CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 49549 885116 5.30 934665 2 111835 1005026 10.01 1116861 3 88195 686627 11.38 774822 4 80500 919494 8.05 999994 5 93197 911479 9.28 1004676 6 105389 1088513 8.83 1193902 7 97218 902635 9.72 999853 8 91765 894884 9.30 986649 9 85038 864270 8.96 949308 10 82065 835062 8.95 917127 11 79619 860481 8.47 940100 12 78139 817574 8.72 895713 13 79001 822896 8.76 901897 14 80692 851470 8.66 932162 15 80624 861294 8.56 941918 16 80465 876638 8.41 957103 17 81822 879964 8.51 961786 18 83999 895037 8.58 979036 19 83588 885656 8.62 969244 20 83683 896702 8.54 980385 21 84161 894552 8.60 978713 22 83555 891152 8.57 974707 23 83120 883007 8.60 966127 24 83737 890423 8.60 974160 25 82516 882002 8.56 964518 26 81959 880079 8.52 962038 27 82392 885804 8.51 968196 28 82228 885894 8.49 968122 29 82097 884058 8.50 966155 30 82939 887655 8.55 970594 31 81441 884626 8.43 966067 32 82013 882163 8.51 964176 33 81768 889884 8.42 971652 34 81655 879279 8.50 960934 35 82176 883491 8.51 965667 36 82343 888672 8.48 971015 37 81577 883843 8.45 965420 38 81552 885108 8.44 966660 39 82226 890999 8.45 973225 40 81379 885244 8.42 966623 41 81940 885979 8.47 967919 42 82754 895845 8.46 978599 43 81910 880420 8.51 962330 44 82217 886208 8.49 968425 45 81851 883910 8.48 965761 46 80913 882753 8.40 963666 47 81127 884454 8.40 965581 48 81497 894727 8.35 976224 49 81359 887115 8.40 968474 50 81797 885432 8.46 967229 51 82138 890123 8.45 972261 52 81450 887116 8.41 968566 53 81349 885741 8.41 967090 54 81761 892353 8.39 974114 55 81736 883667 8.47 965403 56 81252 885086 8.41 966338 57 81641 892175 8.38 973816 58 80762 884333 8.37 965095 59 81628 883520 8.46 965148 60 81769 889031 8.42 970800 61 81092 882808 8.41 963900 62 81154 885801 8.39 966955 63 81283 891827 8.35 973110 64 81522 888871 8.40 970393 65 81073 883481 8.41 964554 66 81570 885808 8.43 967378 67 80781 879778 8.41 960559 68 81139 885186 8.40 966325 69 81682 885894 8.44 967576 70 80892 883526 8.39 964418 71 81678 883090 8.47 964768 72 81221 888679 8.37 969900 73 81056 882890 8.41 963946 74 81571 887776 8.42 969347 75 80946 886958 8.36 967904 76 81272 885546 8.41 966818 77 81555 884715 8.44 966270 78 81540 885909 8.43 967449 79 81174 882641 8.42 963815 80 80600 881733 8.38 962333 81 80816 887242 8.35 968058 82 81054 883714 8.40 964768 83 81447 883056 8.44 964503 84 81442 888278 8.40 969720 85 80578 883865 8.35 964443 86 81218 881531 8.44 962749 87 81459 885397 8.43 966856 88 81006 881554 8.42 962560 89 81026 878216 8.45 959242 90 80849 883727 8.38 964576 91 80356 881092 8.36 961448 92 80795 879484 8.41 960279 93 81504 882757 8.45 964261 94 80923 879176 8.43 960099 95 81545 881352 8.47 962897 96 81462 883788 8.44 965250 97 81270 881659 8.44 962929 98 81592 880563 8.48 962155 99 81257 881919 8.44 963176 100 80527 878287 8.40 958814 101 81200 876949 8.47 958149 102 81513 879726 8.48 961239 103 80361 874109 8.42 954470 104 81127 875943 8.48 957070 105 81779 879939 8.50 961718 106 81199 873525 8.50 954724 107 81241 871689 8.53 952930 108 81379 876020 8.50 957399 109 81134 869656 8.53 950790 110 81334 869292 8.56 950626 111 81666 871061 8.57 952727 112 81251 868240 8.56 949491 113 81831 869921 8.60 951752 114 82301 871268 8.63 953569 115 81239 864240 8.59 