SRR18245583.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 43420711 lines in total Total number of methylation call strings processed: 86841422 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1450948401 Total methylated C's in CpG context: 22072976 Total methylated C's in CHG context: 7661815 Total methylated C's in CHH context: 31547805 Total C to T conversions in CpG context: 187035730 Total C to T conversions in CHG context: 254513030 Total C to T conversions in CHH context: 948117045 C methylated in CpG context: 10.6% C methylated in non-CpG context: 3.2%