ERR13913465.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 43534227 lines in total Total number of methylation call strings processed: 87068454 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1987757544 Total methylated C's in CpG context: 26911549 Total methylated C's in CHG context: 807112 Total methylated C's in CHH context: 2782333 Total C to T conversions in CpG context: 209493110 Total C to T conversions in CHG context: 328468187 Total C to T conversions in CHH context: 1419295253 C methylated in CpG context: 11.4% C methylated in non-CpG context: 0.2%