SRR18245586.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 41418999 lines in total Total number of methylation call strings processed: 82837998 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1403155310 Total methylated C's in CpG context: 20496814 Total methylated C's in CHG context: 7260339 Total methylated C's in CHH context: 29667002 Total C to T conversions in CpG context: 185469553 Total C to T conversions in CHG context: 249313460 Total C to T conversions in CHH context: 910948142 C methylated in CpG context: 10.0% C methylated in non-CpG context: 3.1%