SRR10065372.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 36234918 lines in total Total number of methylation call strings processed: 72469836 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1471427698 Total methylated C's in CpG context: 22943356 Total methylated C's in CHG context: 633880 Total methylated C's in CHH context: 2303243 Total C to T conversions in CpG context: 148219199 Total C to T conversions in CHG context: 239605756 Total C to T conversions in CHH context: 1057722264 C methylated in CpG context: 13.4% C methylated in non-CpG context: 0.2%