CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 49418 973650 4.83 1023068 2 145384 1199485 10.81 1344869 3 106444 744048 12.52 850492 4 97030 1049044 8.47 1146074 5 113076 1004716 10.12 1117792 6 134643 1281198 9.51 1415841 7 123371 1025150 10.74 1148521 8 114597 998407 10.30 1113004 9 106906 977666 9.86 1084572 10 103560 933443 9.99 1037003 11 99574 960263 9.40 1059837 12 96852 906740 9.65 1003592 13 97035 909314 9.64 1006349 14 99748 941215 9.58 1040963 15 99252 957195 9.39 1056447 16 100778 975111 9.37 1075889 17 102804 986651 9.44 1089455 18 105962 1007267 9.52 1113229 19 105101 996213 9.54 1101314 20 106230 1002773 9.58 1109003 21 106039 999459 9.59 1105498 22 106134 994053 9.65 1100187 23 106848 988197 9.76 1095045 24 108846 993420 9.87 1102266 25 105698 978992 9.74 1084690 26 106781 974035 9.88 1080816 27 106889 980524 9.83 1087413 28 107467 981650 9.87 1089117 29 108116 977298 9.96 1085414 30 109547 982832 10.03 1092379 31 108455 973118 10.03 1081573 32 107876 972980 9.98 1080856 33 108385 978632 9.97 1087017 34 107293 964066 10.01 1071359 35 107916 964854 10.06 1072770 36 107316 972593 9.94 1079909 37 105346 959885 9.89 1065231 38 106629 961374 9.98 1068003 39 107796 971266 9.99 1079062 40 106431 961189 9.97 1067620 41 105931 961778 9.92 1067709 42 107183 971211 9.94 1078394 43 106385 953916 10.03 1060301 44 106459 952850 10.05 1059309 45 106477 953878 10.04 1060355 46 105621 949338 10.01 1054959 47 105478 948578 10.01 1054056 48 106090 959664 9.95 1065754 49 105442 949718 9.99 1055160 50 105092 947568 9.98 1052660 51 106456 949613 10.08 1056069 52 105218 942109 10.05 1047327 53 104721 939471 10.03 1044192 54 104461 943930 9.96 1048391 55 104112 931941 10.05 1036053 56 103784 932791 10.01 1036575 57 104582 937417 10.04 1041999 58 103104 927057 10.01 1030161 59 103186 925642 10.03 1028828 60 103864 931328 10.03 1035192 61 103226 921769 10.07 1024995 62 103310 925254 10.04 1028564 63 103241 926639 10.02 1029880 64 102763 923197 10.02 1025960 65 101708 916899 9.99 1018607 66 102110 919183 10.00 1021293 67 101551 907533 10.06 1009084 68 101323 911642 10.00 1012965 69 101995 912719 10.05 1014714 70 101039 905741 10.04 1006780 71 101820 905352 10.11 1007172 72 100970 910343 9.98 1011313 73 100902 901059 10.07 1001961 74 101687 903623 10.11 1005310 75 100991 905607 10.03 1006598 76 100445 900164 10.04 1000609 77 100504 899054 10.05 999558 78 100303 896634 10.06 996937 79 99687 889333 10.08 989020 80 99294 888887 10.05 988181 81 99759 889930 10.08 989689 82 98989 885290 10.06 984279 83 98987 884671 10.06 983658 84 99380 886043 10.09 985423 85 98761 881606 10.07 980367 86 98166 877837 10.06 976003 87 97944 878177 10.03 976121 88 98239 869828 10.15 968067 89 97825 866716 10.14 964541 90 97950 870641 10.11 968591 91 96960 864355 10.09 961315 92 96712 862321 10.08 959033 93 97314 864397 10.12 961711 94 96744 857071 10.14 953815 95 97274 855681 10.21 952955 96 96960 859913 10.13 956873 97 96907 854592 10.18 951499 98 97531 852261 10.27 949792 99 96423 849976 10.19 946399 100 95690 845349 10.17 941039 101 96032 839087 10.27 935119 102 96342 839838 10.29 936180 103 95115 832982 10.25 928097 104 95458 831628 10.30 927086 105 95582 834942 10.27 930524 106 95565 828678 10.34 924243 107 94877 822457 10.34 917334 108 94620 824275 10.30 918895 