ERR13913492.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 74698784 lines in total Total number of methylation call strings processed: 149397568 Final Cytosine Methylation Report ================================= Total number of C's analysed: 3380818409 Total methylated C's in CpG context: 44843355 Total methylated C's in CHG context: 1443574 Total methylated C's in CHH context: 5004301 Total C to T conversions in CpG context: 354934452 Total C to T conversions in CHG context: 556890634 Total C to T conversions in CHH context: 2417702093 C methylated in CpG context: 11.2% C methylated in non-CpG context: 0.2%