945479 116 81072 867501 8.55 948573 117 81817 867611 8.62 949428 118 82194 864260 8.68 946454 119 82029 862063 8.69 944092 120 82128 864053 8.68 946181 121 81328 858975 8.65 940303 122 81524 859496 8.66 941020 123 82277 860555 8.73 942832 124 81661 854569 8.72 936230 125 81806 857068 8.71 938874 126 81761 856742 8.71 938503 127 82440 849491 8.85 931931 128 81963 852342 8.77 934305 129 82402 852037 8.82 934439 130 81916 846444 8.82 928360 131 82808 846806 8.91 929614 132 82637 848807 8.87 931444 133 82397 845289 8.88 927686 134 82821 845131 8.93 927952 135 83168 842585 8.98 925753 136 83379 842429 9.01 925808 137 82973 838283 9.01 921256 138 83584 838786 9.06 922370 139 83418 834596 9.09 918014 140 83324 830410 9.12 913734 141 83410 830353 9.13 913763 142 82971 823488 9.15 906459 143 83313 824592 9.18 907905 144 83894 823421 9.25 907315 145 84091 819690 9.30 903781 146 83957 816327 9.33 900284 147 84998 818779 9.40 903777 148 84071 811502 9.39 895573 149 83533 806624 9.38 890157 150 84504 772664 9.86 857168 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 15631 1634970 0.95 1650601 2 12674 1128974 1.11 1141648 3 6956 998079 0.69 1005035 4 5940 1227788 0.48 1233728 5 7336 1427756 0.51 1435092 6 6679 1315725 0.51 1322404 7 6129 1153691 0.53 1159820 8 5269 1145215 0.46 1150484 9 5079 1124932 0.45 1130011 10 4979 1133517 0.44 1138496 11 4933 1158347 0.42 1163280 12 4743 1167240 0.40 1171983 13 4801 1166762 0.41 1171563 14 4805 1168385 0.41 1173190 15 4676 1188844 0.39 1193520 16 4795 1199505 0.40 1204300 17 5046 1212626 0.41 1217672 18 4961 1206749 0.41 1211710 19 4878 1208289 0.40 1213167 20 4927 1214181 0.40 1219108 21 5070 1222083 0.41 1227153 22 4859 1214672 0.40 1219531 23 4898 1206742 0.40 1211640 24 4836 1203080 0.40 1207916 25 4973 1202630 0.41 1207603 26 4953 1203758 0.41 1208711 27 5082 1212880 0.42 1217962 28 4891 1211236 0.40 1216127 29 4966 1209608 0.41 1214574 30 5042 1216424 0.41 1221466 31 5142 1216081 0.42 1221223 32 4962 1218246 0.41 1223208 33 5053 1217031 0.41 1222084 34 5088 1214765 0.42 1219853 35 4994 1214462 0.41 1219456 36 5137 1220607 0.42 1225744 37 4955 1218931 0.40 1223886 38 4950 1224318 0.40 1229268 39 4995 1223004 0.41 1227999 40 4882 1223227 0.40 1228109 41 5038 1223037 0.41 1228075 42 5177 1224986 0.42 1230163 43 4991 1218882 0.41 1223873 44 5099 1216203 0.42 1221302 45 5122 1217300 0.42 1222422 46 5073 1211148 0.42 1216221 47 5013 1215248 0.41 1220261 48 5170 1222522 0.42 1227692 49 5105 1221502 0.42 1226607 50 5178 1214248 0.42 1219426 51 5061 1222131 0.41 1227192 52 5102 1220763 0.42 1225865 53 5236 1218539 0.43 1223775 54 5289 1222947 0.43 1228236 55 5143 1215798 0.42 1220941 56 5144 1219334 0.42 1224478 57 5202 1217850 0.43 1223052 58 5117 1217303 0.42 1222420 59 5306 1218117 0.43 1223423 60 5294 1223214 0.43 1228508 61 5311 1223824 0.43 1229135 62 5249 1223128 0.43 1228377 63 5442 1230332 0.44 1235774 64 5279 1220530 0.43 1225809 65 5242 1216630 0.43 1221872 66 5266 1217131 0.43 1222397 67 5329 1213934 0.44 1219263 68 5274 1214891 0.43 1220165 69 5376 1222013 0.44 1227389 70 5389 1219787 0.44 1225176 71 5436 1214486 0.45 1219922 72 5543 1220181 0.45 1225724 73 5581 1217959 0.46 1223540 74 5552 1216270 0.45 1221822 75 5534 1221898 0.45 1227432 76 5654 1220428 0.46 1226082 77 5674 