109 94155 815945 10.35 910100 110 94761 813147 10.44 907908 111 95074 813542 10.46 908616 112 94264 809339 10.43 903603 113 93986 807297 10.43 901283 114 94804 806115 10.52 900919 115 94043 797573 10.55 891616 116 93737 798044 10.51 891781 117 94483 794771 10.62 889254 118 93994 790273 10.63 884267 119 93780 785127 10.67 878907 120 93931 785114 10.69 879045 121 93152 777672 10.70 870824 122 92568 774938 10.67 867506 123 92998 771803 10.75 864801 124 92925 767341 10.80 860266 125 92503 762450 10.82 854953 126 92953 761634 10.88 854587 127 93696 753418 11.06 847114 128 92668 751495 10.98 844163 129 92413 748858 10.98 841271 130 92047 740881 11.05 832928 131 91789 738757 11.05 830546 132 92005 735887 11.11 827892 133 91709 728743 11.18 820452 134 91404 727765 11.16 819169 135 91562 725044 11.21 816606 136 92051 716803 11.38 808854 137 90776 713641 11.28 804417 138 90694 708405 11.35 799099 139 90818 702185 11.45 793003 140 90320 695996 11.49 786316 141 89367 692048 11.44 781415 142 89538 683709 11.58 773247 143 89301 682532 11.57 771833 144 90043 679240 11.70 769283 145 89057 671644 11.71 760701 146 89866 666416 11.88 756282 147 91344 667088 12.04 758432 148 88615 656394 11.89 745009 149 89536 650407 12.10 739943 150 95581 626788 13.23 722369 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 25451 1986737 1.26 2012188 2 21098 1383559 1.50 1404657 3 10660 1143179 0.92 1153839 4 9101 1409358 0.64 1418459 5 12225 1724376 0.70 1736601 6 11478 1580870 0.72 1592348 7 9751 1329244 0.73 1338995 8 8260 1333073 0.62 1341333 9 7830 1308181 0.59 1316011 10 7798 1298678 0.60 1306476 11 7845 1327617 0.59 1335462 12 7233 1337539 0.54 1344772 13 6823 1334555 0.51 1341378 14 6955 1341540 0.52 1348495 15 7075 1365860 0.52 1372935 16 7178 1382652 0.52 1389830 17 7398 1403403 0.52 1410801 18 7354 1398320 0.52 1405674 19 7745 1395190 0.55 1402935 20 8406 1399686 0.60 1408092 21 9186 1406667 0.65 1415853 22 9959 1392010 0.71 1401969 23 10885 1382888 0.78 1393773 24 11516 1372899 0.83 1384415 25 12377 1368397 0.90 1380774 26 13132 1368706 0.95 1381838 27 14131 1378494 1.01 1392625 28 15042 1372414 1.08 1387456 29 17129 1373674 1.23 1390803 30 18044 1381244 1.29 1399288 31 17645 1370896 1.27 1388541 32 17662 1374317 1.27 1391979 33 17383 1370532 1.25 1387915 34 17082 1363591 1.24 1380673 35 16774 1361450 1.22 1378224 36 16320 1365990 1.18 1382310 37 16328 1361066 1.19 1377394 38 16588 1368451 1.20 1385039 39 17092 1366409 1.24 1383501 40 17402 1360821 1.26 1378223 41 17201 1354975 1.25 1372176 42 17219 1357605 1.25 1374824 43 17193 1345918 1.26 1363111 44 17499 1344421 1.28 1361920 45 17640 1342407 1.30 1360047 46 17458 1334281 1.29 1351739 47 17354 1335949 1.28 1353303 48 18007 1340957 1.33 1358964 49 18292 1335471 1.35 1353763 50 18800 1328385 1.40 1347185 51 18692 1333127 1.38 1351819 52 18472 1324898 1.38 1343370 53 18508 1327178 1.38 1345686 54 18824 1326613 1.40 1345437 55 18760 1315811 1.41 1334571 56 18916 1311720 1.42 1330636 57 18660 1311294 1.40 1329954 58 18939 1310278 1.42 1329217 59 19306 1308284 1.45 1327590 60 19477 1312044 1.46 1331521 61 19394 1312121 1.46 1331515 62 19633 1303594 1.48 1323227 63 19663 1309305 1.48 1328968 64 19701 1295424 1.50 1315125 65 19722 1289922 1.51 1309644 66 19637 1289945 1.50 1309582 67 19652 1282764 1.51 1302416 68 