SRR18245595.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 40363898 lines in total Total number of methylation call strings processed: 80727796 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1461454140 Total methylated C's in CpG context: 21777497 Total methylated C's in CHG context: 7121641 Total methylated C's in CHH context: 29160614 Total C to T conversions in CpG context: 190590132 Total C to T conversions in CHG context: 260187880 Total C to T conversions in CHH context: 952616376 C methylated in CpG context: 10.3% C methylated in non-CpG context: 2.9%