1216233 0.46 1221907 78 5639 1222288 0.46 1227927 79 5653 1214275 0.46 1219928 80 5791 1215436 0.47 1221227 81 5831 1219918 0.48 1225749 82 5802 1215319 0.48 1221121 83 5876 1216286 0.48 1222162 84 5834 1220195 0.48 1226029 85 5972 1216696 0.49 1222668 86 5893 1211961 0.48 1217854 87 5991 1212754 0.49 1218745 88 6195 1211024 0.51 1217219 89 6127 1212160 0.50 1218287 90 6208 1215789 0.51 1221997 91 6247 1210348 0.51 1216595 92 6222 1207786 0.51 1214008 93 6534 1214173 0.54 1220707 94 6641 1213047 0.54 1219688 95 6638 1212668 0.54 1219306 96 6691 1213661 0.55 1220352 97 6673 1205799 0.55 1212472 98 6830 1204239 0.56 1211069 99 7087 1211272 0.58 1218359 100 6937 1208487 0.57 1215424 101 7129 1201970 0.59 1209099 102 7228 1203207 0.60 1210435 103 7207 1202265 0.60 1209472 104 7372 1201783 0.61 1209155 105 7696 1204262 0.64 1211958 106 7670 1202044 0.63 1209714 107 7878 1196867 0.65 1204745 108 8203 1202987 0.68 1211190 109 8139 1198133 0.67 1206272 110 8478 1200184 0.70 1208662 111 8578 1202933 0.71 1211511 112 8637 1199732 0.71 1208369 113 8793 1194533 0.73 1203326 114 8981 1194019 0.75 1203000 115 9210 1186730 0.77 1195940 116 9528 1189911 0.79 1199439 117 9649 1190952 0.80 1200601 118 9916 1187230 0.83 1197146 119 10224 1186916 0.85 1197140 120 10594 1187395 0.88 1197989 121 10614 1182831 0.89 1193445 122 11007 1179961 0.92 1190968 123 11291 1182258 0.95 1193549 124 11714 1181536 0.98 1193250 125 12052 1179990 1.01 1192042 126 12212 1178766 1.03 1190978 127 12518 1171763 1.06 1184281 128 12919 1170096 1.09 1183015 129 13226 1170525 1.12 1183751 130 13775 1164724 1.17 1178499 131 13892 1162301 1.18 1176193 132 14204 1164232 1.21 1178436 133 14432 1159125 1.23 1173557 134 14948 1156478 1.28 1171426 135 15483 1155014 1.32 1170497 136 15547 1149153 1.33 1164700 137 16251 1145939 1.40 1162190 138 16619 1147403 1.43 1164022 139 16958 1140046 1.47 1157004 140 17304 1138421 1.50 1155725 141 17489 1136217 1.52 1153706 142 18260 1133084 1.59 1151344 143 18878 1127388 1.65 1146266 144 19635 1129047 1.71 1148682 145 20272 1126259 1.77 1146531 146 21045 1123140 1.84 1144185 147 22111 1122564 1.93 1144675 148 22668 1114117 1.99 1136785 149 29892 1112200 2.62 1142092 150 27439 1052196 2.54 1079635 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 27386 4225525 0.64 4252911 2 49466 3639999 1.34 3689465 3 23304 3341614 0.69 3364918 4 22010 4151019 0.53 4173029 5 23026 4313448 0.53 4336474 6 21290 4275957 0.50 4297247 7 20909 3848035 0.54 3868944 8 19043 4023822 0.47 4042865 9 18689 4124219 0.45 4142908 10 17677 4165802 0.42 4183479 11 17463 4335883 0.40 4353346 12 17197 4324464 0.40 4341661 13 16430 4316886 0.38 4333316 14 16760 4326169 0.39 4342929 15 16962 4324967 0.39 4341929 16 17262 4287847 0.40 4305109 17 17644 4284045 0.41 4301689 18 18068 4323509 0.42 4341577 19 18116 4324714 0.42 4342830 20 18340 4339865 0.42 4358205 21 18409 4363482 0.42 4381891 22 18221 4324931 0.42 4343152 23 18734 4316983 0.43 4335717 24 18775 4349682 0.43 4368457 25 18839 4354002 0.43 4372841 26 19149 4365349 0.44 4384498 27 19308 4394975 0.44 4414283 28 19264 4394925 0.44 4414189 29 19208 4411700 0.43 4430908 30 19497 4441935 0.44 4461432 31 18962 4427658 0.43 4446620 32 18862 4420690 0.42 4439552 33 18815 4446511 0.42 4465326 34 18803 4416382 0.42 4435185 