19827 1280210 1.53 1300037 69 19784 1283051 1.52 1302835 70 20121 1276023 1.55 1296144 71 19847 1270902 1.54 1290749 72 20428 1273790 1.58 1294218 73 20459 1263973 1.59 1284432 74 20187 1266391 1.57 1286578 75 20278 1267195 1.58 1287473 76 20329 1262245 1.59 1282574 77 20355 1253388 1.60 1273743 78 20559 1258620 1.61 1279179 79 20432 1249942 1.61 1270374 80 20898 1245311 1.65 1266209 81 20672 1247744 1.63 1268416 82 20547 1240088 1.63 1260635 83 20570 1236082 1.64 1256652 84 21102 1241638 1.67 1262740 85 21290 1234499 1.70 1255789 86 21156 1227319 1.69 1248475 87 21254 1225923 1.70 1247177 88 21089 1218988 1.70 1240077 89 21594 1217261 1.74 1238855 90 21600 1219739 1.74 1241339 91 21863 1207994 1.78 1229857 92 21774 1203675 1.78 1225449 93 22027 1207878 1.79 1229905 94 22364 1205504 1.82 1227868 95 22369 1199594 1.83 1221963 96 22488 1199269 1.84 1221757 97 22571 1188527 1.86 1211098 98 22838 1182986 1.89 1205824 99 23170 1184866 1.92 1208036 100 23297 1177154 1.94 1200451 101 23475 1172072 1.96 1195547 102 23720 1170056 1.99 1193776 103 23751 1162171 2.00 1185922 104 24125 1161558 2.03 1185683 105 24290 1161098 2.05 1185388 106 24522 1152182 2.08 1176704 107 24964 1143088 2.14 1168052 108 25009 1148041 2.13 1173050 109 25686 1139758 2.20 1165444 110 25878 1136583 2.23 1162461 111 26261 1134403 2.26 1160664 112 26679 1129161 2.31 1155840 113 26761 1120492 2.33 1147253 114 27241 1118122 2.38 1145363 115 27226 1107626 2.40 1134852 116 27701 1106088 2.44 1133789 117 28414 1106096 2.50 1134510 118 28597 1096322 2.54 1124919 119 29140 1093213 2.60 1122353 120 29724 1092597 2.65 1122321 121 29601 1078569 2.67 1108170 122 30355 1073160 2.75 1103515 123 30687 1072810 2.78 1103497 124 31448 1064378 2.87 1095826 125 31537 1060863 2.89 1092400 126 32258 1058432 2.96 1090690 127 32437 1046950 3.01 1079387 128 32846 1040834 3.06 1073680 129 33868 1034462 3.17 1068330 130 33959 1027114 3.20 1061073 131 34588 1021634 3.27 1056222 132 34834 1019294 3.30 1054128 133 34902 1008299 3.35 1043201 134 35445 1002200 3.42 1037645 135 36061 995440 3.50 1031501 136 36336 986698 3.55 1023034 137 36601 978120 3.61 1014721 138 36912 975121 3.65 1012033 139 37434 966776 3.73 1004210 140 37710 959250 3.78 996960 141 37900 953670 3.82 991570 142 38259 945770 3.89 984029 143 38966 937399 3.99 976365 144 39913 934908 4.09 974821 145 40438 927379 4.18 967817 146 42185 922764 4.37 964949 147 42728 918003 4.45 960731 148 43841 907144 4.61 950985 149 57248 911750 5.91 968998 150 51505 852262 5.70 903767 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 42346 5202892 0.81 5245238 2 90604 4698755 1.89 4789359 3 38483 3977722 0.96 4016205 4 34678 5073078 0.68 5107756 5 38045 5234748 0.72 5272793 6 34978 5194033 0.67 5229011 7 34398 4546522 0.75 4580920 8 30239 4773498 0.63 4803737 9 30096 4920207 0.61 4950303 10 28083 4945873 0.56 4973956 11 27854 5169248 0.54 5197102 12 26943 5167022 0.52 5193965 13 26633 5156712 0.51 5183345 14 27983 5188604 0.54 5216587 15 31076 5185646 0.60 5216722 16 35299 5135917 0.68 5171216 17 41888 5129606 0.81 5171494 18 49553 5178843 0.95 5228396 19 58068 5172570 1.11 5230638 20 68143 5185565 1.30 5253708 21 79025 5208133 1.49 5287158 22 88406 5148626 1.69 5237032 23 96780 5129372 1.85 5226152 24 105679 5167770 2.00 5273449 25 112548 5158085 2.14 