ERR13913477.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 59458909 lines in total Total number of methylation call strings processed: 118917818 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2664622901 Total methylated C's in CpG context: 35709574 Total methylated C's in CHG context: 1135246 Total methylated C's in CHH context: 3971455 Total C to T conversions in CpG context: 279914231 Total C to T conversions in CHG context: 438963934 Total C to T conversions in CHH context: 1904928461 C methylated in CpG context: 11.3% C methylated in non-CpG context: 0.2%