SRR10065370.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 38031749 lines in total Total number of methylation call strings processed: 76063498 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1620120349 Total methylated C's in CpG context: 21222696 Total methylated C's in CHG context: 628037 Total methylated C's in CHH context: 2219013 Total C to T conversions in CpG context: 169586086 Total C to T conversions in CHG context: 265648848 Total C to T conversions in CHH context: 1160815669 C methylated in CpG context: 11.1% C methylated in non-CpG context: 0.2%