CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 51940 949279 5.19 1001219 2 140260 1142214 10.94 1282474 3 104991 725194 12.65 830185 4 97472 1016430 8.75 1113902 5 113269 987372 10.29 1100641 6 134279 1220184 9.91 1354463 7 122123 989364 10.99 1111487 8 113461 967619 10.50 1081080 9 106534 937661 10.20 1044195 10 102405 901335 10.20 1003740 11 98902 928296 9.63 1027198 12 96287 876189 9.90 972476 13 96750 883573 9.87 980323 14 99172 910267 9.82 1009439 15 99444 925278 9.70 1024722 16 100240 942581 9.61 1042821 17 101980 953440 9.66 1055420 18 105098 969254 9.78 1074352 19 104648 961313 9.82 1065961 20 105356 966782 9.83 1072138 21 105334 963542 9.85 1068876 22 105059 955651 9.90 1060710 23 104958 953364 9.92 1058322 24 106651 957432 10.02 1064083 25 105217 947127 10.00 1052344 26 104530 942765 9.98 1047295 27 106094 949321 10.05 1055415 28 105462 950632 9.99 1056094 29 105135 946717 10.00 1051852 30 106796 951573 10.09 1058369 31 106029 942582 10.11 1048611 32 105597 940093 10.10 1045690 33 105903 946807 10.06 1052710 34 104778 937191 10.06 1041969 35 105047 938598 10.07 1043645 36 104940 947014 9.98 1051954 37 103896 936080 9.99 1039976 38 104307 937333 10.01 1041640 39 104800 942819 10.00 1047619 40 105122 937290 10.08 1042412 41 104176 935092 10.02 1039268 42 105391 946228 10.02 1051619 43 103934 932600 10.03 1036534 44 105711 928435 10.22 1034146 45 103906 929695 10.05 1033601 46 102913 928470 9.98 1031383 47 103656 926699 10.06 1030355 48 103804 935524 9.99 1039328 49 103826 929599 10.05 1033425 50 104000 928973 10.07 1032973 51 104530 930208 10.10 1034738 52 103065 923826 10.04 1026891 53 102533 921574 10.01 1024107 54 102837 926739 9.99 1029576 55 102036 917189 10.01 1019225 56 101968 918897 9.99 1020865 57 102230 921846 9.98 1024076 58 101632 914802 10.00 1016434 59 101903 914570 10.03 1016473 60 102617 918031 10.05 1020648 61 101841 910456 10.06 1012297 62 101404 914309 9.98 1015713 63 102177 916052 10.03 1018229 64 100937 911657 9.97 1012594 65 101375 907399 10.05 1008774 66 101316 908086 10.04 1009402 67 100273 901895 10.01 1002168 68 100718 905342 10.01 1006060 69 100735 906630 10.00 1007365 70 100214 900601 10.01 1000815 71 100773 899900 10.07 1000673 72 100625 904226 10.01 1004851 73 100268 899480 10.03 999748 74 100246 898541 10.04 998787 75 100027 901030 9.99 1001057 76 99531 894237 10.02 993768 77 100131 895709 10.05 995840 78 99988 895668 10.04 995656 79 99411 892212 10.03 991623 80 99096 887975 10.04 987071 81 99608 891186 10.05 990794 82 98092 888133 9.95 986225 83 99039 885831 10.06 984870 84 99311 889595 10.04 988906 85 98349 885686 9.99 984035 86 98615 883482 10.04 982097 87 99544 883098 10.13 982642 88 98585 877675 10.10 976260 89 98453 875191 10.11 973644 90 98255 877010 10.07 975265 91 97994 875172 10.07 973166 92 97541 872695 10.05 970236 93 97373 874562 10.02 971935 94 97682 868824 10.11 966506 95 98282 868052 10.17 966334 96 97875 869837 10.11 967712 97 98067 865867 10.17 963934 98 97497 865502 10.12 962999 99 98074 864965 10.18 963039 100 96659 859893 10.10 956552 101 96932 856713 10.16 953645 102 97140 858747 10.16 955887 103 95706 850447 10.12 946153 104 96577 850725 10.19 947302 105 96581 853210 10.17 949791 106 96464 847782 10.22 944246 107 96447 844191 10.25 940638 108 96484 846796 10.23 943280 109 96546 838308 10.33 