SRR18245587.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 32891626 lines in total Total number of methylation call strings processed: 65783252 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1528385648 Total methylated C's in CpG context: 24055778 Total methylated C's in CHG context: 6835951 Total methylated C's in CHH context: 30650278 Total C to T conversions in CpG context: 165057703 Total C to T conversions in CHG context: 252187633 Total C to T conversions in CHH context: 1049598305 C methylated in CpG context: 12.7% C methylated in non-CpG context: 2.8%