ERR13913472.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 61924494 lines in total Total number of methylation call strings processed: 123848988 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2819895807 Total methylated C's in CpG context: 38387274 Total methylated C's in CHG context: 1208076 Total methylated C's in CHH context: 4211504 Total C to T conversions in CpG context: 295271437 Total C to T conversions in CHG context: 464850587 Total C to T conversions in CHH context: 2015966929 C methylated in CpG context: 11.5% C methylated in non-CpG context: 0.2%