SRR18245590.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 44537830 lines in total Total number of methylation call strings processed: 89075660 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1388607534 Total methylated C's in CpG context: 22263063 Total methylated C's in CHG context: 7579368 Total methylated C's in CHH context: 32690711 Total C to T conversions in CpG context: 167815813 Total C to T conversions in CHG context: 238780213 Total C to T conversions in CHH context: 919478366 C methylated in CpG context: 11.7% C methylated in non-CpG context: 3.4%