138 58 2463 615125 0.40 617588 59 2479 608063 0.41 610542 60 2413 599089 0.40 601502 61 2528 591324 0.43 593852 62 2376 584065 0.41 586441 63 2304 575169 0.40 577473 64 2342 568562 0.41 570904 65 2318 560074 0.41 562392 66 2222 552774 0.40 554996 67 2297 543751 0.42 546048 68 2233 537267 0.41 539500 69 2187 529580 0.41 531767 70 2134 521736 0.41 523870 71 2068 514249 0.40 516317 72 2128 506018 0.42 508146 73 2088 498913 0.42 501001 74 1992 490238 0.40 492230 75 1965 483733 0.40 485698 76 1963 473762 0.41 475725 77 1947 467298 0.41 469245 78 1963 461229 0.42 463192 79 1825 453780 0.40 455605 80 1870 445694 0.42 447564 81 1852 438593 0.42 440445 82 1706 430611 0.39 432317 83 1783 424069 0.42 425852 84 1793 415294 0.43 417087 85 1750 409324 0.43 411074 86 1602 402291 0.40 403893 87 1703 394672 0.43 396375 88 1575 389444 0.40 391019 89 1561 381182 0.41 382743 90 1617 373517 0.43 375134 91 1541 367768 0.42 369309 92 1483 361602 0.41 363085 93 1528 353952 0.43 355480 94 1440 347198 0.41 348638 95 1442 340368 0.42 341810 96 1386 334845 0.41 336231 97 1307 328192 0.40 329499 98 1338 321935 0.41 323273 99 1315 314397 0.42 315712 100 1331 309837 0.43 311168 101 1273 303539 0.42 304812 102 1246 297439 0.42 298685 103 1159 290502 0.40 291661 104 1226 285301 0.43 286527 105 1208 279998 0.43 281206 106 1125 273708 0.41 274833 107 1147 267733 0.43 268880 108 1047 262456 0.40 263503 109 1012 258346 0.39 259358 110 1069 252479 0.42 253548 111 993 246762 0.40 247755 112 1008 240708 0.42 241716 113 974 236494 0.41 237468 114 986 231290 0.42 232276 115 908 227071 0.40 227979 116 930 221602 0.42 222532 117 853 216986 0.39 217839 118 935 211784 0.44 212719 119 887 206131 0.43 207018 120 877 201725 0.43 202602 121 817 197582 0.41 198399 122 765 193396 0.39 194161 123 743 188610 0.39 189353 124 862 184176 0.47 185038 125 685 180431 0.38 181116 126 748 176282 0.42 177030 127 687 171761 0.40 172448 128 721 167735 0.43 168456 129 716 164176 0.43 164892 130 644 160255 0.40 160899 131 611 156460 0.39 157071 132 670 153014 0.44 153684 133 681 149696 0.45 150377 134 645 145666 0.44 146311 135 585 141989 0.41 142574 136 530 137935 0.38 138465 137 579 135357 0.43 135936 138 572 131597 0.43 132169 139 567 128492 0.44 129059 140 541 125279 0.43 125820 141 510 122890 0.41 123400 142 526 119088 0.44 119614 143 512 117135 0.44 117647 144 450 113697 0.39 114147 145 472 111005 0.42 111477 146 435 108443 0.40 108878 147 429 104780 0.41 105209 148 397 101683 0.39 102080 149 384 94422 0.41 94806 150 293 0 100.00 293 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4606865 702536 86.77 5309401 2 3829651 927552 80.50 4757203 3 3325203 1700207 66.17 5025410 4 2842680 2085067 57.69 4927747 5 1886968 2413887 43.87 4300855 6 1409388 2588956 35.25 3998344 7 1019630 2677395 27.58 3697025 8 737356 2719216 21.33 3456572 9 518334 2824699 15.50 3343033 10 355130 2932840 10.80 3287970 11 234192 3125587 6.97 3359779 12 153873 3200079 4.59 3353952 13 101296 3240636 3.03 3341932 14 66518 3268562 1.99 3335080 15 46132 3292075 1.38 3338207 16 33905 3315707 1.01 3349612 17 28088 3323609 0.84 3351697 18 23683 3321628 0.71 3345311 19 21992 3303118 0.66 3325110 20 21012 3277716 0.64 3298728 21 20051 3249945 0.61 3269996 22 19669 3222537 0.61 3242206 23 19457 3198452 0.60 3217909 24 18361 3170237 0.58 3188598 25 17598 3139141 0.56 3156739 26 16406 3112623 0.52 3129029 27 15737 3082055 0.51 3097792 28 15124 3055185 0.49 3070309 29 14689 3032326 0.48 3047015 30 14322 