35 18233 4422406 0.41 4440639 36 18598 4443316 0.42 4461914 37 18454 4433500 0.41 4451954 38 18337 4435588 0.41 4453925 39 18452 4459283 0.41 4477735 40 18725 4442158 0.42 4460883 41 18669 4442351 0.42 4461020 42 18541 4460192 0.41 4478733 43 18335 4430962 0.41 4449297 44 18630 4428823 0.42 4447453 45 18718 4439435 0.42 4458153 46 18434 4429161 0.41 4447595 47 18414 4430765 0.41 4449179 48 18534 4450865 0.41 4469399 49 18590 4428625 0.42 4447215 50 18531 4429814 0.42 4448345 51 18849 4447826 0.42 4466675 52 18824 4437818 0.42 4456642 53 18770 4428063 0.42 4446833 54 19162 4443609 0.43 4462771 55 18934 4430654 0.43 4449588 56 19060 4442496 0.43 4461556 57 19293 4452683 0.43 4471976 58 19152 4443149 0.43 4462301 59 18970 4435868 0.43 4454838 60 19079 4452375 0.43 4471454 61 19378 4427984 0.44 4447362 62 19436 4435641 0.44 4455077 63 19634 4443053 0.44 4462687 64 19395 4428488 0.44 4447883 65 19718 4417566 0.44 4437284 66 19769 4438909 0.44 4458678 67 19930 4425468 0.45 4445398 68 19869 4433749 0.45 4453618 69 20103 4440512 0.45 4460615 70 19985 4437366 0.45 4457351 71 20155 4434685 0.45 4454840 72 20365 4449967 0.46 4470332 73 20436 4431775 0.46 4452211 74 20841 4436263 0.47 4457104 75 20673 4442189 0.46 4462862 76 20805 4427943 0.47 4448748 77 20880 4425818 0.47 4446698 78 21144 4440926 0.47 4462070 79 21493 4424979 0.48 4446472 80 21422 4418840 0.48 4440262 81 21640 4432570 0.49 4454210 82 21840 4419728 0.49 4441568 83 21918 4420817 0.49 4442735 84 22366 4436549 0.50 4458915 85 22412 4407817 0.51 4430229 86 22750 4414596 0.51 4437346 87 23188 4427614 0.52 4450802 88 23138 4423573 0.52 4446711 89 23622 4418482 0.53 4442104 90 23806 4430012 0.53 4453818 91 23823 4411801 0.54 4435624 92 24443 4407347 0.55 4431790 93 24425 4419079 0.55 4443504 94 24592 4405173 0.56 4429765 95 25128 4400738 0.57 4425866 96 25685 4410484 0.58 4436169 97 26317 4397895 0.59 4424212 98 26398 4402169 0.60 4428567 99 27105 4412126 0.61 4439231 100 27073 4397245 0.61 4424318 101 27804 4403341 0.63 4431145 102 28363 4408928 0.64 4437291 103 28707 4388158 0.65 4416865 104 29277 4388965 0.66 4418242 105 29874 4405676 0.67 4435550 106 30659 4386541 0.69 4417200 107 30945 4388958 0.70 4419903 108 31742 4395786 0.72 4427528 109 32501 4383049 0.74 4415550 110 32997 4379893 0.75 4412890 111 33963 4383240 0.77 4417203 112 34331 4373519 0.78 4407850 113 35398 4357156 0.81 4392554 114 36558 4364230 0.83 4400788 115 37190 4356505 0.85 4393695 116 37983 4350181 0.87 4388164 117 39133 4361124 0.89 4400257 118 40523 4342450 0.92 4382973 119 41396 4335663 0.95 4377059 120 42238 4343097 0.96 4385335 121 43731 4329344 1.00 4373075 122 44708 4333811 1.02 4378519 123 45718 4344056 1.04 4389774 124 47067 4326938 1.08 4374005 125 48753 4313494 1.12 4362247 126 50427 4318838 1.15 4369265 127 51351 4295569 1.18 4346920 128 53174 4289978 1.22 4343152 129 54188 4285243 1.25 4339431 130 55632 4278169 1.28 4333801 131 57085 4276408 1.32 4333493 132 58717 4273490 1.36 4332207 133 60807 4255804 1.41 4316611 134 62518 4241222 1.45 4303740 135 64202 4237290 1.49 4301492 136 65495 4221351 1.53 4286846 137 67544 4208268 1.58 4275812 138 68932 4211895 1.61 4280827 139 70890 4186852 1.66 4257742 140 72922 4186609 1.71 4259531 141 74401 4179022 1.75 4253423 142 76464 4163919 1.80 4240383 