934854 110 96136 838029 10.29 934165 111 96185 839173 10.28 935358 112 96370 834320 10.35 930690 113 95678 831812 10.32 927490 114 96640 831984 10.41 928624 115 96179 826052 10.43 922231 116 96298 825702 10.44 922000 117 96097 823180 10.45 919277 118 96247 820101 10.50 916348 119 96347 816491 10.55 912838 120 96151 818724 10.51 914875 121 94645 809607 10.47 904252 122 94626 807376 10.49 902002 123 95161 805107 10.57 900268 124 94819 800349 10.59 895168 125 94515 799608 10.57 894123 126 95146 800245 10.63 895391 127 94816 793667 10.67 888483 128 94831 790606 10.71 885437 129 93866 788292 10.64 882158 130 94624 781122 10.80 875746 131 94844 781576 10.82 876420 132 94640 781116 10.81 875756 133 94303 775084 10.85 869387 134 94775 773260 10.92 868035 135 94064 770791 10.88 864855 136 94210 766158 10.95 860368 137 93485 762479 10.92 855964 138 93726 760402 10.97 854128 139 93659 752566 11.07 846225 140 93134 748458 11.07 841592 141 93692 746479 11.15 840171 142 92443 739917 11.11 832360 143 93062 738509 11.19 831571 144 92597 736721 11.17 829318 145 92380 729833 11.24 822213 146 92327 727373 11.26 819700 147 93760 725945 11.44 819705 148 91869 720444 11.31 812313 149 92023 715066 11.40 807089 150 93205 688605 11.92 781810 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 20797 1975858 1.04 1996655 2 17005 1324678 1.27 1341683 3 8422 1113604 0.75 1122026 4 7237 1387454 0.52 1394691 5 9705 1660672 0.58 1670377 6 9259 1525319 0.60 1534578 7 7743 1303481 0.59 1311224 8 6688 1296968 0.51 1303656 9 6493 1264760 0.51 1271253 10 6600 1266512 0.52 1273112 11 6691 1293174 0.51 1299865 12 5993 1304769 0.46 1310762 13 5857 1301760 0.45 1307617 14 5788 1310192 0.44 1315980 15 5918 1330228 0.44 1336146 16 5951 1348515 0.44 1354466 17 6230 1367802 0.45 1374032 18 6214 1363005 0.45 1369219 19 6433 1359430 0.47 1365863 20 6941 1362522 0.51 1369463 21 7461 1366908 0.54 1374369 22 8110 1356292 0.59 1364402 23 8370 1348202 0.62 1356572 24 9001 1344728 0.66 1353729 25 9483 1340948 0.70 1350431 26 10219 1338150 0.76 1348369 27 10618 1350028 0.78 1360646 28 10919 1341948 0.81 1352867 29 12513 1341387 0.92 1353900 30 13136 1352680 0.96 1365816 31 12714 1346402 0.94 1359116 32 12707 1345285 0.94 1357992 33 12561 1344002 0.93 1356563 34 12460 1336868 0.92 1349328 35 11870 1335695 0.88 1347565 36 12051 1345009 0.89 1357060 37 11788 1337263 0.87 1349051 38 12080 1347652 0.89 1359732 39 12655 1344145 0.93 1356800 40 12412 1339166 0.92 1351578 41 12638 1337653 0.94 1350291 42 12437 1340555 0.92 1352992 43 12492 1330823 0.93 1343315 44 12439 1326867 0.93 1339306 45 12909 1324762 0.97 1337671 46 12587 1318064 0.95 1330651 47 12628 1321121 0.95 1333749 48 12946 1325883 0.97 1338829 49 13249 1323075 0.99 1336324 50 13275 1314693 1.00 1327968 51 13450 1319053 1.01 1332503 52 13421 1314964 1.01 1328385 53 13660 1317922 1.03 1331582 54 13577 1317658 1.02 1331235 55 13292 1309550 1.00 1322842 56 13545 1308690 1.02 1322235 57 13512 1306357 1.02 1319869 58 13461 1306725 1.02 1320186 59 13963 1304112 1.06 1318075 60 14079 1312100 1.06 1326179 61 13949 1310281 1.05 1324230 62 14120 1306293 1.07 1320413 63 14059 1309098 1.06 1323157 64 14099 1297730 1.07 1311829 65 14215 1292267 1.09 1306482 66 13968 1291057 1.07 1305025 67 14203 1287632 1.09 1301835 68 14115 1286872 1.08 1300987 69 14263 1291045 1.09 1305308 