FastQCFastQC Report
Mon 26 Oct 2026
SRR18245584_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR18245584_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104914304
Total Bases15.7 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC28

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTA13649291.300994190458529TruSeq Adapter, Index 6 (97% over 36bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCGCGTA2772540.26426711080311793TruSeq Adapter, Index 6 (97% over 36bp)
TCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTATGC1121600.10690629944988245TruSeq Adapter, Index 6 (97% over 34bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)