143 79089 4152075 1.87 4231164 144 81810 4162141 1.93 4243951 145 85708 4146923 2.02 4232631 146 88501 4141743 2.09 4230244 147 94847 4138126 2.24 4232973 148 95782 4110088 2.28 4205870 149 94124 4060666 2.27 4154790 150 91010 3893963 2.28 3984973 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1561530 238173 86.77 1799703 2 538429 120015 81.77 658444 3 404761 186964 68.40 591725 4 461434 313932 59.51 775366 5 310945 354452 46.73 665397 6 236316 392177 37.60 628493 7 182215 485533 27.29 667748 8 158528 563503 21.96 722031 9 137213 628023 17.93 765236 10 117925 667667 15.01 785592 11 101686 709045 12.54 810731 12 92138 720113 11.34 812251 13 84977 723120 10.52 808097 14 79488 726494 9.86 805982 15 74726 729120 9.30 803846 16 72662 728088 9.07 800750 17 73199 724238 9.18 797437 18 71567 720417 9.04 791984 19 71042 717369 9.01 788411 20 71250 716172 9.05 787422 21 71166 714719 9.06 785885 22 70682 713224 9.02 783906 23 70161 713222 8.96 783383 24 69411 711233 8.89 780644 25 69192 707516 8.91 776708 26 68651 705219 8.87 773870 27 68728 702866 8.91 771594 28 67883 701238 8.83 769121 29 67540 697692 8.83 765232 30 66718 694769 8.76 761487 31 66488 691139 8.78 757627 32 65424 688869 8.67 754293 33 65577 684099 8.75 749676 34 64522 677113 8.70 741635 35 63991 672763 8.69 736754 36 63500 667362 8.69 730862 37 63593 662331 8.76 725924 38 62884 658342 8.72 721226 39 61580 652812 8.62 714392 40 61528 647983 8.67 709511 41 61202 642740 8.69 703942 42 60064 637434 8.61 697498 43 59505 629414 8.64 688919 44 58948 624147 8.63 683095 45 57911 619781 8.55 677692 46 57768 611507 8.63 669275 47 56446 606437 8.52 662883 48 55846 598805 8.53 654651 49 55874 595145 8.58 651019 50 55127 586899 8.59 642026 51 54271 581060 8.54 635331 52 53795 574504 8.56 628299 53 52558 567948 8.47 620506 54 52326 561741 8.52 614067 55 51897 555831 8.54 607728 56 50934 548696 8.49 599630 57 51174 541297 8.64 592471 58 49661 536812 8.47 586473 59 48947 529457 8.46 578404 60 48440 520618 8.51 569058 61 47876 514229 8.52 562105 62 47193 507386 8.51 554579 63 46493 499550 8.51 546043 64 46108 493569 8.54 539677 65 44889 487506 8.43 532395 66 44595 479811 8.50 524406 67 44165 473544 8.53 517709 68 43036 466356 8.45 509392 69 42163 459329 8.41 501492 70 41990 452472 8.49 494462 71 40739 447206 8.35 487945 72 40732 439301 8.49 480033 73 39943 433243 8.44 473186 74 39332 424952 8.47 464284 75 38396 417755 8.42 456151 76 37865 411500 8.43 449365 77 37636 404825 8.51 442461 78 36575 398044 8.42 434619 79 35837 391520 8.39 427357 80 35630 385017 8.47 420647 81 34658 377617 8.41 412275 82 34290 372719 8.42 407009 83 33497 365172 8.40 398669 84 32892 358285 8.41 391177 85 32553 351758 8.47 384311 86 31691 344230 8.43 375921 87 31262 337923 8.47 369185 88 30717 333309 8.44 364026 89 29876 327112 8.37 356988 90 29246 321273 8.34 350519 91 28885 314707 8.41 343592 92 28375 308929 8.41 337304 93 27639 302249 8.38 329888 94 27270 296704 8.42 323974 95 26361 290789 8.31 317150 96 25862 283787 8.35 309649 97 26025 280159 8.50 306184 98 25043 273487 8.39 298530 99 24317 267322 8.34 291639 100 24177 261866 8.45 286043 101 23466 256538 8.38 280004 102 22854 251404 8.33 274258 103 22443 246924 8.33 269367 104 21921 241434 8.32 263355 105 21458 236119 8.33 257577 106 20850 231559 