SRR10065367.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 38929715 lines in total Total number of methylation call strings processed: 77859430 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1596667930 Total methylated C's in CpG context: 22811760 Total methylated C's in CHG context: 668732 Total methylated C's in CHH context: 2397496 Total C to T conversions in CpG context: 162143306 Total C to T conversions in CHG context: 258787971 Total C to T conversions in CHH context: 1149858665 C methylated in CpG context: 12.3% C methylated in non-CpG context: 0.2%