70 14158 1287701 1.09 1301859 71 14435 1281876 1.11 1296311 72 14634 1282061 1.13 1296695 73 14469 1278949 1.12 1293418 74 14871 1278527 1.15 1293398 75 14688 1279423 1.13 1294111 76 14821 1278181 1.15 1293002 77 14535 1269777 1.13 1284312 78 14858 1274662 1.15 1289520 79 15038 1269111 1.17 1284149 80 15188 1265532 1.19 1280720 81 15395 1264334 1.20 1279729 82 15232 1261327 1.19 1276559 83 15164 1260129 1.19 1275293 84 15323 1266725 1.20 1282048 85 15498 1258924 1.22 1274422 86 15466 1253442 1.22 1268908 87 15549 1251479 1.23 1267028 88 15813 1247960 1.25 1263773 89 16014 1245405 1.27 1261419 90 16195 1248977 1.28 1265172 91 16093 1241041 1.28 1257134 92 16139 1234513 1.29 1250652 93 16583 1241438 1.32 1258021 94 16567 1238847 1.32 1255414 95 16815 1234147 1.34 1250962 96 17258 1234438 1.38 1251696 97 17214 1227008 1.38 1244222 98 17604 1220857 1.42 1238461 99 17375 1223038 1.40 1240413 100 17724 1218652 1.43 1236376 101 17700 1210869 1.44 1228569 102 18121 1212086 1.47 1230207 103 18343 1205815 1.50 1224158 104 18308 1203692 1.50 1222000 105 18789 1204639 1.54 1223428 106 18856 1199623 1.55 1218479 107 19188 1194583 1.58 1213771 108 19518 1197501 1.60 1217019 109 19574 1190060 1.62 1209634 110 20277 1187854 1.68 1208131 111 20544 1189295 1.70 1209839 112 20803 1181775 1.73 1202578 113 21108 1175452 1.76 1196560 114 21068 1174706 1.76 1195774 115 21752 1168106 1.83 1189858 116 21875 1163097 1.85 1184972 117 22060 1164380 1.86 1186440 118 22909 1158907 1.94 1181816 119 23140 1156083 1.96 1179223 120 23533 1155290 2.00 1178823 121 23718 1147940 2.02 1171658 122 23912 1141511 2.05 1165423 123 24426 1140953 2.10 1165379 124 24490 1134889 2.11 1159379 125 25042 1130503 2.17 1155545 126 25483 1129450 2.21 1154933 127 25901 1120766 2.26 1146667 128 26042 1117031 2.28 1143073 129 26523 1112305 2.33 1138828 130 27062 1105534 2.39 1132596 131 27367 1098025 2.43 1125392 132 27665 1099839 2.45 1127504 133 28187 1089029 2.52 1117216 134 27958 1085907 2.51 1113865 135 28702 1083073 2.58 1111775 136 29029 1073150 2.63 1102179 137 29273 1068356 2.67 1097629 138 30062 1063690 2.75 1093752 139 30097 1056954 2.77 1087051 140 30366 1051993 2.81 1082359 141 30663 1047871 2.84 1078534 142 31077 1041135 2.90 1072212 143 31492 1035028 2.95 1066520 144 32112 1033178 3.01 1065290 145 32549 1030179 3.06 1062728 146 33899 1023745 3.21 1057644 147 34546 1021035 3.27 1055581 148 35268 1011666 3.37 1046934 149 45827 1014532 4.32 1060359 150 40903 959385 4.09 1000288 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 34396 5104961 0.67 5139357 2 73139 4471736 1.61 4544875 3 30212 3872394 0.77 3902606 4 27698 4936751 0.56 4964449 5 30318 5117236 0.59 5147554 6 28429 5066458 0.56 5094887 7 28284 4474446 0.63 4502730 8 24948 4682159 0.53 4707107 9 24685 4806353 0.51 4831038 10 23263 4849569 0.48 4872832 11 22937 5073307 0.45 5096244 12 22520 5073076 0.44 5095596 13 22239 5061672 0.44 5083911 14 23426 5086737 0.46 5110163 15 25576 5082924 0.50 5108500 16 28316 5034333 0.56 5062649 17 32778 5032747 0.65 5065525 18 37384 5079193 0.73 5116577 19 42999 5074863 0.84 5117862 20 49456 5088450 0.96 5137906 21 55750 5108152 1.08 5163902 22 62116 5053304 1.21 5115420 23 67125 5039949 1.31 5107074 24 72355 5066604 1.41 5138959 25 76810 5065387 1.49 5142197 26 79776 5074158 1.55 5153934 27 82311 5099097 