8.26 252409 107 20733 226456 8.39 247189 108 19953 221144 8.28 241097 109 19600 216578 8.30 236178 110 19019 211056 8.27 230075 111 19070 206446 8.46 225516 112 18194 202175 8.26 220369 113 17982 197795 8.33 215777 114 17310 194319 8.18 211629 115 17079 189191 8.28 206270 116 16704 184974 8.28 201678 117 16404 180540 8.33 196944 118 15831 176365 8.24 192196 119 15448 172213 8.23 187661 120 15227 168123 8.30 183350 121 14696 163728 8.24 178424 122 14456 161458 8.22 175914 123 14071 156304 8.26 170375 124 13792 153208 8.26 167000 125 13517 149460 8.29 162977 126 13240 145945 8.32 159185 127 12887 141978 8.32 154865 128 12615 138592 8.34 151207 129 12232 135745 8.27 147977 130 12019 132896 8.29 144915 131 11516 129397 8.17 140913 132 11297 126087 8.22 137384 133 10991 123074 8.20 134065 134 10538 119993 8.07 130531 135 10434 116943 8.19 127377 136 10216 114305 8.20 124521 137 9984 111375 8.23 121359 138 9243 108363 7.86 117606 139 9480 106218 8.19 115698 140 9225 102948 8.22 112173 141 8956 100534 8.18 109490 142 8646 97775 8.12 106421 143 8478 95692 8.14 104170 144 8256 93661 8.10 101917 145 7950 90759 8.05 98709 146 7850 88538 8.14 96388 147 7614 86051 8.13 93665 148 7371 83308 8.13 90679 149 7088 74871 8.65 81959 150 6401 0 100.00 6401 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1795790 274093 86.76 2069883 2 1593970 392277 80.25 1986247 3 477966 215686 68.91 693652 4 465310 327158 58.72 792468 5 387043 485402 44.36 872445 6 255530 476012 34.93 731542 7 191080 537714 26.22 728794 8 132824 656290 16.83 789114 9 96998 770865 11.18 867863 10 67055 856931 7.26 923986 11 46108 926347 4.74 972455 12 30932 958912 3.12 989844 13 21356 969460 2.16 990816 14 14950 978121 1.51 993071 15 10518 984932 1.06 995450 16 8521 991661 0.85 1000182 17 7630 993104 0.76 1000734 18 6373 989898 0.64 996271 19 6349 977523 0.65 983872 20 5957 970363 0.61 976320 21 5386 968725 0.55 974111 22 5863 968655 0.60 974518 23 5165 968339 0.53 973504 24 4664 964525 0.48 969189 25 4794 961237 0.50 966031 26 4525 960287 0.47 964812 27 4457 955327 0.46 959784 28 4436 953777 0.46 958213 29 3976 948025 0.42 952001 30 4019 943934 0.42 947953 31 3896 939487 0.41 943383 32 3757 935185 0.40 938942 33 3844 929568 0.41 933412 34 3779 923119 0.41 926898 35 3585 916573 0.39 920158 36 3550 909405 0.39 912955 37 3624 903242 0.40 906866 38 3497 897189 0.39 900686 39 3437 890309 0.38 893746 40 3512 882068 0.40 885580 41 3397 873239 0.39 876636 42 3503 865940 0.40 869443 43 3437 858568 0.40 862005 44 3465 847062 0.41 850527 45 3334 840265 0.40 843599 46 3271 832617 0.39 835888 47 3266 822294 0.40 825560 48 3296 816038 0.40 819334 49 3106 805265 0.38 808371 50 3047 797439 0.38 800486 51 3195 786653 0.40 789848 52 3108 780029 0.40 783137 53 3024 771016 0.39 774040 54 3044 760196 0.40 763240 55 2926 752432 0.39 755358 56 2950 741497 0.40 744447 57 2922 734311 0.40 737233 58 2893 724403 0.40 727296 59 2806 713854 0.39 716660 60 2778 704577 0.39 707355 61 2764 694608 0.40 697372 62 2732 686357 0.40 689089 63 2702 676094 0.40 678796 64 2685 667971 0.40 670656 65 2620 658518 0.40 661138 66 2468 647519 0.38 649987 67 2492 638737 0.39 641229 68 2430 630683 0.38 633113 69 2445 620523 0.39 622968 70 2451 611508 0.40 613959 71 2361 602668 0.39 605029 72 2368 591590 0.40 593958 73 