SRR18245596.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 41987656 lines in total Total number of methylation call strings processed: 83975312 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1853675948 Total methylated C's in CpG context: 27669088 Total methylated C's in CHG context: 7435678 Total methylated C's in CHH context: 31530790 Total C to T conversions in CpG context: 212106482 Total C to T conversions in CHG context: 314558263 Total C to T conversions in CHH context: 1260375647 C methylated in CpG context: 11.5% C methylated in non-CpG context: 2.4%