1.59 5181408 28 83589 5086452 1.62 5170041 29 84428 5103383 1.63 5187811 30 84513 5134388 1.62 5218901 31 78955 5095831 1.53 5174786 32 74576 5087694 1.44 5162270 33 69867 5104262 1.35 5174129 34 66071 5064592 1.29 5130663 35 62690 5062020 1.22 5124710 36 59539 5082722 1.16 5142261 37 57959 5060978 1.13 5118937 38 57873 5057731 1.13 5115604 39 58093 5079181 1.13 5137274 40 57509 5063230 1.12 5120739 41 56181 5050345 1.10 5106526 42 56273 5063686 1.10 5119959 43 55631 5026297 1.09 5081928 44 56222 5016535 1.11 5072757 45 55710 5026103 1.10 5081813 46 55388 5006921 1.09 5062309 47 55728 5000588 1.10 5056316 48 56342 5016937 1.11 5073279 49 56784 4989894 1.13 5046678 50 56717 4984242 1.13 5040959 51 57090 4995910 1.13 5053000 52 57311 4982097 1.14 5039408 53 56781 4961934 1.13 5018715 54 56968 4978902 1.13 5035870 55 56473 4961657 1.13 5018130 56 57065 4967520 1.14 5024585 57 57753 4977503 1.15 5035256 58 57718 4954948 1.15 5012666 59 58103 4942816 1.16 5000919 60 58570 4954739 1.17 5013309 61 58343 4920227 1.17 4978570 62 58286 4921513 1.17 4979799 63 59195 4923860 1.19 4983055 64 58491 4898402 1.18 4956893 65 58893 4887784 1.19 4946677 66 59307 4901188 1.20 4960495 67 58843 4877129 1.19 4935972 68 59509 4884380 1.20 4943889 69 60186 4885808 1.22 4945994 70 60221 4876063 1.22 4936284 71 59858 4867535 1.21 4927393 72 60887 4877299 1.23 4938186 73 60571 4855677 1.23 4916248 74 61252 4853333 1.25 4914585 75 61533 4853577 1.25 4915110 76 60969 4826356 1.25 4887325 77 61258 4817229 1.26 4878487 78 62366 4829898 1.27 4892264 79 62327 4801974 1.28 4864301 80 62678 4790576 1.29 4853254 81 63130 4799540 1.30 4862670 82 62762 4783826 1.29 4846588 83 63411 4772829 1.31 4836240 84 63957 4780765 1.32 4844722 85 63801 4748249 1.33 4812050 86 64610 4741515 1.34 4806125 87 65080 4753702 1.35 4818782 88 65389 4737927 1.36 4803316 89 66731 4731432 1.39 4798163 90 66725 4734068 1.39 4800793 91 67143 4704186 1.41 4771329 92 67955 4697201 1.43 4765156 93 69109 4697193 1.45 4766302 94 68721 4677975 1.45 4746696 95 70091 4666056 1.48 4736147 96 71460 4671789 1.51 4743249 97 72186 4647751 1.53 4719937 98 72283 4639605 1.53 4711888 99 73686 4644832 1.56 4718518 100 74049 4624885 1.58 4698934 101 75089 4620326 1.60 4695415 102 75683 4620973 1.61 4696656 103 77004 4594422 1.65 4671426 104 77494 4586123 1.66 4663617 105 79317 4589082 1.70 4668399 106 79617 4562381 1.72 4641998 107 81107 4551173 1.75 4632280 108 82396 4547711 1.78 4630107 109 83781 4529968 1.82 4613749 110 84589 4518226 1.84 4602815 111 86016 4511275 1.87 4597291 112 87117 4494393 1.90 4581510 113 88330 4473205 1.94 4561535 114 89252 4464335 1.96 4553587 115 90722 4449670 2.00 4540392 116 92365 4429898 2.04 4522263 117 94172 4429629 2.08 4523801 118 95349 4402428 2.12 4497777 119 97137 4386748 2.17 4483885 120 98577 4384758 2.20 4483335 121 99969 4361833 2.24 4461802 122 101691 4352237 2.28 4453928 123 103526 4356715 2.32 4460241 124 104735 4325963 2.36 4430698 125 105862 4309894 2.40 4415756 126 107207 4297534 2.43 4404741 127 108801 4262861 2.49 4371662 128 111004 4250016 2.55 4361020 129 112376 4237540 2.58 4349916 130 114211 4219794 2.64 4334005 131 116072 4205875 2.69 4321947 132 116541 4193874 2.70 4310415 133 118078 4167176 2.76 4285254 134 119455 4141541 2.80 4260996 135 121207 4128058 2.85 4249265 136 122440 4098457 