ERR13913499.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 45281920 lines in total Total number of methylation call strings processed: 90563840 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2005800815 Total methylated C's in CpG context: 27272651 Total methylated C's in CHG context: 1165577 Total methylated C's in CHH context: 4287454 Total C to T conversions in CpG context: 211858829 Total C to T conversions in CHG context: 331084566 Total C to T conversions in CHH context: 1430131738 C methylated in CpG context: 11.4% C methylated in non-CpG context: 0.3%