5270633 26 118249 5166717 2.24 5284966 27 122316 5192487 2.30 5314803 28 124134 5173135 2.34 5297269 29 125138 5183088 2.36 5308226 30 124354 5219274 2.33 5343628 31 115960 5175137 2.19 5291097 32 108696 5160725 2.06 5269421 33 101235 5176035 1.92 5277270 34 95526 5123319 1.83 5218845 35 89475 5121717 1.72 5211192 36 85850 5138477 1.64 5224327 37 83212 5113375 1.60 5196587 38 82073 5111818 1.58 5193891 39 82565 5130988 1.58 5213553 40 82283 5103230 1.59 5185513 41 80260 5089406 1.55 5169666 42 80562 5105644 1.55 5186206 43 79102 5062601 1.54 5141703 44 79691 5046427 1.55 5126118 45 80078 5057415 1.56 5137493 46 79219 5034444 1.55 5113663 47 79314 5025649 1.55 5104963 48 80269 5039023 1.57 5119292 49 81653 5003072 1.61 5084725 50 81517 4994993 1.61 5076510 51 82190 5009211 1.61 5091401 52 80961 4987709 1.60 5068670 53 81634 4965215 1.62 5046849 54 81939 4975113 1.62 5057052 55 81757 4948335 1.63 5030092 56 81342 4956699 1.61 5038041 57 82531 4966108 1.63 5048639 58 82811 4937737 1.65 5020548 59 83180 4923149 1.66 5006329 60 83614 4932645 1.67 5016259 61 83388 4890344 1.68 4973732 62 83876 4889639 1.69 4973515 63 84161 4887455 1.69 4971616 64 83266 4861094 1.68 4944360 65 83773 4838015 1.70 4921788 66 84360 4849301 1.71 4933661 67 83605 4824865 1.70 4908470 68 84507 4823001 1.72 4907508 69 84963 4827464 1.73 4912427 70 85372 4812969 1.74 4898341 71 85046 4804710 1.74 4889756 72 86129 4809117 1.76 4895246 73 85208 4776579 1.75 4861787 74 86406 4775798 1.78 4862204 75 86270 4767909 1.78 4854179 76 86285 4741796 1.79 4828081 77 86062 4727579 1.79 4813641 78 87080 4736077 1.81 4823157 79 87128 4703049 1.82 4790177 80 86821 4692531 1.82 4779352 81 87370 4694288 1.83 4781658 82 87045 4669163 1.83 4756208 83 87791 4653953 1.85 4741744 84 88620 4668092 1.86 4756712 85 88631 4622847 1.88 4711478 86 88742 4613635 1.89 4702377 87 89411 4625807 1.90 4715218 88 89728 4599580 1.91 4689308 89 90643 4595255 1.93 4685898 90 92166 4594000 1.97 4686166 91 91785 4558591 1.97 4650376 92 91900 4546830 1.98 4638730 93 93088 4549965 2.00 4643053 94 93387 4519194 2.02 4612581 95 94165 4508025 2.05 4602190 96 95548 4508820 2.08 4604368 97 96334 4477707 2.11 4574041 98 96703 4471957 2.12 4568660 99 97025 4468794 2.13 4565819 100 98677 4450322 2.17 4548999 101 99272 4438307 2.19 4537579 102 100226 4436926 2.21 4537152 103 101033 4401350 2.24 4502383 104 102355 4387596 2.28 4489951 105 103646 4389917 2.31 4493563 106 104528 4357831 2.34 4462359 107 106142 4339539 2.39 4445681 108 107047 4339477 2.41 4446524 109 108668 4315608 2.46 4424276 110 110125 4299176 2.50 4409301 111 111425 4289807 2.53 4401232 112 112687 4264067 2.57 4376754 113 114193 4242370 2.62 4356563 114 115510 4231653 2.66 4347163 115 116563 4208417 2.70 4324980 116 118378 4185072 2.75 4303450 117 120234 4181168 2.80 4301402 118 122148 4151888 2.86 4274036 119 123224 4133993 2.89 4257217 120 125275 4126582 2.95 4251857 121 127245 4097293 3.01 4224538 122 129074 4077698 3.07 4206772 123 131820 4079030 3.13 4210850 124 133456 4043394 3.20 4176850 125 134741 4021624 3.24 4156365 126 136746 4007509 3.30 4144255 127 138587 3969978 3.37 4108565 128 140563 3950958 3.44 4091521 129 142437 3930286 3.50 4072723 130 144196 3907831 3.56 4052027 131 146140 3887064 3.62 4033204 132 147515 3869281 3.67 4016796 133 149943 