SRR18245591.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 39647964 lines in total Total number of methylation call strings processed: 79295928 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1586929112 Total methylated C's in CpG context: 24055018 Total methylated C's in CHG context: 6806896 Total methylated C's in CHH context: 28865043 Total C to T conversions in CpG context: 184663685 Total C to T conversions in CHG context: 269841582 Total C to T conversions in CHH context: 1072696888 C methylated in CpG context: 11.5% C methylated in non-CpG context: 2.6%