ERR13913483.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 55390902 lines in total Total number of methylation call strings processed: 110781804 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2482388905 Total methylated C's in CpG context: 33406830 Total methylated C's in CHG context: 1067834 Total methylated C's in CHH context: 3689150 Total C to T conversions in CpG context: 262092846 Total C to T conversions in CHG context: 409241540 Total C to T conversions in CHH context: 1772890705 C methylated in CpG context: 11.3% C methylated in non-CpG context: 0.2%