2398 583419 0.41 585817 74 2272 572480 0.40 574752 75 2293 564254 0.40 566547 76 2278 554450 0.41 556728 77 2168 544324 0.40 546492 78 2122 538229 0.39 540351 79 2025 528322 0.38 530347 80 2065 518941 0.40 521006 81 2018 509976 0.39 511994 82 2046 500860 0.41 502906 83 1970 492021 0.40 493991 84 1880 482679 0.39 484559 85 1904 475260 0.40 477164 86 1877 463431 0.40 465308 87 1791 456398 0.39 458189 88 1823 448970 0.40 450793 89 1729 440288 0.39 442017 90 1691 432076 0.39 433767 91 1650 423110 0.39 424760 92 1603 415993 0.38 417596 93 1654 408590 0.40 410244 94 1627 400104 0.40 401731 95 1523 392351 0.39 393874 96 1493 383890 0.39 385383 97 1459 375553 0.39 377012 98 1468 367555 0.40 369023 99 1389 360117 0.38 361506 100 1466 354788 0.41 356254 101 1331 345458 0.38 346789 102 1319 337842 0.39 339161 103 1323 331078 0.40 332401 104 1330 324459 0.41 325789 105 1262 317789 0.40 319051 106 1238 310938 0.40 312176 107 1196 303876 0.39 305072 108 1158 297830 0.39 298988 109 1193 291767 0.41 292960 110 1136 285361 0.40 286497 111 1113 277416 0.40 278529 112 1068 271854 0.39 272922 113 1078 266290 0.40 267368 114 1077 260808 0.41 261885 115 1026 254442 0.40 255468 116 1012 248893 0.40 249905 117 957 243746 0.39 244703 118 928 237424 0.39 238352 119 963 231883 0.41 232846 120 908 226763 0.40 227671 121 838 222422 0.38 223260 122 888 215593 0.41 216481 123 857 211169 0.40 212026 124 848 204899 0.41 205747 125 829 200607 0.41 201436 126 755 195491 0.38 196246 127 738 191457 0.38 192195 128 755 186711 0.40 187466 129 741 182434 0.40 183175 130 688 178820 0.38 179508 131 694 174683 0.40 175377 132 709 169295 0.42 170004 133 650 164937 0.39 165587 134 615 161993 0.38 162608 135 642 157212 0.41 157854 136 604 154022 0.39 154626 137 639 149993 0.42 150632 138 589 146568 0.40 147157 139 603 142392 0.42 142995 140 589 139317 0.42 139906 141 544 135748 0.40 136292 142 491 131870 0.37 132361 143 538 128251 0.42 128789 144 562 125584 0.45 126146 145 516 122504 0.42 123020 146 495 119417 0.41 119912 147 466 115804 0.40 116270 148 436 113224 0.38 113660 149 389 102426 0.38 102815 150 290 0 100.00 290 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 5066602 767822 86.84 5834424 2 4209228 1022816 80.45 5232044 3 3655487 1866337 66.20 5521824 4 3132444 2306564 57.59 5439008 5 2099573 2677638 43.95 4777211 6 1559261 2872397 35.18 4431658 7 1125625 2973360 27.46 4098985 8 814769 3033929 21.17 3848698 9 569966 3170210 15.24 3740176 10 389682 3297910 10.57 3687592 11 256066 3519843 6.78 3775909 12 168151 3614549 4.45 3782700 13 110513 3667738 2.92 3778251 14 72952 3697028 1.94 3769980 15 50560 3734867 1.34 3785427 16 38111 3763352 1.00 3801463 17 30946 3785324 0.81 3816270 18 26915 3794024 0.70 3820939 19 24690 3783604 0.65 3808294 20 23290 3761980 0.62 3785270 21 22621 3736794 0.60 3759415 22 22074 3708657 0.59 3730731 23 21983 3682890 0.59 3704873 24 20835 3652066 0.57 3672901 25 19398 3628266 0.53 3647664 26 18721 3600928 0.52 3619649 27 17620 3573762 0.49 3591382 28 17141 3548050 0.48 3565191 29 16357 3523046 0.46 3539403 30 15782 3495186 0.45 3510968 31 15048 3473200 0.43 3488248 32 14560 3444082 0.42 3458642 33 14040 3415103 0.41 3429143 34 13979 3390488 0.41 3404467 35 13436 3364742 0.40 3378178 36 13097 3336663 0.39 3349760 37 13123 3308424 