ERR13913466.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 48560942 lines in total Total number of methylation call strings processed: 97121884 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2065675773 Total methylated C's in CpG context: 25152506 Total methylated C's in CHG context: 889140 Total methylated C's in CHH context: 3212500 Total C to T conversions in CpG context: 218200081 Total C to T conversions in CHG context: 336001025 Total C to T conversions in CHH context: 1482220521 C methylated in CpG context: 10.3% C methylated in non-CpG context: 0.2%