ERR13913486.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 51803923 lines in total Total number of methylation call strings processed: 103607846 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2281689408 Total methylated C's in CpG context: 29968787 Total methylated C's in CHG context: 1102273 Total methylated C's in CHH context: 3985192 Total C to T conversions in CpG context: 240168693 Total C to T conversions in CHG context: 374360115 Total C to T conversions in CHH context: 1632104348 C methylated in CpG context: 11.1% C methylated in non-CpG context: 0.3%