0.40 3321547 38 12900 3283492 0.39 3296392 39 12547 3257408 0.38 3269955 40 12654 3224981 0.39 3237635 41 12264 3199688 0.38 3211952 42 12192 3166080 0.38 3178272 43 12220 3136808 0.39 3149028 44 12052 3107773 0.39 3119825 45 11945 3074046 0.39 3085991 46 11726 3039647 0.38 3051373 47 11565 3011487 0.38 3023052 48 11530 2977137 0.39 2988667 49 11498 2945488 0.39 2956986 50 11209 2914959 0.38 2926168 51 10981 2881243 0.38 2892224 52 11045 2847565 0.39 2858610 53 11070 2815304 0.39 2826374 54 10908 2779710 0.39 2790618 55 10587 2741207 0.38 2751794 56 10484 2708686 0.39 2719170 57 10340 2676323 0.38 2686663 58 10300 2638857 0.39 2649157 59 9998 2607931 0.38 2617929 60 10011 2570306 0.39 2580317 61 9874 2534883 0.39 2544757 62 9903 2501181 0.39 2511084 63 9489 2467676 0.38 2477165 64 9391 2435635 0.38 2445026 65 9257 2399214 0.38 2408471 66 9210 2367520 0.39 2376730 67 8986 2331838 0.38 2340824 68 8984 2297900 0.39 2306884 69 8662 2263440 0.38 2272102 70 8531 2227604 0.38 2236135 71 8403 2192694 0.38 2201097 72 8552 2158117 0.39 2166669 73 8068 2122606 0.38 2130674 74 8094 2091163 0.39 2099257 75 8073 2053839 0.39 2061912 76 7862 2025110 0.39 2032972 77 7913 1989278 0.40 1997191 78 7567 1955629 0.39 1963196 79 7482 1923710 0.39 1931192 80 7349 1887762 0.39 1895111 81 7122 1858722 0.38 1865844 82 7080 1824552 0.39 1831632 83 7030 1790445 0.39 1797475 84 6924 1759055 0.39 1765979 85 6762 1727198 0.39 1733960 86 6590 1694974 0.39 1701564 87 6437 1666058 0.38 1672495 88 6376 1632960 0.39 1639336 89 6291 1603615 0.39 1609906 90 6147 1571986 0.39 1578133 91 6125 1542695 0.40 1548820 92 5798 1510209 0.38 1516007 93 5852 1480833 0.39 1486685 94 5799 1453111 0.40 1458910 95 5592 1423566 0.39 1429158 96 5617 1394738 0.40 1400355 97 5429 1368795 0.40 1374224 98 5297 1337723 0.39 1343020 99 5181 1311712 0.39 1316893 100 4944 1282819 0.38 1287763 101 4946 1258564 0.39 1263510 102 4690 1230090 0.38 1234780 103 4664 1205343 0.39 1210007 104 4640 1177547 0.39 1182187 105 4468 1152569 0.39 1157037 106 4439 1130518 0.39 1134957 107 4345 1105541 0.39 1109886 108 4195 1077745 0.39 1081940 109 4226 1056017 0.40 1060243 110 3989 1033516 0.38 1037505 111 3995 1010482 0.39 1014477 112 3995 990223 0.40 994218 113 3778 965479 0.39 969257 114 3632 943434 0.38 947066 115 3485 921863 0.38 925348 116 3464 901100 0.38 904564 117 3452 881298 0.39 884750 118 3347 859181 0.39 862528 119 3357 839630 0.40 842987 120 3145 817660 0.38 820805 121 3141 801683 0.39 804824 122 3072 781534 0.39 784606 123 2982 763110 0.39 766092 124 2924 746510 0.39 749434 125 2872 727351 0.39 730223 126 2827 711070 0.40 713897 127 2718 695089 0.39 697807 128 2656 677931 0.39 680587 129 2523 662466 0.38 664989 130 2509 645945 0.39 648454 131 2509 629947 0.40 632456 132 2391 616072 0.39 618463 133 2372 600651 0.39 603023 134 2237 585622 0.38 587859 135 2308 570158 0.40 572466 136 2175 556605 0.39 558780 137 2121 543598 0.39 545719 138 2077 529814 0.39 531891 139 1987 516527 0.38 518514 140 2047 502962 0.41 505009 141 1933 491598 0.39 493531 142 1916 477932 0.40 479848 143 1811 466150 0.39 467961 144 1856 454789 0.41 456645 145 1756 443386 0.39 445142 146 1798 431190 0.42 432988 147 1648 418267 0.39 419915 148 1588 408060 0.39 409648 149 1394 373759 0.37 375153 150 1044 0 100.00 1044