2.90 4220897 137 123490 4076541 2.94 4200031 138 125629 4069303 2.99 4194932 139 126391 4036957 3.04 4163348 140 128193 4023704 3.09 4151897 141 129487 4009088 3.13 4138575 142 131374 3982706 3.19 4114080 143 133321 3963564 3.25 4096885 144 135778 3960398 3.31 4096176 145 138437 3940341 3.39 4078778 146 141814 3925950 3.49 4067764 147 148904 3916225 3.66 4065129 148 148418 3874565 3.69 4022983 149 143933 3824609 3.63 3968542 150 135110 3661300 3.56 3796410 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1422176 217247 86.75 1639423 2 492381 112750 81.37 605131 3 365805 171252 68.11 537057 4 419441 285251 59.52 704692 5 280631 322494 46.53 603125 6 212277 353343 37.53 565620 7 164949 439393 27.29 604342 8 145218 508233 22.22 653451 9 125804 563584 18.25 689388 10 108410 598466 15.34 706876 11 93982 631736 12.95 725718 12 85977 640031 11.84 726008 13 79474 638121 11.08 717595 14 74765 637757 10.49 712522 15 71203 635386 10.08 706589 16 68472 628525 9.82 696997 17 68507 625759 9.87 694266 18 67169 618105 9.80 685274 19 67342 615223 9.87 682565 20 66945 612091 9.86 679036 21 66927 610419 9.88 677346 22 66812 606444 9.92 673256 23 66576 605149 9.91 671725 24 65447 600446 9.83 665893 25 65042 598186 9.81 663228 26 64695 594456 9.81 659151 27 64029 591932 9.76 655961 28 63367 589905 9.70 653272 29 62792 584088 9.71 646880 30 62001 580165 9.65 642166 31 61590 576542 9.65 638132 32 60846 571090 9.63 631936 33 60707 568790 9.64 629497 34 60066 562401 9.65 622467 35 59216 557456 9.60 616672 36 58346 551925 9.56 610271 37 58362 548056 9.62 606418 38 57499 542268 9.59 599767 39 56819 537082 9.57 593901 40 56275 533603 9.54 589878 41 54985 526596 9.45 581581 42 54835 521700 9.51 576535 43 54221 516296 9.50 570517 44 53246 510502 9.45 563748 45 52833 504717 9.48 557550 46 52094 499288 9.45 551382 47 51351 494525 9.41 545876 48 51127 488635 9.47 539762 49 49932 484648 9.34 534580 50 49446 477979 9.37 527425 51 48963 471412 9.41 520375 52 48373 466913 9.39 515286 53 48119 461195 9.45 509314 54 46927 454409 9.36 501336 55 45936 449475 9.27 495411 56 46304 443769 9.45 490073 57 45044 438228 9.32 483272 58 44880 433743 9.38 478623 59 44014 425823 9.37 469837 60 43479 421707 9.35 465186 61 42956 415736 9.36 458692 62 42394 409799 9.38 452193 63 41301 405214 9.25 446515 64 40907 398260 9.31 439167 65 40200 393833 9.26 434033 66 39463 386944 9.25 426407 67 39198 382390 9.30 421588 68 38266 377847 9.20 416113 69 37733 371671 9.22 409404 70 36911 365706 9.17 402617 71 36955 361271 9.28 398226 72 36168 355703 9.23 391871 73 35262 349410 9.17 384672 74 34918 342626 9.25 377544 75 34389 338715 9.22 373104 76 33574 332796 9.16 366370 77 33170 326417 9.22 359587 78 33006 321803 9.30 354809 79 31981 316370 9.18 348351 80 31383 311423 9.15 342806 81 31122 306316 9.22 337438 82 30312 300595 9.16 330907 83 29871 294978 9.20 324849 84 29183 290697 9.12 319880 85 28554 285381 9.10 313935 86 28406 279263 9.23 307669 87 27610 275073 9.12 302683 88 27293 270996 9.15 298289 89 26819 266610 9.14 293429 90 26151 261216 9.10 287367 91 25757 256448 9.13 282205 92 25138 251078 9.10 276216 93 24859 246200 9.17 271059 94 24084 241986 9.05 266070 95 23887 236831 9.16 260718 96 23478 232688 9.17 256166 97 22801 228084 9.09 250885 98 22133 224215 8.98 246348 99 21840 218939 9.07 240779 100 21412 215706 