SRR10065369.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 34289746 lines in total Total number of methylation call strings processed: 68579492 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1433844574 Total methylated C's in CpG context: 19707801 Total methylated C's in CHG context: 558142 Total methylated C's in CHH context: 1984500 Total C to T conversions in CpG context: 147846657 Total C to T conversions in CHG context: 232072311 Total C to T conversions in CHH context: 1031675163 C methylated in CpG context: 11.8% C methylated in non-CpG context: 0.2%