3839409 3.76 3989352 134 151255 3810558 3.82 3961813 135 153831 3791568 3.90 3945399 136 154695 3753840 3.96 3908535 137 155972 3728296 4.02 3884268 138 158017 3715764 4.08 3873781 139 159429 3679425 4.15 3838854 140 161464 3659456 4.23 3820920 141 161705 3636149 4.26 3797854 142 164865 3611704 4.37 3776569 143 167327 3586700 4.46 3754027 144 170041 3579318 4.54 3749359 145 173075 3547665 4.65 3720740 146 177233 3530555 4.78 3707788 147 185761 3518655 5.01 3704416 148 184684 3474545 5.05 3659229 149 178831 3413651 4.98 3592482 150 172573 3240152 5.06 3412725 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1289396 196484 86.78 1485880 2 445336 99419 81.75 544755 3 332288 152813 68.50 485101 4 380065 259492 59.43 639557 5 256108 292127 46.72 548235 6 194238 320698 37.72 514936 7 149608 394539 27.49 544147 8 130919 455999 22.31 586918 9 112088 502118 18.25 614206 10 95806 531110 15.28 626916 11 82992 561631 12.87 644623 12 74477 565902 11.63 640379 13 68127 563477 10.79 631604 14 64453 561781 10.29 626234 15 60100 557441 9.73 617541 16 58383 554359 9.53 612742 17 57949 547937 9.56 605886 18 56476 543260 9.42 599736 19 56243 537011 9.48 593254 20 56124 530381 9.57 586505 21 55799 528272 9.55 584071 22 55269 524004 9.54 579273 23 54649 519347 9.52 573996 24 53827 515916 9.45 569743 25 53622 510670 9.50 564292 26 53209 507515 9.49 560724 27 51978 503832 9.35 555810 28 51788 499871 9.39 551659 29 50367 495455 9.23 545822 30 50104 489207 9.29 539311 31 49697 485001 9.29 534698 32 48885 479927 9.24 528812 33 48114 473589 9.22 521703 34 47567 468381 9.22 515948 35 47201 462413 9.26 509614 36 46480 457746 9.22 504226 37 46037 452578 9.23 498615 38 44885 446320 9.14 491205 39 44375 439583 9.17 483958 40 43918 434608 9.18 478526 41 42924 428514 9.10 471438 42 42340 420928 9.14 463268 43 41560 415186 9.10 456746 44 40963 409822 9.09 450785 45 40460 405046 9.08 445506 46 39604 397278 9.07 436882 47 39367 392933 9.11 432300 48 37993 386498 8.95 424491 49 37554 381631 8.96 419185 50 37448 374627 9.09 412075 51 36551 369169 9.01 405720 52 36054 362868 9.04 398922 53 35090 356942 8.95 392032 54 34172 351101 8.87 385273 55 33830 345531 8.92 379361 56 33129 338673 8.91 371802 57 32812 333867 8.95 366679 58 32121 328134 8.92 360255 59 31549 322699 8.91 354248 60 31081 317088 8.93 348169 61 30364 309842 8.93 340206 62 29606 305387 8.84 334993 63 29141 299473 8.87 328614 64 28688 293743 8.90 322431 65 28141 289635 8.86 317776 66 27640 284029 8.87 311669 67 27100 278470 8.87 305570 68 26540 273189 8.85 299729 69 25847 266867 8.83 292714 70 25381 261564 8.85 286945 71 25038 257299 8.87 282337 72 24108 251573 8.74 275681 73 24041 247173 8.86 271214 74 23442 242266 8.82 265708 75 22968 235810 8.88 258778 76 22449 232181 8.82 254630 77 21876 226467 8.81 248343 78 21403 221859 8.80 243262 79 20852 216792 8.77 237644 80 20560 212712 8.81 233272 81 20232 208938 8.83 229170 82 19558 203775 8.76 223333 83 18885 200111 8.62 218996 84 18810 194872 8.80 213682 85 18201 190383 8.73 208584 86 17730 186848 8.67 204578 87 17399 182641 8.70 200040 88 16970 177566 8.72 194536 89 16490 173747 8.67 190237 90 16118 169957 8.66 186075 91 15755 165666 8.68 181421 92 15483 162349 8.71 177832 93 14899 158444 8.60 173343 94 14605 154179 8.65 168784 95 14288 150878 8.65 165166 96 13820 