SRR18245588.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 34503635 lines in total Total number of methylation call strings processed: 69007270 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1596107574 Total methylated C's in CpG context: 24795042 Total methylated C's in CHG context: 7044013 Total methylated C's in CHH context: 31608564 Total C to T conversions in CpG context: 172424647 Total C to T conversions in CHG context: 263421807 Total C to T conversions in CHH context: 1096813501 C methylated in CpG context: 12.6% C methylated in non-CpG context: 2.8%