9.03 237118 101 21088 210676 9.10 231764 102 20672 206808 9.09 227480 103 20340 203048 9.11 223388 104 19864 199348 9.06 219212 105 19330 193761 9.07 213091 106 18946 189000 9.11 207946 107 18654 185955 9.12 204609 108 18037 182215 9.01 200252 109 17839 178735 9.07 196574 110 17333 175168 9.00 192501 111 17017 171217 9.04 188234 112 16650 166975 9.07 183625 113 16316 164566 9.02 180882 114 15731 160152 8.94 175883 115 15370 156295 8.95 171665 116 15242 153498 9.03 168740 117 14505 150071 8.81 164576 118 14470 146873 8.97 161343 119 14119 143562 8.95 157681 120 13520 140394 8.78 153914 121 13580 136689 9.04 150269 122 13273 134355 8.99 147628 123 12918 130727 8.99 143645 124 12479 127709 8.90 140188 125 12318 124195 9.02 136513 126 11993 121733 8.97 133726 127 11648 118877 8.92 130525 128 11340 116358 8.88 127698 129 11242 114095 8.97 125337 130 10673 111277 8.75 121950 131 10556 108120 8.89 118676 132 10144 105910 8.74 116054 133 10099 104119 8.84 114218 134 9687 100782 8.77 110469 135 9402 98360 8.72 107762 136 9340 96271 8.84 105611 137 8856 93797 8.63 102653 138 8726 91534 8.70 100260 139 8582 89458 8.75 98040 140 8559 87623 8.90 96182 141 8267 85287 8.84 93554 142 7869 82734 8.69 90603 143 7667 80303 8.72 87970 144 7588 79410 8.72 86998 145 7161 76988 8.51 84149 146 7104 74719 8.68 81823 147 6965 73001 8.71 79966 148 6702 70570 8.67 77272 149 6408 64409 9.05 70817 150 5666 0 100.00 5666 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1653379 251902 86.78 1905281 2 1462751 366337 79.97 1829088 3 438375 202546 68.40 640921 4 425490 301917 58.49 727407 5 352731 449855 43.95 802586 6 231752 441924 34.40 673676 7 171650 494475 25.77 666125 8 118626 601030 16.48 719656 9 85107 699671 10.84 784778 10 58293 779596 6.96 837889 11 39715 843473 4.50 883188 12 26232 869070 2.93 895302 13 17946 871698 2.02 889644 14 12413 876279 1.40 888692 15 8723 879665 0.98 888388 16 6992 881678 0.79 888670 17 6634 876546 0.75 883180 18 5384 873825 0.61 879209 19 5654 859831 0.65 865485 20 5241 851931 0.61 857172 21 4899 846206 0.58 851105 22 5348 846686 0.63 852034 23 4622 841082 0.55 845704 24 4384 835152 0.52 839536 25 4322 833522 0.52 837844 26 4281 827942 0.51 832223 27 4147 824062 0.50 828209 28 4192 819538 0.51 823730 29 3854 816421 0.47 820275 30 3732 808154 0.46 811886 31 3669 803337 0.45 807006 32 3653 798016 0.46 801669 33 3599 790472 0.45 794071 34 3469 784909 0.44 788378 35 3410 777988 0.44 781398 36 3463 772393 0.45 775856 37 3251 766107 0.42 769358 38 3263 759033 0.43 762296 39 3285 751451 0.44 754736 40 3238 743264 0.43 746502 41 3172 737307 0.43 740479 42 3038 726449 0.42 729487 43 3085 719270 0.43 722355 44 3091 711233 0.43 714324 45 3055 704471 0.43 707526 46 3089 697587 0.44 700676 47 3062 689799 0.44 692861 48 2871 680608 0.42 683479 49 2912 674231 0.43 677143 50 2936 665440 0.44 668376 51 2789 657397 0.42 660186 52 2829 647142 0.44 649971 53 2677 640612 0.42 643289 54 2646 633909 0.42 636555 55 2651 623812 0.42 626463 56 2658 617139 0.43 619797 57 2547 609453 0.42 612000 58 2604 599347 0.43 601951 59 2493 594043 0.42 596536 60 2495 584301 0.43 586796 61 2515 576577 0.43 579092 62 2521 568166 0.44 570687 63 2411 560660 0.43 563071 64 2367 552905 0.43 555272 65 2285 544856 0.42 547141 66 2285 538027 0.42 540312 67 2326 527968 0.44 530294 68 2236 521635 0.43 