147752 8.55 161572 97 13623 143760 8.66 157383 98 13332 140616 8.66 153948 99 13135 136666 8.77 149801 100 12727 133219 8.72 145946 101 12397 130297 8.69 142694 102 12019 127141 8.64 139160 103 11501 123808 8.50 135309 104 11542 121344 8.69 132886 105 11078 118061 8.58 129139 106 10797 114691 8.60 125488 107 10531 112055 8.59 122586 108 10321 108790 8.67 119111 109 10059 106172 8.65 116231 110 9654 103822 8.51 113476 111 9382 100774 8.52 110156 112 9098 98898 8.42 107996 113 8892 95977 8.48 104869 114 8780 93513 8.58 102293 115 8476 90661 8.55 99137 116 8174 89036 8.41 97210 117 7958 86020 8.47 93978 118 7798 84519 8.45 92317 119 7600 81989 8.48 89589 120 7342 79756 8.43 87098 121 7148 77620 8.43 84768 122 7131 75737 8.61 82868 123 6737 73243 8.42 79980 124 6495 71385 8.34 77880 125 6353 69053 8.43 75406 126 6166 67009 8.43 73175 127 5992 65511 8.38 71503 128 5797 64365 8.26 70162 129 5658 62387 8.32 68045 130 5521 61020 8.30 66541 131 5226 59163 8.12 64389 132 5179 57390 8.28 62569 133 5153 55876 8.44 61029 134 5061 54774 8.46 59835 135 4726 52717 8.23 57443 136 4728 51076 8.47 55804 137 4523 49966 8.30 54489 138 4400 48302 8.35 52702 139 4305 47033 8.39 51338 140 4038 45708 8.12 49746 141 3930 44610 8.10 48540 142 3919 43656 8.24 47575 143 3777 42397 8.18 46174 144 3612 41311 8.04 44923 145 3485 39788 8.05 43273 146 3513 38557 8.35 42070 147 3367 38046 8.13 41413 148 3236 36384 8.17 39620 149 3031 33198 8.37 36229 150 2800 0 100.00 2800 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1485673 227338 86.73 1713011 2 1313332 325288 80.15 1638620 3 392770 178985 68.70 571755 4 379015 268369 58.55 647384 5 312448 397348 44.02 709796 6 206006 390824 34.52 596830 7 153301 434216 26.09 587517 8 105750 524691 16.77 630441 9 75782 612800 11.01 688582 10 52477 677224 7.19 729701 11 35569 733187 4.63 768756 12 24105 754442 3.10 778547 13 16305 758535 2.10 774840 14 11404 761444 1.48 772848 15 8555 761262 1.11 769817 16 6765 761106 0.88 767871 17 6438 757700 0.84 764138 18 5307 751276 0.70 756583 19 5392 737776 0.73 743168 20 5062 727492 0.69 732554 21 4741 721298 0.65 726039 22 5102 718596 0.70 723698 23 4469 712289 0.62 716758 24 4161 705827 0.59 709988 25 4223 700449 0.60 704672 26 4021 693373 0.58 697394 27 3891 689110 0.56 693001 28 3933 682529 0.57 686462 29 3554 676835 0.52 680389 30 3501 669924 0.52 673425 31 3327 663794 0.50 667121 32 3350 656778 0.51 660128 33 3217 649457 0.49 652674 34 3178 640521 0.49 643699 35 3247 634676 0.51 637923 36 3067 627704 0.49 630771 37 3104 618088 0.50 621192 38 3158 611717 0.51 614875 39 3067 603187 0.51 606254 40 2988 595623 0.50 598611 41 2941 586610 0.50 589551 42 2962 578665 0.51 581627 43 2896 569082 0.51 571978 44 2789 559763 0.50 562552 45 2812 553137 0.51 555949 46 2654 542872 0.49 545526 47 2601 536249 0.48 538850 48 2669 527931 0.50 530600 49 2625 519355 0.50 521980 50 2542 511719 0.49 514261 51 2433 503408 0.48 505841 52 2553 495132 0.51 497685 53 2421 487112 0.49 489533 54 2405 476730 0.50 479135 55 2367 469816 0.50 472183 56 2335 462893 0.50 465228 57 2212 452341 0.49 454553 58 2140 446445 0.48 448585 59 2258 437744 0.51 440002 60 2246 430056 0.52 432302 61 2133 422489 0.50 424622 62 1979 415073 0.47 417052 63 1982 406797 0.48 408779 64 1959 400206 0.49 402165 65 1917 392324 0.49 394241 