SRR18245584.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 46858841 lines in total Total number of methylation call strings processed: 93717682 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1358735426 Total methylated C's in CpG context: 21899705 Total methylated C's in CHG context: 8145278 Total methylated C's in CHH context: 35008754 Total C to T conversions in CpG context: 169631260 Total C to T conversions in CHG context: 235902058 Total C to T conversions in CHH context: 888148371 C methylated in CpG context: 11.4% C methylated in non-CpG context: 3.7%