SRR18245593.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 45990563 lines in total Total number of methylation call strings processed: 91981126 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1470684202 Total methylated C's in CpG context: 23582518 Total methylated C's in CHG context: 7940931 Total methylated C's in CHH context: 33510520 Total C to T conversions in CpG context: 181531133 Total C to T conversions in CHG context: 255821722 Total C to T conversions in CHH context: 968297378 C methylated in CpG context: 11.5% C methylated in non-CpG context: 3.3%