SRR10065373.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 42970899 lines in total Total number of methylation call strings processed: 85941798 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1706937169 Total methylated C's in CpG context: 26060309 Total methylated C's in CHG context: 728784 Total methylated C's in CHH context: 2604228 Total C to T conversions in CpG context: 170864871 Total C to T conversions in CHG context: 275031240 Total C to T conversions in CHH context: 1231647737 C methylated in CpG context: 13.2% C methylated in non-CpG context: 0.2%