SRR18245592.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 40574717 lines in total Total number of methylation call strings processed: 81149434 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1523133930 Total methylated C's in CpG context: 22841850 Total methylated C's in CHG context: 7286574 Total methylated C's in CHH context: 29785046 Total C to T conversions in CpG context: 196941857 Total C to T conversions in CHG context: 270054274 Total C to T conversions in CHH context: 996224329 C methylated in CpG context: 10.4% C methylated in non-CpG context: 2.8%