523871 69 2285 513785 0.44 516070 70 2171 506643 0.43 508814 71 2115 497549 0.42 499664 72 2187 491099 0.44 493286 73 2063 482596 0.43 484659 74 2045 474474 0.43 476519 75 2033 466727 0.43 468760 76 1977 459073 0.43 461050 77 1939 452227 0.43 454166 78 1999 444771 0.45 446770 79 1867 438504 0.42 440371 80 1891 429874 0.44 431765 81 1837 423168 0.43 425005 82 1791 415705 0.43 417496 83 1858 407884 0.45 409742 84 1807 399893 0.45 401700 85 1706 394527 0.43 396233 86 1645 386952 0.42 388597 87 1679 380147 0.44 381826 88 1633 373761 0.44 375394 89 1552 366923 0.42 368475 90 1578 359496 0.44 361074 91 1494 353138 0.42 354632 92 1533 346225 0.44 347758 93 1471 341180 0.43 342651 94 1361 333979 0.41 335340 95 1401 326940 0.43 328341 96 1391 320839 0.43 322230 97 1306 313815 0.41 315121 98 1309 308470 0.42 309779 99 1251 302390 0.41 303641 100 1325 295668 0.45 296993 101 1283 291522 0.44 292805 102 1272 284519 0.45 285791 103 1191 279067 0.42 280258 104 1138 272549 0.42 273687 105 1206 268544 0.45 269750 106 1102 262395 0.42 263497 107 1127 255508 0.44 256635 108 1105 251394 0.44 252499 109 1057 245179 0.43 246236 110 1031 240577 0.43 241608 111 1066 235074 0.45 236140 112 999 230655 0.43 231654 113 1041 226686 0.46 227727 114 931 221811 0.42 222742 115 952 216157 0.44 217109 116 918 210686 0.43 211604 117 855 206955 0.41 207810 118 868 202510 0.43 203378 119 833 197449 0.42 198282 120 796 193177 0.41 193973 121 856 189496 0.45 190352 122 820 184638 0.44 185458 123 809 180788 0.45 181597 124 782 176636 0.44 177418 125 790 172104 0.46 172894 126 744 167954 0.44 168698 127 751 164281 0.46 165032 128 727 160399 0.45 161126 129 720 156927 0.46 157647 130 755 153864 0.49 154619 131 652 150171 0.43 150823 132 664 145546 0.45 146210 133 612 142750 0.43 143362 134 618 139414 0.44 140032 135 645 135840 0.47 136485 136 562 132361 0.42 132923 137 589 129487 0.45 130076 138 592 126523 0.47 127115 139 542 122983 0.44 123525 140 560 119689 0.47 120249 141 508 117305 0.43 117813 142 513 114660 0.45 115173 143 527 111663 0.47 112190 144 540 108896 0.49 109436 145 447 105829 0.42 106276 146 491 103083 0.47 103574 147 455 100738 0.45 101193 148 437 97272 0.45 97709 149 388 88952 0.43 89340 150 282 0 100.00 282 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4737084 719435 86.82 5456519 2 3927018 974432 80.12 4901450 3 3374128 1757773 65.75 5131901 4 2877909 2158845 57.14 5036754 5 1911194 2490370 43.42 4401564 6 1409162 2666885 34.57 4076047 7 1009418 2760677 26.77 3770095 8 721334 2801611 20.48 3522945 9 497224 2915660 14.57 3412884 10 334695 3034780 9.93 3369475 11 216382 3230879 6.28 3447261 12 140226 3317120 4.06 3457346 13 91181 3356090 2.65 3447271 14 59578 3378434 1.73 3438012 15 41188 3402794 1.20 3443982 16 30683 3420775 0.89 3451458 17 25680 3430867 0.74 3456547 18 22365 3429749 0.65 3452114 19 21071 3410243 0.61 3431314 20 20571 3382561 0.60 3403132 21 20276 3347467 0.60 3367743 22 20169 3322433 0.60 3342602 23 19926 3289113 0.60 3309039 24 18902 3259627 0.58 3278529 25 17845 3227723 0.55 3245568 26 17408 3196628 0.54 3214036 27 16702 3168523 0.52 3185225 28 16186 3141273 0.51 3157459 29 15844 3117839 0.51 3133683 30 15074 3082581 0.49 3097655 31 14531 3057358 0.47 3071889 32 14003 3029161 0.46 3043164 33 13729 2999146 0.46 3012875 34 13350 2967571 0.45 2980921 35 13015 2941754 