ERR13913498.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 51634596 lines in total Total number of methylation call strings processed: 103269192 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2332969696 Total methylated C's in CpG context: 31355122 Total methylated C's in CHG context: 1344895 Total methylated C's in CHH context: 4995177 Total C to T conversions in CpG context: 246437276 Total C to T conversions in CHG context: 384117411 Total C to T conversions in CHH context: 1664719815 C methylated in CpG context: 11.3% C methylated in non-CpG context: 0.3%