66 1964 384451 0.51 386415 67 1879 377549 0.50 379428 68 1842 370215 0.50 372057 69 1825 362911 0.50 364736 70 1704 354801 0.48 356505 71 1761 347540 0.50 349301 72 1710 341833 0.50 343543 73 1691 335333 0.50 337024 74 1696 327178 0.52 328874 75 1611 321000 0.50 322611 76 1614 314002 0.51 315616 77 1507 307216 0.49 308723 78 1480 301352 0.49 302832 79 1418 295112 0.48 296530 80 1457 288453 0.50 289910 81 1367 282423 0.48 283790 82 1445 277163 0.52 278608 83 1354 270437 0.50 271791 84 1300 263651 0.49 264951 85 1198 258464 0.46 259662 86 1208 251008 0.48 252216 87 1213 247034 0.49 248247 88 1171 240856 0.48 242027 89 1180 235592 0.50 236772 90 1135 229899 0.49 231034 91 1140 223104 0.51 224244 92 1140 218770 0.52 219910 93 1064 214285 0.49 215349 94 1053 209910 0.50 210963 95 955 203457 0.47 204412 96 997 199239 0.50 200236 97 974 194812 0.50 195786 98 902 189995 0.47 190897 99 905 184375 0.49 185280 100 919 180767 0.51 181686 101 883 176686 0.50 177569 102 887 172226 0.51 173113 103 812 167335 0.48 168147 104 805 163686 0.49 164491 105 746 158979 0.47 159725 106 763 155146 0.49 155909 107 777 151359 0.51 152136 108 715 147834 0.48 148549 109 725 143662 0.50 144387 110 706 140235 0.50 140941 111 639 136214 0.47 136853 112 666 132946 0.50 133612 113 658 130036 0.50 130694 114 638 126919 0.50 127557 115 641 122667 0.52 123308 116 627 119357 0.52 119984 117 598 116626 0.51 117224 118 566 114153 0.49 114719 119 577 110311 0.52 110888 120 557 107816 0.51 108373 121 488 104969 0.46 105457 122 518 102304 0.50 102822 123 499 99437 0.50 99936 124 438 97162 0.45 97600 125 461 93120 0.49 93581 126 456 91831 0.49 92287 127 485 89596 0.54 90081 128 438 86669 0.50 87107 129 432 84528 0.51 84960 130 387 82145 0.47 82532 131 420 80663 0.52 81083 132 425 78363 0.54 78788 133 379 75507 0.50 75886 134 387 73443 0.52 73830 135 346 71389 0.48 71735 136 340 69863 0.48 70203 137 366 67781 0.54 68147 138 323 65559 0.49 65882 139 319 63992 0.50 64311 140 319 62248 0.51 62567 141 307 60620 0.50 60927 142 311 58806 0.53 59117 143 294 57829 0.51 58123 144 289 55915 0.51 56204 145 264 54171 0.48 54435 146 266 53092 0.50 53358 147 273 51239 0.53 51512 148 247 49576 0.50 49823 149 212 45661 0.46 45873 150 173 0 100.00 173 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4267115 648199 86.81 4915314 2 3529887 862869 80.36 4392756 3 3041393 1557964 66.13 4599357 4 2587546 1917834 57.43 4505380 5 1721566 2215839 43.72 3937405 6 1274759 2372900 34.95 3647659 7 913744 2449311 27.17 3363055 8 654221 2477635 20.89 3131856 9 452160 2568911 14.97 3021071 10 306326 2653460 10.35 2959786 11 198625 2821043 6.58 3019668 12 128571 2882030 4.27 3010601 13 85778 2910048 2.86 2995826 14 56524 2927796 1.89 2984320 15 39572 2940117 1.33 2979689 16 30364 2950938 1.02 2981302 17 25388 2950394 0.85 2975782 18 22423 2940825 0.76 2963248 19 21053 2919087 0.72 2940140 20 20173 2885613 0.69 2905786 21 19547 2846504 0.68 2866051 22 19367 2814922 0.68 2834289 23 18960 2779773 0.68 2798733 24 18305 2744674 0.66 2762979 25 17360 2706057 0.64 2723417 26 16760 2672741 0.62 2689501 27 16044 2636812 0.60 2652856 28 15452 2604034 0.59 2619486 29 14887 2575004 0.57 2589891 30 14329 2543213 0.56 2557542 31 13728 2510369 0.54 2524097 32 13273 2481736 0.53 2495009 33 12940 2444261 0.53 2457201 34 12542 