0.44 2954769 36 12465 2916258 0.43 2928723 37 12534 2885808 0.43 2898342 38 12262 2859474 0.43 2871736 39 12111 2830847 0.43 2842958 40 12036 2805108 0.43 2817144 41 11827 2774360 0.42 2786187 42 11695 2743442 0.42 2755137 43 11635 2710339 0.43 2721974 44 11336 2683521 0.42 2694857 45 11111 2648863 0.42 2659974 46 11257 2616941 0.43 2628198 47 10885 2590395 0.42 2601280 48 10889 2560529 0.42 2571418 49 10707 2530591 0.42 2541298 50 10645 2498268 0.42 2508913 51 10482 2469129 0.42 2479611 52 10372 2437779 0.42 2448151 53 10154 2406324 0.42 2416478 54 9951 2375144 0.42 2385095 55 10077 2341462 0.43 2351539 56 9786 2313359 0.42 2323145 57 9470 2285062 0.41 2294532 58 9418 2250471 0.42 2259889 59 9512 2219202 0.43 2228714 60 9442 2192446 0.43 2201888 61 9192 2157993 0.42 2167185 62 8925 2130048 0.42 2138973 63 8949 2099092 0.42 2108041 64 8905 2070475 0.43 2079380 65 8671 2038299 0.42 2046970 66 8514 2009899 0.42 2018413 67 8498 1979166 0.43 1987664 68 8338 1951571 0.43 1959909 69 8133 1919689 0.42 1927822 70 7820 1893965 0.41 1901785 71 7958 1864737 0.42 1872695 72 7734 1832905 0.42 1840639 73 7872 1804338 0.43 1812210 74 7547 1775950 0.42 1783497 75 7425 1744848 0.42 1752273 76 7291 1717027 0.42 1724318 77 7325 1687055 0.43 1694380 78 7053 1658387 0.42 1665440 79 7001 1632332 0.43 1639333 80 6752 1606367 0.42 1613119 81 6877 1577909 0.43 1584786 82 6569 1551886 0.42 1558455 83 6514 1523064 0.43 1529578 84 6448 1496884 0.43 1503332 85 6246 1469143 0.42 1475389 86 6140 1444468 0.42 1450608 87 6122 1420059 0.43 1426181 88 6088 1392257 0.44 1398345 89 5797 1367775 0.42 1373572 90 5614 1342035 0.42 1347649 91 5536 1316694 0.42 1322230 92 5470 1292916 0.42 1298386 93 5460 1266097 0.43 1271557 94 5264 1243000 0.42 1248264 95 5233 1219728 0.43 1224961 96 5214 1193746 0.43 1198960 97 5188 1171874 0.44 1177062 98 4851 1148428 0.42 1153279 99 4700 1124992 0.42 1129692 100 4793 1100627 0.43 1105420 101 4608 1080452 0.42 1085060 102 4638 1058274 0.44 1062912 103 4403 1037291 0.42 1041694 104 4443 1016653 0.44 1021096 105 4217 993157 0.42 997374 106 4162 972894 0.43 977056 107 4156 952005 0.43 956161 108 4057 931828 0.43 935885 109 3842 911152 0.42 914994 110 3879 893312 0.43 897191 111 3676 873910 0.42 877586 112 3735 853860 0.44 857595 113 3636 835707 0.43 839343 114 3600 817037 0.44 820637 115 3500 798825 0.44 802325 116 3378 780393 0.43 783771 117 3353 763203 0.44 766556 118 3318 746973 0.44 750291 119 3235 728659 0.44 731894 120 3117 712667 0.44 715784 121 3042 697150 0.43 700192 122 3129 682037 0.46 685166 123 2776 663899 0.42 666675 124 2860 651254 0.44 654114 125 2758 635547 0.43 638305 126 2763 621351 0.44 624114 127 2741 606971 0.45 609712 128 2719 591615 0.46 594334 129 2565 578341 0.44 580906 130 2543 564614 0.45 567157 131 2442 551488 0.44 553930 132 2299 538006 0.43 540305 133 2370 524432 0.45 526802 134 2307 512119 0.45 514426 135 2199 500129 0.44 502328 136 2092 487799 0.43 489891 137 2206 475296 0.46 477502 138 2142 464038 0.46 466180 139 2102 452519 0.46 454621 140 2093 441238 0.47 443331 141 1900 430480 0.44 432380 142 1913 420723 0.45 422636 143 1889 410413 0.46 412302 144 1851 399353 0.46 401204 145 1781 389066 0.46 390847 146 1725 379987 0.45 381712 147 1748 368039 0.47 369787 148 1604 357972 0.45 359576 149 1385 327695 0.42 329080 150 950 0 100.00 950