3004236 0.47 3018558 31 13501 2980313 0.45 2993814 32 13084 2958013 0.44 2971097 33 12648 2925728 0.43 2938376 34 12516 2902344 0.43 2914860 35 12162 2875472 0.42 2887634 36 11879 2848301 0.42 2860180 37 11623 2824175 0.41 2835798 38 11565 2794152 0.41 2805717 39 11349 2768863 0.41 2780212 40 11231 2741755 0.41 2752986 41 10845 2715761 0.40 2726606 42 10937 2687326 0.41 2698263 43 10651 2658985 0.40 2669636 44 10632 2631476 0.40 2642108 45 10623 2597999 0.41 2608622 46 10475 2571050 0.41 2581525 47 10595 2542709 0.41 2553304 48 10228 2513312 0.41 2523540 49 10113 2485059 0.41 2495172 50 10138 2457870 0.41 2468008 51 9987 2426305 0.41 2436292 52 9791 2396455 0.41 2406246 53 9425 2367478 0.40 2376903 54 9386 2338017 0.40 2347403 55 9476 2310763 0.41 2320239 56 9364 2283213 0.41 2292577 57 9219 2246192 0.41 2255411 58 8928 2218396 0.40 2227324 59 8964 2190519 0.41 2199483 60 8881 2161318 0.41 2170199 61 8787 2134355 0.41 2143142 62 8631 2106084 0.41 2114715 63 8560 2079237 0.41 2087797 64 8479 2049113 0.41 2057592 65 8207 2019619 0.40 2027826 66 8121 1991194 0.41 1999315 67 7957 1960897 0.40 1968854 68 7781 1932819 0.40 1940600 69 7555 1903687 0.40 1911242 70 7519 1878922 0.40 1886441 71 7562 1849290 0.41 1856852 72 7391 1822166 0.40 1829557 73 7335 1792609 0.41 1799944 74 7246 1766085 0.41 1773331 75 7108 1737463 0.41 1744571 76 6940 1710379 0.40 1717319 77 6814 1680896 0.40 1687710 78 6645 1653973 0.40 1660618 79 6645 1627958 0.41 1634603 80 6535 1600035 0.41 1606570 81 6433 1574163 0.41 1580596 82 6188 1547421 0.40 1553609 83 6194 1523033 0.41 1529227 84 6016 1495234 0.40 1501250 85 6033 1470481 0.41 1476514 86 5839 1443929 0.40 1449768 87 5800 1417471 0.41 1423271 88 5540 1393316 0.40 1398856 89 5455 1367296 0.40 1372751 90 5359 1342316 0.40 1347675 91 5343 1319189 0.40 1324532 92 5318 1294060 0.41 1299378 93 5143 1268900 0.40 1274043 94 5089 1246166 0.41 1251255 95 4998 1225008 0.41 1230006 96 4829 1200046 0.40 1204875 97 4775 1176695 0.40 1181470 98 4660 1152955 0.40 1157615 99 4660 1130355 0.41 1135015 100 4506 1109389 0.40 1113895 101 4465 1086655 0.41 1091120 102 4316 1066054 0.40 1070370 103 4340 1042907 0.41 1047247 104 4075 1022333 0.40 1026408 105 4027 1003200 0.40 1007227 106 3956 981813 0.40 985769 107 3767 961855 0.39 965622 108 3844 940659 0.41 944503 109 3727 920003 0.40 923730 110 3643 900693 0.40 904336 111 3515 879580 0.40 883095 112 3402 863616 0.39 867018 113 3434 841469 0.41 844903 114 3392 824987 0.41 828379 115 3288 806536 0.41 809824 116 3303 790095 0.42 793398 117 3225 770745 0.42 773970 118 3045 754185 0.40 757230 119 3060 737796 0.41 740856 120 2954 720546 0.41 723500 121 2811 703502 0.40 706313 122 2805 688493 0.41 691298 123 2774 672179 0.41 674953 124 2667 657648 0.40 660315 125 2581 640826 0.40 643407 126 2525 627340 0.40 629865 127 2450 612422 0.40 614872 128 2352 598084 0.39 600436 129 2347 585016 0.40 587363 130 2319 570645 0.40 572964 131 2333 557376 0.42 559709 132 2213 543445 0.41 545658 133 2221 530373 0.42 532594 134 2160 518413 0.41 520573 135 2066 504449 0.41 506515 136 2079 493743 0.42 495822 137 1998 481469 0.41 483467 138 1899 469945 0.40 471844 139 1889 457554 0.41 459443 140 1827 446150 0.41 447977 141 1805 435970 0.41 437775 142 1753 424411 0.41 426164 143 1692 413960 0.41 415652 144 1659 402746 0.41 404405 145 1645 393322 0.42 394967 146 1628 383339 0.42 384967 147 1650 373007 0.44 374657 148 1411 362602 0.39 364013 149 1256 334614 0.37 335870 150 1033 0 100.00 1033