2411686 0.52 2424228 35 12359 2381305 0.52 2393664 36 11990 2350533 0.51 2362523 37 11684 2318332 0.50 2330016 38 11388 2288434 0.50 2299822 39 11418 2258017 0.50 2269435 40 10973 2225818 0.49 2236791 41 10921 2195406 0.49 2206327 42 10929 2162857 0.50 2173786 43 10629 2130898 0.50 2141527 44 10567 2096114 0.50 2106681 45 10565 2064200 0.51 2074765 46 10132 2032831 0.50 2042963 47 10013 2001507 0.50 2011520 48 9728 1970562 0.49 1980290 49 9804 1940169 0.50 1949973 50 9398 1909671 0.49 1919069 51 9191 1878524 0.49 1887715 52 9319 1845211 0.50 1854530 53 9069 1815229 0.50 1824298 54 8869 1781656 0.50 1790525 55 8824 1751277 0.50 1760101 56 8663 1723321 0.50 1731984 57 8390 1692528 0.49 1700918 58 8334 1660443 0.50 1668777 59 8137 1632686 0.50 1640823 60 8022 1602111 0.50 1610133 61 7875 1570932 0.50 1578807 62 7573 1544774 0.49 1552347 63 7603 1514312 0.50 1521915 64 7576 1485939 0.51 1493515 65 7307 1459787 0.50 1467094 66 6971 1430916 0.48 1437887 67 7080 1402177 0.50 1409257 68 6885 1374886 0.50 1381771 69 6724 1346622 0.50 1353346 70 6456 1323668 0.49 1330124 71 6572 1294582 0.51 1301154 72 6432 1268723 0.50 1275155 73 6162 1243632 0.49 1249794 74 6061 1219397 0.49 1225458 75 5878 1191120 0.49 1196998 76 5706 1165106 0.49 1170812 77 5845 1142453 0.51 1148298 78 5535 1118583 0.49 1124118 79 5422 1094204 0.49 1099626 80 5227 1068764 0.49 1073991 81 5262 1046438 0.50 1051700 82 5053 1022403 0.49 1027456 83 4868 1001921 0.48 1006789 84 4959 978378 0.50 983337 85 4761 956744 0.50 961505 86 4855 936542 0.52 941397 87 4673 913576 0.51 918249 88 4432 892371 0.49 896803 89 4179 871861 0.48 876040 90 4339 852732 0.51 857071 91 4087 834142 0.49 838229 92 4102 815574 0.50 819676 93 3991 793553 0.50 797544 94 3908 774103 0.50 778011 95 3749 754824 0.49 758573 96 3853 738393 0.52 742246 97 3596 718622 0.50 722218 98 3514 701656 0.50 705170 99 3461 685670 0.50 689131 100 3324 667792 0.50 671116 101 3352 650796 0.51 654148 102 3106 634421 0.49 637527 103 3137 620108 0.50 623245 104 3016 602920 0.50 605936 105 2912 589009 0.49 591921 106 2812 572724 0.49 575536 107 2834 557760 0.51 560594 108 2766 544314 0.51 547080 109 2648 530761 0.50 533409 110 2554 517345 0.49 519899 111 2567 503348 0.51 505915 112 2438 490552 0.49 492990 113 2369 478562 0.49 480931 114 2346 465066 0.50 467412 115 2216 452765 0.49 454981 116 2202 441016 0.50 443218 117 2141 428714 0.50 430855 118 2160 417908 0.51 420068 119 2110 407227 0.52 409337 120 2058 394268 0.52 396326 121 1940 385130 0.50 387070 122 1895 374257 0.50 376152 123 1856 364356 0.51 366212 124 1770 355073 0.50 356843 125 1760 345733 0.51 347493 126 1680 336780 0.50 338460 127 1652 326817 0.50 328469 128 1623 318041 0.51 319664 129 1552 309583 0.50 311135 130 1509 301730 0.50 303239 131 1479 292817 0.50 294296 132 1436 285076 0.50 286512 133 1447 277329 0.52 278776 134 1363 269105 0.50 270468 135 1404 262150 0.53 263554 136 1270 254828 0.50 256098 137 1315 248490 0.53 249805 138 1245 241539 0.51 242784 139 1234 234075 0.52 235309 140 1143 227528 0.50 228671 141 1189 221679 0.53 222868 142 1092 214900 0.51 215992 143 1134 209669 0.54 210803 144 1134 203539 0.55 204673 145 965 197147 0.49 198112 146 962 192080 0.50 193042 147 930 186337 0.50 187267 148 946 180258 0.52 181204 149 761 165249 0.46 166010 150 587 0 100.00 587