ERR13913493.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 47977508 lines in total Total number of methylation call strings processed: 95955016 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2170093058 Total methylated C's in CpG context: 29868376 Total methylated C's in CHG context: 939662 Total methylated C's in CHH context: 3233017 Total C to T conversions in CpG context: 226962488 Total C to T conversions in CHG context: 357850213 Total C to T conversions in CHH context: 1551239302 C methylated in CpG context: 11.6% C methylated in non-CpG context: 0.2%