ERR13913495.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 53876186 lines in total Total number of methylation call strings processed: 107752372 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2411585907 Total methylated C's in CpG context: 32430050 Total methylated C's in CHG context: 1048680 Total methylated C's in CHH context: 3653356 Total C to T conversions in CpG context: 254159564 Total C to T conversions in CHG context: 396843181 Total C to T conversions in CHH context: 1723451076 C methylated in CpG context: 11.3% C methylated in non-CpG context: 0.2%